RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 PODXL2Q9NZ53 605 aa20.95■□□□□ 0.94
DDR1-229ENST00000396342 ZBTB12Q9Y330 459 aaPredicted RBP20.95■□□□□ 0.94
DDR1-229ENST00000396342 XDHP47989 1333 aa20.95■□□□□ 0.94
DDR1-229ENST00000396342 ANKRD36CQ5JPF3 1778 aa20.95■□□□□ 0.94
DDR1-229ENST00000396342 PI4KAP2A4QPH2 592 aa20.94■□□□□ 0.94
DDR1-229ENST00000396342 YDJCA8MPS7 323 aa20.94■□□□□ 0.94
DDR1-229ENST00000396342 LBX1P52954 281 aa20.94■□□□□ 0.94
DDR1-229ENST00000396342 RBM26Q5T8P6 1007 aaKnown RBP20.94■□□□□ 0.94
DDR1-229ENST00000396342 WWC1Q8IX03 1113 aa20.94■□□□□ 0.94
DDR1-229ENST00000396342 PI4KAP1Q8N8J0 262 aa20.94■□□□□ 0.94
DDR1-229ENST00000396342 TSR2Q969E8 191 aaKnown RBP20.94■□□□□ 0.94
DDR1-229ENST00000396342 MYH16Q9H6N6 1097 aa20.94■□□□□ 0.94
DDR1-229ENST00000396342 SEC31BQ9NQW1 1179 aa20.94■□□□□ 0.94
DDR1-229ENST00000396342 PGAP2Q9UHJ9 254 aa20.94■□□□□ 0.94
DDR1-229ENST00000396342 IL16Q14005 1332 aa20.94■□□□□ 0.94
DDR1-229ENST00000396342 CA12O43570 354 aa20.93■□□□□ 0.94
DDR1-229ENST00000396342 SLC4A2P04920 1241 aa20.93■□□□□ 0.94
DDR1-229ENST00000396342 ATP2B4P23634 1241 aa20.93■□□□□ 0.94
DDR1-229ENST00000396342 TBC1D10BQ4KMP7 808 aaPredicted RBP20.93■□□□□ 0.94
DDR1-229ENST00000396342 CYP4F22Q6NT55 531 aa20.93■□□□□ 0.94
DDR1-229ENST00000396342 KRT26Q7Z3Y9 468 aa20.93■□□□□ 0.94
DDR1-229ENST00000396342 SULF1Q8IWU6 871 aa20.93■□□□□ 0.94
DDR1-229ENST00000396342 C2orf69Q8N8R5 385 aa20.93■□□□□ 0.94
DDR1-229ENST00000396342 IGHMBP2P38935 993 aaKnown RBP20.92■□□□□ 0.94
DDR1-229ENST00000396342 CTSWP56202 376 aa20.92■□□□□ 0.94
DDR1-229ENST00000396342 NCBP3Q53F19 620 aaKnown RBP20.92■□□□□ 0.94
DDR1-229ENST00000396342 CST9Q5W186 159 aa20.92■□□□□ 0.94
DDR1-229ENST00000396342 USP48Q86UV5 1035 aa20.92■□□□□ 0.94
DDR1-229ENST00000396342 TRPM4Q8TD43 1214 aa20.92■□□□□ 0.94
DDR1-229ENST00000396342 HHIPL1Q96JK4 782 aa20.92■□□□□ 0.94
DDR1-229ENST00000396342 SAMD7Q7Z3H4 446 aa20.91■□□□□ 0.94
DDR1-229ENST00000396342 SAPCD2Q86UD0 394 aa20.91■□□□□ 0.94
DDR1-229ENST00000396342 ADAMTSL1Q8N6G6 1762 aa20.91■□□□□ 0.94
DDR1-229ENST00000396342 JARID2Q92833 1246 aaPredicted RBP20.91■□□□□ 0.94
DDR1-229ENST00000396342 FMR1Q06787 632 aaKnown RBP eCLIP20.9■□□□□ 0.94
DDR1-229ENST00000396342 FKBP5Q13451 457 aaPredicted RBP20.9■□□□□ 0.94
DDR1-229ENST00000396342 KIF4BQ2VIQ3 1234 aa20.9■□□□□ 0.94
DDR1-229ENST00000396342 TSPYL6Q8N831 410 aa20.9■□□□□ 0.94
DDR1-229ENST00000396342 HIRAP54198 1017 aaPredicted RBP20.89■□□□□ 0.93
DDR1-229ENST00000396342 PODNQ7Z5L7 613 aa20.89■□□□□ 0.93
DDR1-229ENST00000396342 OGFOD1Q8N543 542 aa20.89■□□□□ 0.93
DDR1-229ENST00000396342 AGBL3Q8NEM8 1001 aa20.89■□□□□ 0.93
DDR1-229ENST00000396342 MPHOSPH8Q99549 860 aa20.89■□□□□ 0.93
DDR1-229ENST00000396342 VIL1P09327 827 aaKnown RBP20.88■□□□□ 0.93
DDR1-229ENST00000396342 KCNJ4P48050 445 aa20.88■□□□□ 0.93
DDR1-229ENST00000396342 HUNKP57058 714 aa20.88■□□□□ 0.93
DDR1-229ENST00000396342 NOGQ13253 232 aa20.88■□□□□ 0.93
DDR1-229ENST00000396342 UBE3BQ7Z3V4 1068 aa20.88■□□□□ 0.93
DDR1-229ENST00000396342 BSDC1Q9NW68 430 aaPredicted RBP20.88■□□□□ 0.93
DDR1-229ENST00000396342 USP17L3A6NCW0 530 aa20.87■□□□□ 0.93
DDR1-229ENST00000396342 USP17L4A6NCW7 530 aa20.87■□□□□ 0.93
DDR1-229ENST00000396342 HSPA8P11142 646 aaKnown RBP20.87■□□□□ 0.93
DDR1-229ENST00000396342 RSBN1LQ6PCB5 846 aaPredicted RBP20.87■□□□□ 0.93
DDR1-229ENST00000396342 USP17L1Q7RTZ2 530 aa20.87■□□□□ 0.93
DDR1-229ENST00000396342 WDR63Q8IWG1 891 aa20.87■□□□□ 0.93
DDR1-229ENST00000396342 FBXW7Q969H0 707 aa20.87■□□□□ 0.93
DDR1-229ENST00000396342 ANKRD2Q9GZV1 360 aa20.87■□□□□ 0.93
DDR1-229ENST00000396342 SALL2Q9Y467 1007 aaPredicted RBP20.87■□□□□ 0.93
DDR1-229ENST00000396342 ZNF316A6NFI3 1004 aaPredicted RBP20.86■□□□□ 0.93
DDR1-229ENST00000396342 NEURL1BA8MQ27 555 aa20.86■□□□□ 0.93
DDR1-229ENST00000396342 FLIIQ13045 1269 aa20.86■□□□□ 0.93
DDR1-229ENST00000396342 CCDC102AQ96A19 550 aa20.86■□□□□ 0.93
DDR1-229ENST00000396342 GBA2Q9HCG7 927 aaPredicted RBP20.86■□□□□ 0.93
DDR1-229ENST00000396342 LTBP1Q14766 1721 aa20.85■□□□□ 0.93
DDR1-229ENST00000396342 USP17L8P0C7I0 530 aa20.85■□□□□ 0.93
DDR1-229ENST00000396342 BRPF1P55201 1214 aaPredicted RBP20.85■□□□□ 0.93
DDR1-229ENST00000396342 CWF19L2Q2TBE0 894 aaKnown RBP20.85■□□□□ 0.93
DDR1-229ENST00000396342 TTLL11Q8NHH1 800 aa20.85■□□□□ 0.93
DDR1-229ENST00000396342 DNAAF4Q8WXU2 420 aa20.85■□□□□ 0.93
DDR1-229ENST00000396342 SHTN1A0MZ66 631 aa20.84■□□□□ 0.93
DDR1-229ENST00000396342 IGKV5-2P06315 115 aa20.84■□□□□ 0.93
DDR1-229ENST00000396342 LINS1Q8NG48 757 aa20.84■□□□□ 0.93
DDR1-229ENST00000396342 KCNQ5Q9NR82 932 aa20.84■□□□□ 0.93
DDR1-229ENST00000396342 GGA3Q9NZ52 723 aa20.84■□□□□ 0.93
DDR1-229ENST00000396342 LEMD3Q9Y2U8 911 aa20.84■□□□□ 0.93
DDR1-229ENST00000396342 LAMB2P55268 1798 aa20.83■□□□□ 0.93
DDR1-229ENST00000396342 AOC2O75106 756 aa20.83■□□□□ 0.93
DDR1-229ENST00000396342 GREM2Q9H772 168 aa20.83■□□□□ 0.93
DDR1-229ENST00000396342 MINPP1Q9UNW1 487 aa20.83■□□□□ 0.93
DDR1-229ENST00000396342 MYO3BQ8WXR4 1341 aa20.82■□□□□ 0.92
DDR1-229ENST00000396342 H7C1W4 665 aa20.82■□□□□ 0.92
DDR1-229ENST00000396342 MMP14P50281 582 aa20.82■□□□□ 0.92
DDR1-229ENST00000396342 CCT4P50991 539 aaKnown RBP20.82■□□□□ 0.92
DDR1-229ENST00000396342 ZNF157P51786 506 aaPredicted RBP20.82■□□□□ 0.92
DDR1-229ENST00000396342 GCKRQ14397 625 aa20.82■□□□□ 0.92
DDR1-229ENST00000396342 RGMBQ6NW40 437 aa20.82■□□□□ 0.92
DDR1-229ENST00000396342 COA1Q9GZY4 146 aa20.82■□□□□ 0.92
DDR1-229ENST00000396342 CHMP3Q9Y3E7 222 aa20.82■□□□□ 0.92
DDR1-229ENST00000396342 RTL9Q8NET4 1388 aa20.82■□□□□ 0.92
DDR1-229ENST00000396342 FANCIQ9NVI1 1328 aa20.81■□□□□ 0.92
DDR1-229ENST00000396342 DUOX1Q9NRD9 1551 aa20.81■□□□□ 0.92
DDR1-229ENST00000396342 ANKRD18BA2A2Z9 1011 aa20.81■□□□□ 0.92
DDR1-229ENST00000396342 ITGA6P23229 1130 aa20.81■□□□□ 0.92
DDR1-229ENST00000396342 NF2P35240 595 aa20.81■□□□□ 0.92
DDR1-229ENST00000396342 SCARF1Q14162 830 aa20.81■□□□□ 0.92
DDR1-229ENST00000396342 CCDC184Q52MB2 194 aa20.81■□□□□ 0.92
DDR1-229ENST00000396342 TAF7LQ5H9L4 462 aa20.81■□□□□ 0.92
DDR1-229ENST00000396342 MYOZ2Q9NPC6 264 aa20.81■□□□□ 0.92
DDR1-229ENST00000396342 HDAC9Q9UKV0 1011 aa20.81■□□□□ 0.92
DDR1-229ENST00000396342 MED23Q9ULK4 1368 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms