RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 CYP46A1Q9Y6A2 500 aa14.56□□□□□ -0.08
ITGB1-202ENST00000396033 TAF5LO75529 589 aa14.56□□□□□ -0.08
ITGB1-202ENST00000396033 GOLGA6L22H0YM25 854 aa14.56□□□□□ -0.08
ITGB1-202ENST00000396033 BAG4O95429 457 aaKnown RBP14.56□□□□□ -0.08
ITGB1-202ENST00000396033 MCMDC2Q4G0Z9 681 aa14.56□□□□□ -0.08
ITGB1-202ENST00000396033 SUSD4Q5VX71 490 aa14.56□□□□□ -0.08
ITGB1-202ENST00000396033 CCDC129Q6ZRS4 1044 aa14.56□□□□□ -0.08
ITGB1-202ENST00000396033 PDRG1Q9NUG6 133 aa14.56□□□□□ -0.08
ITGB1-202ENST00000396033 SPATA31A6Q5VVP1 1343 aa14.56□□□□□ -0.08
ITGB1-202ENST00000396033 SH3TC1Q8TE82 1336 aa14.55□□□□□ -0.08
ITGB1-202ENST00000396033 PTMSP20962 102 aa14.55□□□□□ -0.08
ITGB1-202ENST00000396033 CLEC17AQ6ZS10 378 aa14.55□□□□□ -0.08
ITGB1-202ENST00000396033 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.55□□□□□ -0.08
ITGB1-202ENST00000396033 SEC62Q99442 399 aaKnown RBP14.55□□□□□ -0.08
ITGB1-202ENST00000396033 ZSWIM6Q9HCJ5 1215 aa14.55□□□□□ -0.08
ITGB1-202ENST00000396033 RIPOR2Q9Y4F9 1068 aa14.55□□□□□ -0.08
ITGB1-202ENST00000396033 ATP2B3Q16720 1220 aa14.55□□□□□ -0.08
ITGB1-202ENST00000396033 RUFY3Q7L099 469 aa14.55□□□□□ -0.08
ITGB1-202ENST00000396033 UTP14AQ9BVJ6 771 aaKnown RBP14.55□□□□□ -0.08
ITGB1-202ENST00000396033 LIMCH1Q9UPQ0 1083 aa14.55□□□□□ -0.08
ITGB1-202ENST00000396033 COL5A3P25940 1745 aaPredicted RBP14.55□□□□□ -0.08
ITGB1-202ENST00000396033 VPS53Q5VIR6 699 aa14.55□□□□□ -0.08
ITGB1-202ENST00000396033 PARP10Q53GL7 1025 aa14.54□□□□□ -0.08
ITGB1-202ENST00000396033 LARP6Q9BRS8 491 aaKnown RBP14.54□□□□□ -0.08
ITGB1-202ENST00000396033 SPEF2Q9C093 1822 aa14.54□□□□□ -0.08
ITGB1-202ENST00000396033 RPAP1Q9BWH6 1393 aaPredicted RBP14.54□□□□□ -0.08
ITGB1-202ENST00000396033 HCLS1P14317 486 aaPredicted RBP14.54□□□□□ -0.08
ITGB1-202ENST00000396033 PSMA5P28066 241 aa14.54□□□□□ -0.08
ITGB1-202ENST00000396033 AK7Q96M32 723 aa14.54□□□□□ -0.08
ITGB1-202ENST00000396033 HMG20BQ9P0W2 317 aa14.54□□□□□ -0.08
ITGB1-202ENST00000396033 FKBP4Q02790 459 aaKnown RBP eCLIP14.54□□□□□ -0.08
ITGB1-202ENST00000396033 PKNOX2Q96KN3 472 aa14.54□□□□□ -0.08
ITGB1-202ENST00000396033 GZF1Q9H116 711 aaPredicted RBP14.54□□□□□ -0.08
ITGB1-202ENST00000396033 NIP7Q9Y221 180 aaKnown RBP eCLIP14.54□□□□□ -0.08
ITGB1-202ENST00000396033 LINC00116Q8NCU8 138 aa14.53□□□□□ -0.08
ITGB1-202ENST00000396033 ZDHHC9Q9Y397 364 aa14.53□□□□□ -0.08
ITGB1-202ENST00000396033 HELLSQ9NRZ9 838 aa14.53□□□□□ -0.08
ITGB1-202ENST00000396033 ZNF652Q9Y2D9 606 aa14.53□□□□□ -0.08
ITGB1-202ENST00000396033 MEX3CQ5U5Q3 659 aaKnown RBP14.52□□□□□ -0.08
ITGB1-202ENST00000396033 TICAM2Q86XR7 235 aa14.52□□□□□ -0.08
ITGB1-202ENST00000396033 U3KPZ7 1027 aaPredicted RBP14.52□□□□□ -0.08
ITGB1-202ENST00000396033 ZNF831Q5JPB2 1677 aa14.52□□□□□ -0.08
ITGB1-202ENST00000396033 SLFNL1Q499Z3 407 aa14.52□□□□□ -0.09
ITGB1-202ENST00000396033 FOXD4L5Q5VV16 416 aaPredicted RBP14.52□□□□□ -0.09
ITGB1-202ENST00000396033 USPL1Q5W0Q7 1092 aa14.52□□□□□ -0.09
ITGB1-202ENST00000396033 FOXD4L4Q8WXT5 416 aaPredicted RBP14.52□□□□□ -0.09
ITGB1-202ENST00000396033 LRP5O75197 1615 aa14.52□□□□□ -0.09
ITGB1-202ENST00000396033 KCNQ4P56696 695 aa14.52□□□□□ -0.09
ITGB1-202ENST00000396033 ZMYM1Q5SVZ6 1142 aa14.52□□□□□ -0.09
ITGB1-202ENST00000396033 MCTP1Q6DN14 999 aa14.52□□□□□ -0.09
ITGB1-202ENST00000396033 BLOC1S2Q6QNY1 142 aa14.52□□□□□ -0.09
ITGB1-202ENST00000396033 TAF6LQ9Y6J9 622 aa14.52□□□□□ -0.09
ITGB1-202ENST00000396033 RNF113AO15541 343 aaKnown RBP14.51□□□□□ -0.09
ITGB1-202ENST00000396033 PTF1AQ7RTS3 328 aa14.51□□□□□ -0.09
ITGB1-202ENST00000396033 ABCC12Q96J65 1359 aa14.51□□□□□ -0.09
ITGB1-202ENST00000396033 THSD7AQ9UPZ6 1657 aa14.51□□□□□ -0.09
ITGB1-202ENST00000396033 BCORQ6W2J9 1755 aa14.51□□□□□ -0.09
ITGB1-202ENST00000396033 NTSR2O95665 410 aa14.51□□□□□ -0.09
ITGB1-202ENST00000396033 SKOR2Q2VWA4 1001 aaPredicted RBP14.51□□□□□ -0.09
ITGB1-202ENST00000396033 VGLL2Q8N8G2 317 aa14.51□□□□□ -0.09
ITGB1-202ENST00000396033 SCARF1Q14162 830 aa14.51□□□□□ -0.09
ITGB1-202ENST00000396033 LRRFIP1Q32MZ4 808 aaKnown RBP14.51□□□□□ -0.09
ITGB1-202ENST00000396033 LARGE1O95461 756 aa14.5□□□□□ -0.09
ITGB1-202ENST00000396033 KRT32Q14532 448 aa14.5□□□□□ -0.09
ITGB1-202ENST00000396033 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.5□□□□□ -0.09
ITGB1-202ENST00000396033 PDE8BO95263 885 aa14.5□□□□□ -0.09
ITGB1-202ENST00000396033 BRD1O95696 1058 aa14.5□□□□□ -0.09
ITGB1-202ENST00000396033 HSP90B1P14625 803 aaKnown RBP14.5□□□□□ -0.09
ITGB1-202ENST00000396033 TSGA10IPQ3SY00 556 aa14.5□□□□□ -0.09
ITGB1-202ENST00000396033 ZSCAN31Q96LW9 406 aaPredicted RBP14.5□□□□□ -0.09
ITGB1-202ENST00000396033 DDX60Q8IY21 1712 aaKnown RBP14.5□□□□□ -0.09
ITGB1-202ENST00000396033 ZAP70P43403 619 aa14.5□□□□□ -0.09
ITGB1-202ENST00000396033 CCDC152Q4G0S7 254 aa14.5□□□□□ -0.09
ITGB1-202ENST00000396033 SH2B1Q9NRF2 756 aaPredicted RBP14.5□□□□□ -0.09
ITGB1-202ENST00000396033 MAST3O60307 1309 aa14.5□□□□□ -0.09
ITGB1-202ENST00000396033 MROH5Q6ZUA9 1318 aa14.5□□□□□ -0.09
ITGB1-202ENST00000396033 RPS6KB1P23443 525 aa14.49□□□□□ -0.09
ITGB1-202ENST00000396033 PANK2Q9BZ23 570 aa14.49□□□□□ -0.09
ITGB1-202ENST00000396033 CNTNAP4Q9C0A0 1308 aa14.49□□□□□ -0.09
ITGB1-202ENST00000396033 CCDC83Q8IWF9 413 aa14.49□□□□□ -0.09
ITGB1-202ENST00000396033 MPHOSPH8Q99549 860 aa14.49□□□□□ -0.09
ITGB1-202ENST00000396033 BTAF1O14981 1849 aa14.49□□□□□ -0.09
ITGB1-202ENST00000396033 COL9A3Q14050 684 aaPredicted RBP14.49□□□□□ -0.09
ITGB1-202ENST00000396033 FAM182BQ5T319 152 aa14.49□□□□□ -0.09
ITGB1-202ENST00000396033 PI16Q6UXB8 463 aa14.49□□□□□ -0.09
ITGB1-202ENST00000396033 TCEANC2Q96MN5 208 aa14.49□□□□□ -0.09
ITGB1-202ENST00000396033 SEC31BQ9NQW1 1179 aa14.49□□□□□ -0.09
ITGB1-202ENST00000396033 LAMB2P55268 1798 aa14.48□□□□□ -0.09
ITGB1-202ENST00000396033 PUM3Q15397 648 aaKnown RBP14.48□□□□□ -0.09
ITGB1-202ENST00000396033 CLEC4GQ6UXB4 293 aa14.48□□□□□ -0.09
ITGB1-202ENST00000396033 DSCC1Q9BVC3 393 aa14.48□□□□□ -0.09
ITGB1-202ENST00000396033 SMC3Q9UQE7 1217 aa14.48□□□□□ -0.09
ITGB1-202ENST00000396033 NHSQ6T4R5 1651 aa14.48□□□□□ -0.09
ITGB1-202ENST00000396033 M0R2C6 588 aa14.48□□□□□ -0.09
ITGB1-202ENST00000396033 MCAMP43121 646 aa14.48□□□□□ -0.09
ITGB1-202ENST00000396033 HELBQ8NG08 1087 aaPredicted RBP14.48□□□□□ -0.09
ITGB1-202ENST00000396033 CERKQ8TCT0 537 aa14.48□□□□□ -0.09
ITGB1-202ENST00000396033 ZFYP08048 801 aaPredicted RBP14.48□□□□□ -0.09
ITGB1-202ENST00000396033 CYP21A2P08686 494 aa14.48□□□□□ -0.09
ITGB1-202ENST00000396033 ANKRD1Q15327 319 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms