RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 PODXL2Q9NZ53 605 aa23.41■■□□□ 1.34
FXN-203ENST00000396366 ZBTB12Q9Y330 459 aaPredicted RBP23.41■■□□□ 1.34
FXN-203ENST00000396366 CACNA1FO60840 1977 aa23.4■■□□□ 1.34
FXN-203ENST00000396366 ANKRD18AQ8IVF6 992 aa23.4■■□□□ 1.34
FXN-203ENST00000396366 MYH16Q9H6N6 1097 aa23.4■■□□□ 1.34
FXN-203ENST00000396366 F6X3S4 739 aa23.39■■□□□ 1.33
FXN-203ENST00000396366 TRAF5O00463 557 aa23.39■■□□□ 1.33
FXN-203ENST00000396366 PSMD14O00487 310 aa23.39■■□□□ 1.33
FXN-203ENST00000396366 ECE2O60344 883 aa23.39■■□□□ 1.33
FXN-203ENST00000396366 UFL1O94874 794 aa23.39■■□□□ 1.33
FXN-203ENST00000396366 HIRAP54198 1017 aaPredicted RBP23.39■■□□□ 1.33
FXN-203ENST00000396366 EYA3Q99504 573 aa23.39■■□□□ 1.33
FXN-203ENST00000396366 CNOT7Q9UIV1 285 aaKnown RBP23.39■■□□□ 1.33
FXN-203ENST00000396366 MYH3P11055 1940 aa23.39■■□□□ 1.33
FXN-203ENST00000396366 CASP7P55210 303 aa23.38■■□□□ 1.33
FXN-203ENST00000396366 ZC3H12CQ9C0D7 883 aaKnown RBP23.38■■□□□ 1.33
FXN-203ENST00000396366 RTL9Q8NET4 1388 aa23.38■■□□□ 1.33
FXN-203ENST00000396366 SPEF2Q9C093 1822 aa23.38■■□□□ 1.33
FXN-203ENST00000396366 ZNF521Q96K83 1311 aa23.37■■□□□ 1.33
FXN-203ENST00000396366 LINS1Q8NG48 757 aa23.37■■□□□ 1.33
FXN-203ENST00000396366 TRPM4Q8TD43 1214 aa23.37■■□□□ 1.33
FXN-203ENST00000396366 GGA1Q9UJY5 639 aa23.37■■□□□ 1.33
FXN-203ENST00000396366 CNTNAP1P78357 1384 aa23.37■■□□□ 1.33
FXN-203ENST00000396366 SCN9AQ15858 1988 aa23.36■■□□□ 1.33
FXN-203ENST00000396366 MICALL2Q8IY33 904 aa23.36■■□□□ 1.33
FXN-203ENST00000396366 CDC5LQ99459 802 aaKnown RBP23.36■■□□□ 1.33
FXN-203ENST00000396366 HSPA1AP0DMV8 641 aaKnown RBP23.35■■□□□ 1.33
FXN-203ENST00000396366 HSPA1BP0DMV9 641 aaKnown RBP23.35■■□□□ 1.33
FXN-203ENST00000396366 VEGFBP49765 207 aa23.35■■□□□ 1.33
FXN-203ENST00000396366 SAMD7Q7Z3H4 446 aa23.34■■□□□ 1.33
FXN-203ENST00000396366 MINPP1Q9UNW1 487 aa23.34■■□□□ 1.33
FXN-203ENST00000396366 XDHP47989 1333 aa23.33■■□□□ 1.33
FXN-203ENST00000396366 H7C1D1 291 aa23.33■■□□□ 1.33
FXN-203ENST00000396366 EGFRP00533 1210 aa23.33■■□□□ 1.33
FXN-203ENST00000396366 BEND3Q5T5X7 828 aa23.33■■□□□ 1.33
FXN-203ENST00000396366 IFFO2Q5TF58 517 aa23.33■■□□□ 1.33
FXN-203ENST00000396366 CST9Q5W186 159 aa23.33■■□□□ 1.33
FXN-203ENST00000396366 PLA2G12BQ9BX93 195 aa23.33■■□□□ 1.33
FXN-203ENST00000396366 GLIS2Q9BZE0 524 aaPredicted RBP23.33■■□□□ 1.33
FXN-203ENST00000396366 BSDC1Q9NW68 430 aaPredicted RBP23.33■■□□□ 1.33
FXN-203ENST00000396366 PGAP2Q9UHJ9 254 aa23.33■■□□□ 1.33
FXN-203ENST00000396366 G3V3G9 751 aa23.32■■□□□ 1.32
FXN-203ENST00000396366 CSF1RP07333 972 aa23.32■■□□□ 1.32
FXN-203ENST00000396366 FAM161AQ3B820 660 aa23.32■■□□□ 1.32
FXN-203ENST00000396366 DCAF8Q5TAQ9 597 aa23.32■■□□□ 1.32
FXN-203ENST00000396366 COL13A1Q5TAT6 717 aaPredicted RBP23.32■■□□□ 1.32
FXN-203ENST00000396366 DPF2Q92785 391 aa23.32■■□□□ 1.32
FXN-203ENST00000396366 ABT1Q9ULW3 272 aaKnown RBP23.32■■□□□ 1.32
FXN-203ENST00000396366 ITGA6P23229 1130 aa23.31■■□□□ 1.32
FXN-203ENST00000396366 ATP2B4P23634 1241 aa23.31■■□□□ 1.32
FXN-203ENST00000396366 DEFB115Q30KQ5 88 aa23.31■■□□□ 1.32
FXN-203ENST00000396366 TBC1D10BQ4KMP7 808 aaPredicted RBP23.31■■□□□ 1.32
FXN-203ENST00000396366 DLK2Q6UY11 383 aa23.31■■□□□ 1.32
FXN-203ENST00000396366 VIL1P09327 827 aaKnown RBP23.3■■□□□ 1.32
FXN-203ENST00000396366 RBM26Q5T8P6 1007 aaKnown RBP23.3■■□□□ 1.32
FXN-203ENST00000396366 TRPM7Q96QT4 1865 aa23.3■■□□□ 1.32
FXN-203ENST00000396366 RASSF10A6NK89 507 aa23.29■■□□□ 1.32
FXN-203ENST00000396366 FOXO4P98177 505 aa23.29■■□□□ 1.32
FXN-203ENST00000396366 RPS12P25398 132 aaKnown RBP23.28■■□□□ 1.32
FXN-203ENST00000396366 IGHMBP2P38935 993 aaKnown RBP23.28■■□□□ 1.32
FXN-203ENST00000396366 CCT4P50991 539 aaKnown RBP23.28■■□□□ 1.32
FXN-203ENST00000396366 ZC3H15Q8WU90 426 aaKnown RBP23.28■■□□□ 1.32
FXN-203ENST00000396366 EPHA10Q5JZY3 1008 aa23.27■■□□□ 1.32
FXN-203ENST00000396366 SLC4A10Q6U841 1118 aa23.27■■□□□ 1.32
FXN-203ENST00000396366 TXNRD3Q86VQ6 643 aa23.27■■□□□ 1.32
FXN-203ENST00000396366 USP48Q86UV5 1035 aa23.26■■□□□ 1.31
FXN-203ENST00000396366 CDCA7LQ96GN5 454 aa23.26■■□□□ 1.31
FXN-203ENST00000396366 POLR2AP24928 1970 aaKnown RBP23.26■■□□□ 1.31
FXN-203ENST00000396366 CELF2O95319 508 aaKnown RBP23.25■■□□□ 1.31
FXN-203ENST00000396366 KLRK1P26718 216 aa23.25■■□□□ 1.31
FXN-203ENST00000396366 CDC37L1Q7L3B6 337 aa23.25■■□□□ 1.31
FXN-203ENST00000396366 MRPL50Q8N5N7 158 aaKnown RBP23.25■■□□□ 1.31
FXN-203ENST00000396366 MPHOSPH8Q99549 860 aa23.25■■□□□ 1.31
FXN-203ENST00000396366 ZNF408Q9H9D4 720 aa23.25■■□□□ 1.31
FXN-203ENST00000396366 WDR33Q9C0J8 1336 aaKnown RBP23.25■■□□□ 1.31
FXN-203ENST00000396366 GRM8O00222 908 aa23.24■■□□□ 1.31
FXN-203ENST00000396366 SLFN5Q08AF3 891 aa23.24■■□□□ 1.31
FXN-203ENST00000396366 RSBN1LQ6PCB5 846 aaPredicted RBP23.24■■□□□ 1.31
FXN-203ENST00000396366 MXD3Q9BW11 206 aa23.24■■□□□ 1.31
FXN-203ENST00000396366 ASTN2O75129 1339 aaPredicted RBP23.24■■□□□ 1.31
FXN-203ENST00000396366 MED23Q9ULK4 1368 aa23.24■■□□□ 1.31
FXN-203ENST00000396366 PSME4Q14997 1843 aa23.24■■□□□ 1.31
FXN-203ENST00000396366 ANKRD18BA2A2Z9 1011 aa23.23■■□□□ 1.31
FXN-203ENST00000396366 SNAP23O00161 211 aa23.23■■□□□ 1.31
FXN-203ENST00000396366 GRM1Q13255 1194 aa23.23■■□□□ 1.31
FXN-203ENST00000396366 CYP4F22Q6NT55 531 aa23.23■■□□□ 1.31
FXN-203ENST00000396366 LMBR1LQ6UX01 489 aa23.23■■□□□ 1.31
FXN-203ENST00000396366 PAXIP1Q6ZW49 1069 aaPredicted RBP23.23■■□□□ 1.31
FXN-203ENST00000396366 PODNQ7Z5L7 613 aa23.23■■□□□ 1.31
FXN-203ENST00000396366 CHMP3Q9Y3E7 222 aa23.23■■□□□ 1.31
FXN-203ENST00000396366 TLL2Q9Y6L7 1015 aa23.23■■□□□ 1.31
FXN-203ENST00000396366 USP17L3A6NCW0 530 aa23.22■■□□□ 1.31
FXN-203ENST00000396366 USP17L4A6NCW7 530 aa23.22■■□□□ 1.31
FXN-203ENST00000396366 E9PSI1 815 aa23.22■■□□□ 1.31
FXN-203ENST00000396366 FOXN1O15353 648 aa23.22■■□□□ 1.31
FXN-203ENST00000396366 CHRNDQ07001 517 aa23.22■■□□□ 1.31
FXN-203ENST00000396366 KIF4BQ2VIQ3 1234 aa23.22■■□□□ 1.31
FXN-203ENST00000396366 USP17L1Q7RTZ2 530 aa23.22■■□□□ 1.31
FXN-203ENST00000396366 HELBQ8NG08 1087 aaPredicted RBP23.22■■□□□ 1.31
FXN-203ENST00000396366 ZNF594Q96JF6 807 aaPredicted RBP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms