RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 NUTM2EB1AL46 878 aaPredicted RBP15.86■□□□□ 0.13
COL4A3-202ENST00000396578 NBPF8Q3BBV2 869 aa15.86■□□□□ 0.13
COL4A3-202ENST00000396578 CCDC14Q49A88 953 aa15.86■□□□□ 0.13
COL4A3-202ENST00000396578 NUTM2AQ8IVF1 878 aaPredicted RBP15.86■□□□□ 0.13
COL4A3-202ENST00000396578 USP48Q86UV5 1035 aa15.86■□□□□ 0.13
COL4A3-202ENST00000396578 ARFGAP2Q8N6H7 521 aa15.86■□□□□ 0.13
COL4A3-202ENST00000396578 THUMPD2Q9BTF0 503 aaKnown RBP15.86■□□□□ 0.13
COL4A3-202ENST00000396578 CCDC184Q52MB2 194 aa15.86■□□□□ 0.13
COL4A3-202ENST00000396578 CCDC186Q7Z3E2 898 aa15.86■□□□□ 0.13
COL4A3-202ENST00000396578 CCDC50Q8IVM0 306 aa15.86■□□□□ 0.13
COL4A3-202ENST00000396578 ZKSCAN5Q9Y2L8 839 aa15.86■□□□□ 0.13
COL4A3-202ENST00000396578 PTCD1O75127 700 aaKnown RBP15.85■□□□□ 0.13
COL4A3-202ENST00000396578 NAA25Q14CX7 972 aa15.85■□□□□ 0.13
COL4A3-202ENST00000396578 RGS22Q8NE09 1264 aa15.85■□□□□ 0.13
COL4A3-202ENST00000396578 CAPZA3Q96KX2 299 aa15.85■□□□□ 0.13
COL4A3-202ENST00000396578 CFAP157Q5JU67 520 aa15.85■□□□□ 0.13
COL4A3-202ENST00000396578 B4GALNT4Q76KP1 1039 aa15.85■□□□□ 0.13
COL4A3-202ENST00000396578 SEC62Q99442 399 aaKnown RBP15.85■□□□□ 0.13
COL4A3-202ENST00000396578 TRIM27P14373 513 aa15.85■□□□□ 0.13
COL4A3-202ENST00000396578 TRMT1LQ7Z2T5 733 aaKnown RBP15.85■□□□□ 0.13
COL4A3-202ENST00000396578 HSP90AA4PQ58FG1 418 aa15.85■□□□□ 0.13
COL4A3-202ENST00000396578 KIAA1524Q8TCG1 905 aa15.85■□□□□ 0.13
COL4A3-202ENST00000396578 MTRF1LQ9UGC7 380 aaKnown RBP15.85■□□□□ 0.13
COL4A3-202ENST00000396578 F6X3S4 739 aa15.85■□□□□ 0.13
COL4A3-202ENST00000396578 RAD54L2Q9Y4B4 1467 aa15.85■□□□□ 0.13
COL4A3-202ENST00000396578 TMEM110-MUSTN1A8MSY1 372 aa15.85■□□□□ 0.13
COL4A3-202ENST00000396578 MIPOL1Q8TD10 442 aa15.85■□□□□ 0.13
COL4A3-202ENST00000396578 MRVI1Q9Y6F6 885 aa15.85■□□□□ 0.13
COL4A3-202ENST00000396578 PHACTR2O75167 634 aa15.84■□□□□ 0.13
COL4A3-202ENST00000396578 GMNNO75496 209 aa15.84■□□□□ 0.13
COL4A3-202ENST00000396578 MRPS27Q92552 414 aaKnown RBP15.84■□□□□ 0.13
COL4A3-202ENST00000396578 RASSF4Q9H2L5 321 aa15.84■□□□□ 0.13
COL4A3-202ENST00000396578 SWAP70Q9UH65 585 aa15.84■□□□□ 0.13
COL4A3-202ENST00000396578 RTL1A6NKG5 1358 aa15.84■□□□□ 0.13
COL4A3-202ENST00000396578 C10orf67Q8IYJ2 551 aa15.84■□□□□ 0.13
COL4A3-202ENST00000396578 RPUSD2Q8IZ73 545 aaKnown RBP15.84■□□□□ 0.13
COL4A3-202ENST00000396578 AFAP1Q8N556 730 aa15.84■□□□□ 0.13
COL4A3-202ENST00000396578 TMX3Q96JJ7 454 aa15.84■□□□□ 0.13
COL4A3-202ENST00000396578 HAND2P61296 217 aa15.84■□□□□ 0.13
COL4A3-202ENST00000396578 WTAPQ15007 396 aa15.84■□□□□ 0.13
COL4A3-202ENST00000396578 IFT74Q96LB3 600 aa15.84■□□□□ 0.13
COL4A3-202ENST00000396578 KRT23Q9C075 422 aa15.84■□□□□ 0.13
COL4A3-202ENST00000396578 DBF4Q9UBU7 674 aaPredicted RBP15.84■□□□□ 0.13
COL4A3-202ENST00000396578 TRMT112Q9UI30 125 aaKnown RBP15.84■□□□□ 0.13
COL4A3-202ENST00000396578 CIB2O75838 187 aa15.84■□□□□ 0.13
COL4A3-202ENST00000396578 EEF2P13639 858 aaKnown RBP15.84■□□□□ 0.13
COL4A3-202ENST00000396578 ATP5DP30049 168 aa15.84■□□□□ 0.13
COL4A3-202ENST00000396578 IFT81Q8WYA0 676 aa15.84■□□□□ 0.13
COL4A3-202ENST00000396578 KCNK9Q9NPC2 374 aa15.84■□□□□ 0.13
COL4A3-202ENST00000396578 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.84■□□□□ 0.13
COL4A3-202ENST00000396578 IGF1RP08069 1367 aa15.83■□□□□ 0.13
COL4A3-202ENST00000396578 HLA-DOAP06340 250 aa15.83■□□□□ 0.13
COL4A3-202ENST00000396578 IFIT1BQ5T764 474 aaKnown RBP15.83■□□□□ 0.13
COL4A3-202ENST00000396578 HS1BP3Q53T59 392 aa15.83■□□□□ 0.13
COL4A3-202ENST00000396578 DNAJC21Q5F1R6 531 aaKnown RBP15.83■□□□□ 0.13
COL4A3-202ENST00000396578 ALG1Q9BT22 464 aa15.83■□□□□ 0.13
COL4A3-202ENST00000396578 BICDL2A1A5D9 508 aa15.83■□□□□ 0.12
COL4A3-202ENST00000396578 MYCNP04198 464 aaPredicted RBP15.83■□□□□ 0.12
COL4A3-202ENST00000396578 SMIM23A6NLE4 172 aa15.83■□□□□ 0.12
COL4A3-202ENST00000396578 ARID5AQ03989 594 aa15.83■□□□□ 0.12
COL4A3-202ENST00000396578 TMTC2Q8N394 836 aa15.83■□□□□ 0.12
COL4A3-202ENST00000396578 PPFIBP2Q8ND30 876 aa15.83■□□□□ 0.12
COL4A3-202ENST00000396578 CCDC42Q96M95 316 aa15.83■□□□□ 0.12
COL4A3-202ENST00000396578 CAMSAP2Q08AD1 1489 aa15.83■□□□□ 0.12
COL4A3-202ENST00000396578 PPP1R7Q15435 360 aa15.83■□□□□ 0.12
COL4A3-202ENST00000396578 OGFRQ9NZT2 677 aa15.83■□□□□ 0.12
COL4A3-202ENST00000396578 A0A1B0GUA9 196 aa15.83■□□□□ 0.12
COL4A3-202ENST00000396578 ZBTB43O43298 467 aa15.83■□□□□ 0.12
COL4A3-202ENST00000396578 INTS8Q75QN2 995 aaKnown RBP15.83■□□□□ 0.12
COL4A3-202ENST00000396578 IMPG2Q9BZV3 1241 aa15.83■□□□□ 0.12
COL4A3-202ENST00000396578 EPRSP07814 1512 aaKnown RBP15.83■□□□□ 0.12
COL4A3-202ENST00000396578 PTPN23Q9H3S7 1636 aa15.82■□□□□ 0.12
COL4A3-202ENST00000396578 UBXN1Q04323 297 aa15.82■□□□□ 0.12
COL4A3-202ENST00000396578 NEK11Q8NG66 645 aa15.82■□□□□ 0.12
COL4A3-202ENST00000396578 SNX16P57768 344 aa15.82■□□□□ 0.12
COL4A3-202ENST00000396578 MAP3K2Q9Y2U5 619 aa15.82■□□□□ 0.12
COL4A3-202ENST00000396578 UBLCP1Q8WVY7 318 aaPredicted RBP15.82■□□□□ 0.12
COL4A3-202ENST00000396578 A0A1B0GUL7 405 aa15.82■□□□□ 0.12
COL4A3-202ENST00000396578 CCDC25Q86WR0 208 aa15.82■□□□□ 0.12
COL4A3-202ENST00000396578 DNAJC25Q9H1X3 360 aa15.82■□□□□ 0.12
COL4A3-202ENST00000396578 GBP1P32455 592 aa15.81■□□□□ 0.12
COL4A3-202ENST00000396578 TTLL12Q14166 644 aaPredicted RBP15.81■□□□□ 0.12
COL4A3-202ENST00000396578 CACNA2D3Q8IZS8 1091 aa15.81■□□□□ 0.12
COL4A3-202ENST00000396578 CNNM2Q9H8M5 875 aa15.81■□□□□ 0.12
COL4A3-202ENST00000396578 GUCA1BQ9UMX6 200 aa15.81■□□□□ 0.12
COL4A3-202ENST00000396578 SKAP1Q86WV1 359 aa15.81■□□□□ 0.12
COL4A3-202ENST00000396578 RTN1Q16799 776 aa15.81■□□□□ 0.12
COL4A3-202ENST00000396578 RHOXF2BP0C7M4 288 aa15.81■□□□□ 0.12
COL4A3-202ENST00000396578 PLCB3Q01970 1234 aa15.81■□□□□ 0.12
COL4A3-202ENST00000396578 TYRO3Q06418 890 aa15.81■□□□□ 0.12
COL4A3-202ENST00000396578 NUDT16Q96DE0 195 aaKnown RBP15.81■□□□□ 0.12
COL4A3-202ENST00000396578 RHOXF2Q9BQY4 288 aa15.81■□□□□ 0.12
COL4A3-202ENST00000396578 TNNC1P63316 161 aa15.81■□□□□ 0.12
COL4A3-202ENST00000396578 FLIIQ13045 1269 aa15.81■□□□□ 0.12
COL4A3-202ENST00000396578 KRBA2Q6ZNG9 492 aa15.81■□□□□ 0.12
COL4A3-202ENST00000396578 CEP120Q8N960 986 aa15.81■□□□□ 0.12
COL4A3-202ENST00000396578 CRNKL1Q9BZJ0 848 aaKnown RBP15.81■□□□□ 0.12
COL4A3-202ENST00000396578 KLF18A0A0U1RQI7 1052 aa15.81■□□□□ 0.12
COL4A3-202ENST00000396578 CCDC61Q9Y6R9 512 aa15.81■□□□□ 0.12
COL4A3-202ENST00000396578 ASIC1P78348 528 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms