RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 SKILP12757 684 aa10.2□□□□□ -0.78
BDNF-204ENST00000395980 CCZ1BP86790 482 aa10.2□□□□□ -0.78
BDNF-204ENST00000395980 CCZ1P86791 482 aaPredicted RBP10.2□□□□□ -0.78
BDNF-204ENST00000395980 STK3Q13188 491 aa10.2□□□□□ -0.78
BDNF-204ENST00000395980 CWF19L2Q2TBE0 894 aaKnown RBP10.2□□□□□ -0.78
BDNF-204ENST00000395980 NBPF6Q5VWK0 638 aa10.2□□□□□ -0.78
BDNF-204ENST00000395980 NBPF4Q96M43 638 aa10.2□□□□□ -0.78
BDNF-204ENST00000395980 OSBPL5Q9H0X9 879 aaPredicted RBP10.2□□□□□ -0.78
BDNF-204ENST00000395980 TLR7Q9NYK1 1049 aaKnown RBP10.2□□□□□ -0.78
BDNF-204ENST00000395980 FAM160A1Q05DH4 1040 aa10.19□□□□□ -0.78
BDNF-204ENST00000395980 CCAR1Q8IX12 1150 aaKnown RBP10.19□□□□□ -0.78
BDNF-204ENST00000395980 CEP57L1Q8IYX8 460 aa10.19□□□□□ -0.78
BDNF-204ENST00000395980 NAT10Q9H0A0 1025 aaKnown RBP10.19□□□□□ -0.78
BDNF-204ENST00000395980 DDX21Q9NR30 783 aaKnown RBP eCLIP10.19□□□□□ -0.78
BDNF-204ENST00000395980 CCDC69A6NI79 296 aa10.19□□□□□ -0.78
BDNF-204ENST00000395980 KINO60870 393 aaKnown RBP10.19□□□□□ -0.78
BDNF-204ENST00000395980 CCAR2Q8N163 923 aaKnown RBP10.19□□□□□ -0.78
BDNF-204ENST00000395980 ENGASEQ8NFI3 743 aa10.19□□□□□ -0.78
BDNF-204ENST00000395980 COL15A1P39059 1388 aa10.19□□□□□ -0.78
BDNF-204ENST00000395980 PROSER3Q2NL68 480 aa10.19□□□□□ -0.78
BDNF-204ENST00000395980 Q6ZUG5 572 aa10.19□□□□□ -0.78
BDNF-204ENST00000395980 CAMTA1Q9Y6Y1 1673 aa10.19□□□□□ -0.78
BDNF-204ENST00000395980 DHX40Q8IX18 779 aaKnown RBP10.18□□□□□ -0.78
BDNF-204ENST00000395980 COPRSQ9NQ92 184 aa10.18□□□□□ -0.78
BDNF-204ENST00000395980 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.18□□□□□ -0.78
BDNF-204ENST00000395980 HSP90B1P14625 803 aaKnown RBP10.18□□□□□ -0.78
BDNF-204ENST00000395980 SNW1Q13573 536 aaKnown RBP10.18□□□□□ -0.78
BDNF-204ENST00000395980 ZNF771Q7L3S4 317 aaPredicted RBP10.18□□□□□ -0.78
BDNF-204ENST00000395980 NSUN7Q8NE18 718 aaKnown RBP10.18□□□□□ -0.78
BDNF-204ENST00000395980 ZNF215Q9UL58 517 aaPredicted RBP10.18□□□□□ -0.78
BDNF-204ENST00000395980 ABCC6O95255 1503 aa10.18□□□□□ -0.78
BDNF-204ENST00000395980 SLU7O95391 586 aaKnown RBP10.18□□□□□ -0.78
BDNF-204ENST00000395980 SLFN14P0C7P3 912 aa10.18□□□□□ -0.78
BDNF-204ENST00000395980 KCNH5Q8NCM2 988 aa10.18□□□□□ -0.78
BDNF-204ENST00000395980 BPIFA3Q9BQP9 254 aa10.18□□□□□ -0.78
BDNF-204ENST00000395980 AGXT2Q9BYV1 514 aa10.18□□□□□ -0.78
BDNF-204ENST00000395980 ZNF609O15014 1411 aa10.18□□□□□ -0.78
BDNF-204ENST00000395980 SCRN1Q12765 414 aa10.17□□□□□ -0.78
BDNF-204ENST00000395980 C1orf141Q5JVX7 400 aa10.17□□□□□ -0.78
BDNF-204ENST00000395980 CYB5RLQ6IPT4 315 aa10.17□□□□□ -0.78
BDNF-204ENST00000395980 CCDC150Q8NCX0 1101 aa10.17□□□□□ -0.78
BDNF-204ENST00000395980 SH3TC1Q8TE82 1336 aa10.17□□□□□ -0.78
BDNF-204ENST00000395980 L2HGDHQ9H9P8 463 aa10.17□□□□□ -0.78
BDNF-204ENST00000395980 RGPD2P0DJD1 1756 aa10.17□□□□□ -0.78
BDNF-204ENST00000395980 PXDNQ92626 1479 aa10.17□□□□□ -0.78
BDNF-204ENST00000395980 SALL1Q9NSC2 1324 aa10.17□□□□□ -0.78
BDNF-204ENST00000395980 USP27XA6NNY8 438 aa10.17□□□□□ -0.78
BDNF-204ENST00000395980 KMT5BQ4FZB7 885 aa10.17□□□□□ -0.78
BDNF-204ENST00000395980 MCMDC2Q4G0Z9 681 aa10.17□□□□□ -0.78
BDNF-204ENST00000395980 ZNF592Q92610 1267 aa10.17□□□□□ -0.78
BDNF-204ENST00000395980 GOLPH3LQ9H4A5 285 aa10.17□□□□□ -0.78
BDNF-204ENST00000395980 LAMA4Q16363 1823 aa10.17□□□□□ -0.78
BDNF-204ENST00000395980 A0A1W2PQ27 194 aa10.17□□□□□ -0.78
BDNF-204ENST00000395980 A0A1W2PQ64 194 aa10.17□□□□□ -0.78
BDNF-204ENST00000395980 A0A1W2PQD8 194 aa10.17□□□□□ -0.78
BDNF-204ENST00000395980 PSDA5PKW4 1024 aaPredicted RBP10.17□□□□□ -0.78
BDNF-204ENST00000395980 CYP21A2P08686 494 aa10.17□□□□□ -0.78
BDNF-204ENST00000395980 NAA30Q147X3 362 aaPredicted RBP10.17□□□□□ -0.78
BDNF-204ENST00000395980 MPRIPQ6WCQ1 1025 aa10.17□□□□□ -0.78
BDNF-204ENST00000395980 DHX32Q7L7V1 743 aaKnown RBP10.17□□□□□ -0.78
BDNF-204ENST00000395980 NEXNQ0ZGT2 675 aa10.16□□□□□ -0.78
BDNF-204ENST00000395980 TERF2Q15554 542 aa10.16□□□□□ -0.78
BDNF-204ENST00000395980 USP16Q9Y5T5 823 aa10.16□□□□□ -0.78
BDNF-204ENST00000395980 IGKV5-2P06315 115 aa10.16□□□□□ -0.78
BDNF-204ENST00000395980 TNNI3KQ59H18 835 aa10.16□□□□□ -0.78
BDNF-204ENST00000395980 HAUS7Q99871 368 aa10.16□□□□□ -0.78
BDNF-204ENST00000395980 FPGT-TNNI3KV9GXZ4 949 aa10.16□□□□□ -0.78
BDNF-204ENST00000395980 PALLDQ8WX93 1383 aa10.16□□□□□ -0.78
BDNF-204ENST00000395980 PTPDC1A2A3K4 754 aa10.16□□□□□ -0.78
BDNF-204ENST00000395980 NEURL1BA8MQ27 555 aa10.16□□□□□ -0.78
BDNF-204ENST00000395980 NRDCO43847 1150 aa10.16□□□□□ -0.78
BDNF-204ENST00000395980 ARID5BQ14865 1188 aa10.16□□□□□ -0.78
BDNF-204ENST00000395980 FSIP1Q8NA03 581 aa10.16□□□□□ -0.78
BDNF-204ENST00000395980 DDX11Q96FC9 970 aa10.16□□□□□ -0.78
BDNF-204ENST00000395980 USP28Q96RU2 1077 aa10.16□□□□□ -0.78
BDNF-204ENST00000395980 DBNLQ9UJU6 430 aaKnown RBP10.16□□□□□ -0.78
BDNF-204ENST00000395980 ERBB3P21860 1342 aa10.15□□□□□ -0.78
BDNF-204ENST00000395980 CCDC66A2RUB6 948 aa10.15□□□□□ -0.78
BDNF-204ENST00000395980 MRPS27Q92552 414 aaKnown RBP10.15□□□□□ -0.78
BDNF-204ENST00000395980 DSCC1Q9BVC3 393 aa10.15□□□□□ -0.78
BDNF-204ENST00000395980 SIL1Q9H173 461 aa10.15□□□□□ -0.78
BDNF-204ENST00000395980 PHF8Q9UPP1 1060 aa10.15□□□□□ -0.78
BDNF-204ENST00000395980 SLIT3O75094 1523 aa10.15□□□□□ -0.78
BDNF-204ENST00000395980 GCKRQ14397 625 aa10.15□□□□□ -0.78
BDNF-204ENST00000395980 PDIA6Q15084 440 aa10.15□□□□□ -0.78
BDNF-204ENST00000395980 FBXO38Q6PIJ6 1188 aa10.15□□□□□ -0.78
BDNF-204ENST00000395980 FILIP1Q7Z7B0 1213 aa10.15□□□□□ -0.78
BDNF-204ENST00000395980 FBXL16Q8N461 479 aa10.15□□□□□ -0.78
BDNF-204ENST00000395980 RTEL1Q9NZ71 1219 aa10.15□□□□□ -0.78
BDNF-204ENST00000395980 CTDNEP1O95476 244 aa10.15□□□□□ -0.79
BDNF-204ENST00000395980 FGD1P98174 961 aa10.15□□□□□ -0.79
BDNF-204ENST00000395980 EXOSC10Q01780 885 aaKnown RBP10.15□□□□□ -0.79
BDNF-204ENST00000395980 ADALQ6DHV7 355 aa10.15□□□□□ -0.79
BDNF-204ENST00000395980 FMR1NBQ8N0W7 255 aaPredicted RBP10.15□□□□□ -0.79
BDNF-204ENST00000395980 AOPEPQ8N6M6 819 aa10.15□□□□□ -0.79
BDNF-204ENST00000395980 ZNF274Q96GC6 653 aaPredicted RBP10.15□□□□□ -0.79
BDNF-204ENST00000395980 CCP110O43303 1012 aa10.14□□□□□ -0.79
BDNF-204ENST00000395980 RFX5P48382 616 aaPredicted RBP10.14□□□□□ -0.79
BDNF-204ENST00000395980 RABL6Q3YEC7 729 aaPredicted RBP10.14□□□□□ -0.79
BDNF-204ENST00000395980 RIC3Q7Z5B4 369 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms