RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 CIAO1O76071 339 aa26.44■■□□□ 1.82
FXN-202ENST00000396364 SUPT20HQ8NEM7 779 aa26.44■■□□□ 1.82
FXN-202ENST00000396364 ANKIB1Q9P2G1 1089 aa26.44■■□□□ 1.82
FXN-202ENST00000396364 EYA2O00167 538 aa26.43■■□□□ 1.82
FXN-202ENST00000396364 G3BP1Q13283 466 aaKnown RBP eCLIP26.43■■□□□ 1.82
FXN-202ENST00000396364 HSP90AB4PQ58FF6 505 aa26.43■■□□□ 1.82
FXN-202ENST00000396364 DPP8Q6V1X1 898 aaPredicted RBP26.43■■□□□ 1.82
FXN-202ENST00000396364 MPNDQ8N594 471 aa26.43■■□□□ 1.82
FXN-202ENST00000396364 NSFL1CQ9UNZ2 370 aaKnown RBP26.43■■□□□ 1.82
FXN-202ENST00000396364 XDHP47989 1333 aa26.42■■□□□ 1.82
FXN-202ENST00000396364 OS9Q13438 667 aaPredicted RBP26.42■■□□□ 1.82
FXN-202ENST00000396364 MINPP1Q9UNW1 487 aa26.42■■□□□ 1.82
FXN-202ENST00000396364 YBX3P16989 372 aaKnown RBP eCLIP26.41■■□□□ 1.822e-8■■■□□ 17.5
FXN-202ENST00000396364 IL15P40933 162 aaPredicted RBP26.41■■□□□ 1.82
FXN-202ENST00000396364 ARHGAP27Q6ZUM4 889 aa26.41■■□□□ 1.82
FXN-202ENST00000396364 KLHDC4Q8TBB5 520 aa26.41■■□□□ 1.82
FXN-202ENST00000396364 SIL1Q9H173 461 aa26.41■■□□□ 1.82
FXN-202ENST00000396364 SURF6O75683 361 aaKnown RBP26.4■■□□□ 1.82
FXN-202ENST00000396364 CHRNDQ07001 517 aa26.4■■□□□ 1.82
FXN-202ENST00000396364 METTL24Q5JXM2 366 aa26.4■■□□□ 1.82
FXN-202ENST00000396364 TAOK3Q9H2K8 898 aa26.4■■□□□ 1.82
FXN-202ENST00000396364 PODXL2Q9NZ53 605 aa26.4■■□□□ 1.82
FXN-202ENST00000396364 COL4A1P02462 1669 aa26.4■■□□□ 1.82
FXN-202ENST00000396364 FER1L6Q2WGJ9 1857 aa26.39■■□□□ 1.82
FXN-202ENST00000396364 ATP2B4P23634 1241 aa26.39■■□□□ 1.82
FXN-202ENST00000396364 KCNJ4P48050 445 aa26.39■■□□□ 1.82
FXN-202ENST00000396364 FKBP4Q02790 459 aaKnown RBP eCLIP26.39■■□□□ 1.82
FXN-202ENST00000396364 ERC1Q8IUD2 1116 aa26.39■■□□□ 1.82
FXN-202ENST00000396364 PSMD1Q99460 953 aa26.39■■□□□ 1.82
FXN-202ENST00000396364 GGA1Q9UJY5 639 aa26.39■■□□□ 1.82
FXN-202ENST00000396364 PA2G4Q9UQ80 394 aaKnown RBP26.39■■□□□ 1.82
FXN-202ENST00000396364 RIPOR2Q9Y4F9 1068 aa26.39■■□□□ 1.82
FXN-202ENST00000396364 EYA3Q99504 573 aa26.38■■□□□ 1.81
FXN-202ENST00000396364 CEP126Q9P2H0 1117 aa26.38■■□□□ 1.81
FXN-202ENST00000396364 LEMD3Q9Y2U8 911 aa26.38■■□□□ 1.81
FXN-202ENST00000396364 LTBP3Q9NS15 1303 aa26.38■■□□□ 1.81
FXN-202ENST00000396364 GPSM2P81274 684 aa26.37■■□□□ 1.81
FXN-202ENST00000396364 LRRC24Q50LG9 513 aa26.37■■□□□ 1.81
FXN-202ENST00000396364 PUS3Q9BZE2 481 aaKnown RBP26.37■■□□□ 1.81
FXN-202ENST00000396364 VPS33BQ9H267 617 aa26.37■■□□□ 1.81
FXN-202ENST00000396364 NOP58Q9Y2X3 529 aaKnown RBP26.37■■□□□ 1.81
FXN-202ENST00000396364 PCDHB15Q9Y5E8 787 aa26.37■■□□□ 1.81
FXN-202ENST00000396364 C6orf229H3BNL8 230 aa26.36■■□□□ 1.81
FXN-202ENST00000396364 OLFM4Q6UX06 510 aa26.36■■□□□ 1.81
FXN-202ENST00000396364 RWDD1Q9H446 243 aaPredicted RBP26.36■■□□□ 1.81
FXN-202ENST00000396364 UFL1O94874 794 aa26.35■■□□□ 1.81
FXN-202ENST00000396364 SIRT2Q8IXJ6 389 aa26.35■■□□□ 1.81
FXN-202ENST00000396364 A0A1B0GUL6 1792 aa26.34■■□□□ 1.81
FXN-202ENST00000396364 PDE8BO95263 885 aa26.34■■□□□ 1.81
FXN-202ENST00000396364 RTFDC1Q9BY42 306 aaPredicted RBP26.34■■□□□ 1.81
FXN-202ENST00000396364 AKAP2Q9Y2D5 859 aa26.34■■□□□ 1.81
FXN-202ENST00000396364 SNED1Q8TER0 1413 aa26.33■■□□□ 1.81
FXN-202ENST00000396364 RAB11FIP3O75154 756 aa26.33■■□□□ 1.81
FXN-202ENST00000396364 HDAC1Q13547 482 aaPredicted RBP26.33■■□□□ 1.81
FXN-202ENST00000396364 ERICH6BQ5W0A0 696 aa26.33■■□□□ 1.81
FXN-202ENST00000396364 ATG9AQ7Z3C6 839 aa26.33■■□□□ 1.81
FXN-202ENST00000396364 TBC1D16Q8TBP0 767 aa26.33■■□□□ 1.81
FXN-202ENST00000396364 LTBP1Q14766 1721 aa26.33■■□□□ 1.81
FXN-202ENST00000396364 ZNF804BA4D1E1 1349 aa26.33■■□□□ 1.81
FXN-202ENST00000396364 UBE4AQ14139 1066 aa26.32■■□□□ 1.8
FXN-202ENST00000396364 PUM3Q15397 648 aaKnown RBP26.32■■□□□ 1.8
FXN-202ENST00000396364 ZC3H12CQ9C0D7 883 aaKnown RBP26.32■■□□□ 1.8
FXN-202ENST00000396364 NFKBIEO00221 500 aa26.31■■□□□ 1.8
FXN-202ENST00000396364 WASHC4Q2M389 1173 aa26.31■■□□□ 1.8
FXN-202ENST00000396364 HELBQ8NG08 1087 aaPredicted RBP26.31■■□□□ 1.8
FXN-202ENST00000396364 ZBTB47Q9UFB7 747 aaPredicted RBP26.31■■□□□ 1.8
FXN-202ENST00000396364 EXOC6BQ9Y2D4 811 aa26.31■■□□□ 1.8
FXN-202ENST00000396364 G3V3G9 751 aa26.3■■□□□ 1.8
FXN-202ENST00000396364 TAF5LO75529 589 aa26.3■■□□□ 1.8
FXN-202ENST00000396364 IFIT1P09914 478 aaKnown RBP26.3■■□□□ 1.8
FXN-202ENST00000396364 LMNB1P20700 586 aa26.3■■□□□ 1.8
FXN-202ENST00000396364 DCAF8Q5TAQ9 597 aa26.3■■□□□ 1.8
FXN-202ENST00000396364 GOLGB1Q14789 3259 aaKnown RBP26.3■■□□□ 1.8
FXN-202ENST00000396364 SLC5A1P13866 664 aa26.29■■□□□ 1.8
FXN-202ENST00000396364 IARSP41252 1262 aaKnown RBP26.29■■□□□ 1.8
FXN-202ENST00000396364 GCC1Q96CN9 775 aa26.29■■□□□ 1.8
FXN-202ENST00000396364 KIF1BPQ96EK5 621 aa26.29■■□□□ 1.8
FXN-202ENST00000396364 DCTPP1Q9H773 170 aa26.29■■□□□ 1.8
FXN-202ENST00000396364 POLLQ9UGP5 575 aa26.29■■□□□ 1.8
FXN-202ENST00000396364 MED23Q9ULK4 1368 aa26.29■■□□□ 1.8
FXN-202ENST00000396364 PPIP5K2O43314 1243 aa26.28■■□□□ 1.8
FXN-202ENST00000396364 RASSF7Q02833 373 aa26.28■■□□□ 1.8
FXN-202ENST00000396364 VGLL2Q8N8G2 317 aa26.28■■□□□ 1.8
FXN-202ENST00000396364 JDP2Q8WYK2 163 aa26.28■■□□□ 1.8
FXN-202ENST00000396364 LPIN2Q92539 896 aa26.28■■□□□ 1.8
FXN-202ENST00000396364 DUOX1Q9NRD9 1551 aa26.28■■□□□ 1.8
FXN-202ENST00000396364 KIAA2012Q0VF49 1180 aa26.27■■□□□ 1.8
FXN-202ENST00000396364 TFCP2Q12800 502 aa26.27■■□□□ 1.8
FXN-202ENST00000396364 ATP2B3Q16720 1220 aa26.27■■□□□ 1.8
FXN-202ENST00000396364 LARGE2Q8N3Y3 721 aa26.27■■□□□ 1.8
FXN-202ENST00000396364 ZNF277Q9NRM2 450 aaPredicted RBP26.27■■□□□ 1.8
FXN-202ENST00000396364 CAVIN4Q5BKX8 364 aa26.26■■□□□ 1.79
FXN-202ENST00000396364 GPR108Q9NPR9 543 aa26.26■■□□□ 1.79
FXN-202ENST00000396364 CCDC88AQ3V6T2 1871 aa26.25■■□□□ 1.79
FXN-202ENST00000396364 SASH1O94885 1247 aa26.25■■□□□ 1.79
FXN-202ENST00000396364 C15orf52Q6ZUT6 534 aaKnown RBP26.25■■□□□ 1.79
FXN-202ENST00000396364 SLC51AQ86UW1 340 aa26.25■■□□□ 1.79
FXN-202ENST00000396364 CLASRPQ8N2M8 674 aaKnown RBP26.25■■□□□ 1.79
FXN-202ENST00000396364 RHPN1Q8TCX5 695 aa26.25■■□□□ 1.79
FXN-202ENST00000396364 LRRCC1Q9C099 1032 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms