RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 TBC1D10BQ4KMP7 808 aaPredicted RBP22.7■■□□□ 1.22
EXOSC3-202ENST00000396521 DCAF8Q5TAQ9 597 aa22.7■■□□□ 1.22
EXOSC3-202ENST00000396521 RIC3Q7Z5B4 369 aa22.7■■□□□ 1.22
EXOSC3-202ENST00000396521 SULF1Q8IWU6 871 aa22.7■■□□□ 1.22
EXOSC3-202ENST00000396521 MCOLN1Q9GZU1 580 aa22.7■■□□□ 1.22
EXOSC3-202ENST00000396521 LAMB2P55268 1798 aa22.69■■□□□ 1.22
EXOSC3-202ENST00000396521 LRRC37AA6NMS7 1700 aa22.69■■□□□ 1.22
EXOSC3-202ENST00000396521 SHTN1A0MZ66 631 aa22.69■■□□□ 1.22
EXOSC3-202ENST00000396521 REM2Q8IYK8 340 aaPredicted RBP22.69■■□□□ 1.22
EXOSC3-202ENST00000396521 CCDC152Q4G0S7 254 aa22.68■■□□□ 1.22
EXOSC3-202ENST00000396521 CCDC191Q8NCU4 936 aa22.68■■□□□ 1.22
EXOSC3-202ENST00000396521 DOK7Q18PE1 504 aa22.67■■□□□ 1.22
EXOSC3-202ENST00000396521 KIF4BQ2VIQ3 1234 aa22.67■■□□□ 1.22
EXOSC3-202ENST00000396521 AGBL3Q8NEM8 1001 aa22.67■■□□□ 1.22
EXOSC3-202ENST00000396521 ANKIB1Q9P2G1 1089 aa22.67■■□□□ 1.22
EXOSC3-202ENST00000396521 GGA1Q9UJY5 639 aa22.67■■□□□ 1.22
EXOSC3-202ENST00000396521 DGKZQ13574 1117 aa22.66■■□□□ 1.22
EXOSC3-202ENST00000396521 ADAMTS8Q9UP79 889 aa22.66■■□□□ 1.22
EXOSC3-202ENST00000396521 ZNF609O15014 1411 aa22.65■■□□□ 1.22
EXOSC3-202ENST00000396521 RTL9Q8NET4 1388 aa22.65■■□□□ 1.22
EXOSC3-202ENST00000396521 FAM155AB1AL88 458 aaPredicted RBP22.65■■□□□ 1.22
EXOSC3-202ENST00000396521 ZNF157P51786 506 aaPredicted RBP22.65■■□□□ 1.22
EXOSC3-202ENST00000396521 FKBP1BP68106 108 aa22.65■■□□□ 1.22
EXOSC3-202ENST00000396521 RTL5Q5HYW3 569 aaPredicted RBP22.65■■□□□ 1.22
EXOSC3-202ENST00000396521 RBM26Q5T8P6 1007 aaKnown RBP22.65■■□□□ 1.22
EXOSC3-202ENST00000396521 MBIPQ9NS73 344 aa22.65■■□□□ 1.22
EXOSC3-202ENST00000396521 IFT57Q9NWB7 429 aa22.65■■□□□ 1.22
EXOSC3-202ENST00000396521 PDE8AO60658 829 aa22.64■■□□□ 1.21
EXOSC3-202ENST00000396521 UFL1O94874 794 aa22.64■■□□□ 1.21
EXOSC3-202ENST00000396521 DDX58O95786 925 aaKnown RBP22.64■■□□□ 1.21
EXOSC3-202ENST00000396521 PCCAP05165 728 aaPredicted RBP22.64■■□□□ 1.21
EXOSC3-202ENST00000396521 ZNF853P0CG23 659 aa22.64■■□□□ 1.21
EXOSC3-202ENST00000396521 ZNF280AP59817 542 aaPredicted RBP22.64■■□□□ 1.21
EXOSC3-202ENST00000396521 GNAI1P63096 354 aa22.64■■□□□ 1.21
EXOSC3-202ENST00000396521 KCNQ5Q9NR82 932 aa22.64■■□□□ 1.21
EXOSC3-202ENST00000396521 SLC34A2O95436 690 aa22.63■■□□□ 1.21
EXOSC3-202ENST00000396521 EGFRP00533 1210 aa22.63■■□□□ 1.21
EXOSC3-202ENST00000396521 ADM5C9JUS6 153 aa22.62■■□□□ 1.21
EXOSC3-202ENST00000396521 KIF23Q02241 960 aaPredicted RBP22.62■■□□□ 1.21
EXOSC3-202ENST00000396521 RSBN1LQ6PCB5 846 aaPredicted RBP22.62■■□□□ 1.21
EXOSC3-202ENST00000396521 PODNQ7Z5L7 613 aa22.62■■□□□ 1.21
EXOSC3-202ENST00000396521 ZNF428Q96B54 188 aa22.62■■□□□ 1.21
EXOSC3-202ENST00000396521 ZIC5Q96T25 663 aa22.62■■□□□ 1.21
EXOSC3-202ENST00000396521 CWC25Q9NXE8 425 aaPredicted RBP22.62■■□□□ 1.21
EXOSC3-202ENST00000396521 GGA3Q9NZ52 723 aa22.62■■□□□ 1.21
EXOSC3-202ENST00000396521 DDX60Q8IY21 1712 aaKnown RBP22.62■■□□□ 1.21
EXOSC3-202ENST00000396521 XDHP47989 1333 aa22.61■■□□□ 1.21
EXOSC3-202ENST00000396521 DDX10Q13206 875 aaKnown RBP22.61■■□□□ 1.21
EXOSC3-202ENST00000396521 PITPNM2Q9BZ72 1349 aa22.6■■□□□ 1.21
EXOSC3-202ENST00000396521 SLC10A3P09131 477 aa22.6■■□□□ 1.21
EXOSC3-202ENST00000396521 ATP2B4P23634 1241 aa22.6■■□□□ 1.21
EXOSC3-202ENST00000396521 MMP14P50281 582 aa22.6■■□□□ 1.21
EXOSC3-202ENST00000396521 ANKRD18AQ8IVF6 992 aa22.6■■□□□ 1.21
EXOSC3-202ENST00000396521 SEC31BQ9NQW1 1179 aa22.6■■□□□ 1.21
EXOSC3-202ENST00000396521 USP17L8P0C7I0 530 aa22.59■■□□□ 1.21
EXOSC3-202ENST00000396521 CCDC30Q5VVM6 783 aa22.59■■□□□ 1.21
EXOSC3-202ENST00000396521 CDC5LQ99459 802 aaKnown RBP22.59■■□□□ 1.21
EXOSC3-202ENST00000396521 MYD88Q99836 296 aa22.59■■□□□ 1.21
EXOSC3-202ENST00000396521 METTL22Q9BUU2 404 aaPredicted RBP22.59■■□□□ 1.21
EXOSC3-202ENST00000396521 USP17L3A6NCW0 530 aa22.58■■□□□ 1.21
EXOSC3-202ENST00000396521 USP17L4A6NCW7 530 aa22.58■■□□□ 1.21
EXOSC3-202ENST00000396521 SCARF1Q14162 830 aa22.58■■□□□ 1.21
EXOSC3-202ENST00000396521 DLK2Q6UY11 383 aa22.58■■□□□ 1.21
EXOSC3-202ENST00000396521 USP17L1Q7RTZ2 530 aa22.58■■□□□ 1.21
EXOSC3-202ENST00000396521 CDCA5Q96FF9 252 aa22.58■■□□□ 1.21
EXOSC3-202ENST00000396521 PHAXQ9H814 394 aaKnown RBP22.58■■□□□ 1.21
EXOSC3-202ENST00000396521 RNF186Q9NXI6 227 aa22.58■■□□□ 1.21
EXOSC3-202ENST00000396521 TAF1P21675 1872 aa22.58■■□□□ 1.2
EXOSC3-202ENST00000396521 CSRNP1Q96S65 589 aa22.57■■□□□ 1.2
EXOSC3-202ENST00000396521 GMLQ99445 158 aa22.57■■□□□ 1.2
EXOSC3-202ENST00000396521 MYOZ2Q9NPC6 264 aa22.57■■□□□ 1.2
EXOSC3-202ENST00000396521 TRPA1O75762 1119 aa22.56■■□□□ 1.2
EXOSC3-202ENST00000396521 ANGEL2Q5VTE6 544 aaKnown RBP22.56■■□□□ 1.2
EXOSC3-202ENST00000396521 CASP8AP2Q9UKL3 1982 aa22.56■■□□□ 1.2
EXOSC3-202ENST00000396521 OGFOD1Q8N543 542 aa22.55■■□□□ 1.2
EXOSC3-202ENST00000396521 APAF1O14727 1248 aa22.54■■□□□ 1.2
EXOSC3-202ENST00000396521 BSDC1Q9NW68 430 aaPredicted RBP22.54■■□□□ 1.2
EXOSC3-202ENST00000396521 MYO3BQ8WXR4 1341 aa22.54■■□□□ 1.2
EXOSC3-202ENST00000396521 ELL2O00472 640 aaPredicted RBP22.53■■□□□ 1.2
EXOSC3-202ENST00000396521 CTSWP56202 376 aa22.53■■□□□ 1.2
EXOSC3-202ENST00000396521 NEXNQ0ZGT2 675 aa22.53■■□□□ 1.2
EXOSC3-202ENST00000396521 PKN2Q16513 984 aaKnown RBP22.52■■□□□ 1.2
EXOSC3-202ENST00000396521 KSR2Q6VAB6 950 aa22.52■■□□□ 1.2
EXOSC3-202ENST00000396521 CTU1Q7Z7A3 348 aaKnown RBP22.52■■□□□ 1.2
EXOSC3-202ENST00000396521 RASAL3Q86YV0 1011 aa22.52■■□□□ 1.2
EXOSC3-202ENST00000396521 MED23Q9ULK4 1368 aa22.51■■□□□ 1.19
EXOSC3-202ENST00000396521 C8orf58Q8NAV2 365 aa22.51■■□□□ 1.19
EXOSC3-202ENST00000396521 PRKRIP1Q9H875 184 aaPredicted RBP22.51■■□□□ 1.19
EXOSC3-202ENST00000396521 MAP3K2Q9Y2U5 619 aa22.51■■□□□ 1.19
EXOSC3-202ENST00000396521 ASTN2O75129 1339 aaPredicted RBP22.51■■□□□ 1.19
EXOSC3-202ENST00000396521 NF2P35240 595 aa22.5■■□□□ 1.19
EXOSC3-202ENST00000396521 STRIP1Q5VSL9 837 aa22.5■■□□□ 1.19
EXOSC3-202ENST00000396521 TTLL11Q8NHH1 800 aa22.5■■□□□ 1.19
EXOSC3-202ENST00000396521 STK31Q9BXU1 1019 aa22.5■■□□□ 1.19
EXOSC3-202ENST00000396521 COA1Q9GZY4 146 aa22.5■■□□□ 1.19
EXOSC3-202ENST00000396521 MINPP1Q9UNW1 487 aa22.5■■□□□ 1.19
EXOSC3-202ENST00000396521 LEMD3Q9Y2U8 911 aa22.5■■□□□ 1.19
EXOSC3-202ENST00000396521 CCDC85AQ96PX6 553 aaPredicted RBP22.49■■□□□ 1.19
EXOSC3-202ENST00000396521 COL4A1P02462 1669 aa22.49■■□□□ 1.19
EXOSC3-202ENST00000396521 POLR2AP24928 1970 aaKnown RBP22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms