RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 DICER1Q9UPY3 1922 aaKnown RBP20.45■□□□□ 0.86
AP1S3-202ENST00000396653 LDHAL6AQ6ZMR3 332 aa20.45■□□□□ 0.86
AP1S3-202ENST00000396653 ZNF594Q96JF6 807 aaPredicted RBP20.45■□□□□ 0.86
AP1S3-202ENST00000396653 ZNF219Q9P2Y4 722 aaPredicted RBP20.45■□□□□ 0.86
AP1S3-202ENST00000396653 PSMD1Q99460 953 aa20.44■□□□□ 0.86
AP1S3-202ENST00000396653 CNNM1Q9NRU3 951 aa20.44■□□□□ 0.86
AP1S3-202ENST00000396653 PODXL2Q9NZ53 605 aa20.44■□□□□ 0.86
AP1S3-202ENST00000396653 MINPP1Q9UNW1 487 aa20.44■□□□□ 0.86
AP1S3-202ENST00000396653 CHD4Q14839 1912 aa20.44■□□□□ 0.86
AP1S3-202ENST00000396653 EYA2O00167 538 aa20.43■□□□□ 0.86
AP1S3-202ENST00000396653 CIAO1O76071 339 aa20.43■□□□□ 0.86
AP1S3-202ENST00000396653 OLFM4Q6UX06 510 aa20.43■□□□□ 0.86
AP1S3-202ENST00000396653 MPNDQ8N594 471 aa20.43■□□□□ 0.86
AP1S3-202ENST00000396653 ANKRD2Q9GZV1 360 aa20.43■□□□□ 0.86
AP1S3-202ENST00000396653 XDHP47989 1333 aa20.43■□□□□ 0.86
AP1S3-202ENST00000396653 NFKBIEO00221 500 aa20.42■□□□□ 0.86
AP1S3-202ENST00000396653 HMMRO75330 724 aa20.42■□□□□ 0.86
AP1S3-202ENST00000396653 FKBP4Q02790 459 aaKnown RBP eCLIP20.42■□□□□ 0.86
AP1S3-202ENST00000396653 SLC51AQ86UW1 340 aa20.42■□□□□ 0.86
AP1S3-202ENST00000396653 KLHDC4Q8TBB5 520 aa20.42■□□□□ 0.86
AP1S3-202ENST00000396653 RTFDC1Q9BY42 306 aaPredicted RBP20.42■□□□□ 0.86
AP1S3-202ENST00000396653 TAOK3Q9H2K8 898 aa20.42■□□□□ 0.86
AP1S3-202ENST00000396653 RIPOR2Q9Y4F9 1068 aa20.42■□□□□ 0.86
AP1S3-202ENST00000396653 MROH5Q6ZUA9 1318 aa20.42■□□□□ 0.86
AP1S3-202ENST00000396653 CHRNDQ07001 517 aa20.41■□□□□ 0.86
AP1S3-202ENST00000396653 DPP8Q6V1X1 898 aaPredicted RBP20.41■□□□□ 0.86
AP1S3-202ENST00000396653 ARHGAP27Q6ZUM4 889 aa20.41■□□□□ 0.86
AP1S3-202ENST00000396653 SUPT20HQ8NEM7 779 aa20.41■□□□□ 0.86
AP1S3-202ENST00000396653 EXOC6Q8TAG9 804 aa20.41■□□□□ 0.86
AP1S3-202ENST00000396653 GPSM2P81274 684 aa20.4■□□□□ 0.86
AP1S3-202ENST00000396653 PUS3Q9BZE2 481 aaKnown RBP20.4■□□□□ 0.86
AP1S3-202ENST00000396653 NSFL1CQ9UNZ2 370 aaKnown RBP20.4■□□□□ 0.86
AP1S3-202ENST00000396653 PA2G4Q9UQ80 394 aaKnown RBP20.4■□□□□ 0.86
AP1S3-202ENST00000396653 TIAM2Q8IVF5 1701 aa20.39■□□□□ 0.86
AP1S3-202ENST00000396653 ATP2B4P23634 1241 aa20.39■□□□□ 0.85
AP1S3-202ENST00000396653 IL15P40933 162 aaPredicted RBP20.39■□□□□ 0.85
AP1S3-202ENST00000396653 LRRC24Q50LG9 513 aa20.39■□□□□ 0.85
AP1S3-202ENST00000396653 ATG9AQ7Z3C6 839 aa20.39■□□□□ 0.85
AP1S3-202ENST00000396653 SIRT2Q8IXJ6 389 aa20.39■□□□□ 0.85
AP1S3-202ENST00000396653 VPS33BQ9H267 617 aa20.39■□□□□ 0.85
AP1S3-202ENST00000396653 ANKIB1Q9P2G1 1089 aa20.39■□□□□ 0.85
AP1S3-202ENST00000396653 LEMD3Q9Y2U8 911 aa20.39■□□□□ 0.85
AP1S3-202ENST00000396653 NOP58Q9Y2X3 529 aaKnown RBP20.39■□□□□ 0.85
AP1S3-202ENST00000396653 ARAP2Q8WZ64 1704 aa20.39■□□□□ 0.85
AP1S3-202ENST00000396653 GGA1Q9UJY5 639 aa20.38■□□□□ 0.85
AP1S3-202ENST00000396653 IRX6P78412 446 aaPredicted RBP20.37■□□□□ 0.85
AP1S3-202ENST00000396653 RASSF7Q02833 373 aa20.37■□□□□ 0.85
AP1S3-202ENST00000396653 VGLL2Q8N8G2 317 aa20.37■□□□□ 0.85
AP1S3-202ENST00000396653 TBC1D16Q8TBP0 767 aa20.37■□□□□ 0.85
AP1S3-202ENST00000396653 SIL1Q9H173 461 aa20.37■□□□□ 0.85
AP1S3-202ENST00000396653 PCDHB15Q9Y5E8 787 aa20.37■□□□□ 0.85
AP1S3-202ENST00000396653 UFL1O94874 794 aa20.36■□□□□ 0.85
AP1S3-202ENST00000396653 G3BP1Q13283 466 aaKnown RBP eCLIP20.36■□□□□ 0.85
AP1S3-202ENST00000396653 METTL24Q5JXM2 366 aa20.36■□□□□ 0.85
AP1S3-202ENST00000396653 EYA3Q99504 573 aa20.36■□□□□ 0.85
AP1S3-202ENST00000396653 POLLQ9UGP5 575 aa20.36■□□□□ 0.85
AP1S3-202ENST00000396653 MED23Q9ULK4 1368 aa20.35■□□□□ 0.85
AP1S3-202ENST00000396653 SURF6O75683 361 aaKnown RBP20.35■□□□□ 0.85
AP1S3-202ENST00000396653 PDE8BO95263 885 aa20.35■□□□□ 0.85
AP1S3-202ENST00000396653 LMNB1P20700 586 aa20.35■□□□□ 0.85
AP1S3-202ENST00000396653 HSP90AB4PQ58FF6 505 aa20.35■□□□□ 0.85
AP1S3-202ENST00000396653 ZNF804BA4D1E1 1349 aa20.34■□□□□ 0.85
AP1S3-202ENST00000396653 IARSP41252 1262 aaKnown RBP20.34■□□□□ 0.85
AP1S3-202ENST00000396653 UBE4AQ14139 1066 aa20.34■□□□□ 0.85
AP1S3-202ENST00000396653 CEP126Q9P2H0 1117 aa20.34■□□□□ 0.85
AP1S3-202ENST00000396653 PSME4Q14997 1843 aa20.33■□□□□ 0.85
AP1S3-202ENST00000396653 C6orf229H3BNL8 230 aa20.33■□□□□ 0.85
AP1S3-202ENST00000396653 TAF5LO75529 589 aa20.33■□□□□ 0.85
AP1S3-202ENST00000396653 NEFLP07196 543 aa20.33■□□□□ 0.85
AP1S3-202ENST00000396653 KCNJ4P48050 445 aa20.33■□□□□ 0.85
AP1S3-202ENST00000396653 KIAA2012Q0VF49 1180 aa20.33■□□□□ 0.85
AP1S3-202ENST00000396653 C15orf52Q6ZUT6 534 aaKnown RBP20.33■□□□□ 0.85
AP1S3-202ENST00000396653 ERC1Q8IUD2 1116 aa20.33■□□□□ 0.85
AP1S3-202ENST00000396653 HELBQ8NG08 1087 aaPredicted RBP20.33■□□□□ 0.85
AP1S3-202ENST00000396653 ZNF277Q9NRM2 450 aaPredicted RBP20.33■□□□□ 0.85
AP1S3-202ENST00000396653 GOLGB1Q14789 3259 aaKnown RBP20.33■□□□□ 0.84
AP1S3-202ENST00000396653 PRELPP51888 382 aa20.32■□□□□ 0.84
AP1S3-202ENST00000396653 OS9Q13438 667 aaPredicted RBP20.32■□□□□ 0.84
AP1S3-202ENST00000396653 HDAC1Q13547 482 aaPredicted RBP20.32■□□□□ 0.84
AP1S3-202ENST00000396653 PUM3Q15397 648 aaKnown RBP20.32■□□□□ 0.84
AP1S3-202ENST00000396653 WASHC4Q2M389 1173 aa20.32■□□□□ 0.84
AP1S3-202ENST00000396653 ZC3H4Q9UPT8 1303 aaKnown RBP20.31■□□□□ 0.84
AP1S3-202ENST00000396653 IRS2Q9Y4H2 1338 aa20.31■□□□□ 0.84
AP1S3-202ENST00000396653 PPIP5K2O43314 1243 aa20.31■□□□□ 0.84
AP1S3-202ENST00000396653 RAB11FIP3O75154 756 aa20.31■□□□□ 0.84
AP1S3-202ENST00000396653 FGFR2P21802 821 aa20.31■□□□□ 0.84
AP1S3-202ENST00000396653 EXOC6BQ9Y2D4 811 aa20.31■□□□□ 0.84
AP1S3-202ENST00000396653 COL4A5P29400 1685 aa20.31■□□□□ 0.84
AP1S3-202ENST00000396653 ZNF609O15014 1411 aa20.3■□□□□ 0.84
AP1S3-202ENST00000396653 SASH1O94885 1247 aa20.3■□□□□ 0.84
AP1S3-202ENST00000396653 AOC3Q16853 763 aa20.3■□□□□ 0.84
AP1S3-202ENST00000396653 LARGE2Q8N3Y3 721 aa20.3■□□□□ 0.84
AP1S3-202ENST00000396653 ZC3H12CQ9C0D7 883 aaKnown RBP20.3■□□□□ 0.84
AP1S3-202ENST00000396653 DCTPP1Q9H773 170 aa20.3■□□□□ 0.84
AP1S3-202ENST00000396653 GPR108Q9NPR9 543 aa20.3■□□□□ 0.84
AP1S3-202ENST00000396653 RNF181Q9P0P0 153 aa20.3■□□□□ 0.84
AP1S3-202ENST00000396653 AKAP2Q9Y2D5 859 aa20.3■□□□□ 0.84
AP1S3-202ENST00000396653 MYH13Q9UKX3 1938 aa20.29■□□□□ 0.84
AP1S3-202ENST00000396653 TFCP2Q12800 502 aa20.29■□□□□ 0.84
AP1S3-202ENST00000396653 C9orf131Q5VYM1 1079 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms