RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 ANGEL2Q5VTE6 544 aaKnown RBP18.27■□□□□ 0.52
VCPKMT-201ENST00000395859 DDX46Q7L014 1031 aaKnown RBP18.27■□□□□ 0.52
VCPKMT-201ENST00000395859 ERBB4Q15303 1308 aa18.26■□□□□ 0.51
VCPKMT-201ENST00000395859 PITPNM2Q9BZ72 1349 aa18.26■□□□□ 0.51
VCPKMT-201ENST00000395859 SCARF1Q14162 830 aa18.26■□□□□ 0.51
VCPKMT-201ENST00000395859 PDIA6Q15084 440 aa18.26■□□□□ 0.51
VCPKMT-201ENST00000395859 UBE2Q2LH0YL09 131 aa18.25■□□□□ 0.51
VCPKMT-201ENST00000395859 DLL1O00548 723 aa18.25■□□□□ 0.51
VCPKMT-201ENST00000395859 OTOP1Q7RTM1 612 aa18.25■□□□□ 0.51
VCPKMT-201ENST00000395859 ARMC5Q96C12 935 aa18.25■□□□□ 0.51
VCPKMT-201ENST00000395859 OTUD5Q96G74 571 aa18.25■□□□□ 0.51
VCPKMT-201ENST00000395859 PSME4Q14997 1843 aa18.24■□□□□ 0.51
VCPKMT-201ENST00000395859 EN2P19622 333 aaPredicted RBP18.24■□□□□ 0.51
VCPKMT-201ENST00000395859 NLRP10Q86W26 655 aa18.24■□□□□ 0.51
VCPKMT-201ENST00000395859 GMLQ99445 158 aa18.24■□□□□ 0.51
VCPKMT-201ENST00000395859 RIMBP2O15034 1052 aa18.23■□□□□ 0.51
VCPKMT-201ENST00000395859 DOK7Q18PE1 504 aa18.23■□□□□ 0.51
VCPKMT-201ENST00000395859 NECTIN2Q92692 538 aa18.23■□□□□ 0.51
VCPKMT-201ENST00000395859 GPSM2P81274 684 aa18.22■□□□□ 0.51
VCPKMT-201ENST00000395859 SREBF2Q12772 1141 aa18.22■□□□□ 0.51
VCPKMT-201ENST00000395859 CELF1Q92879 486 aaKnown RBP18.22■□□□□ 0.51
VCPKMT-201ENST00000395859 NSFL1CQ9UNZ2 370 aaKnown RBP18.22■□□□□ 0.51
VCPKMT-201ENST00000395859 TRIM17Q9Y577 477 aa18.22■□□□□ 0.51
VCPKMT-201ENST00000395859 LAMB1P07942 1786 aa18.22■□□□□ 0.51
VCPKMT-201ENST00000395859 AGBL3Q8NEM8 1001 aa18.21■□□□□ 0.51
VCPKMT-201ENST00000395859 TBC1D16Q8TBP0 767 aa18.21■□□□□ 0.51
VCPKMT-201ENST00000395859 PTPN22Q9Y2R2 807 aa18.21■□□□□ 0.51
VCPKMT-201ENST00000395859 PNISRQ8TF01 805 aaKnown RBP18.2■□□□□ 0.5
VCPKMT-201ENST00000395859 THUMPD2Q9BTF0 503 aaKnown RBP18.2■□□□□ 0.5
VCPKMT-201ENST00000395859 SF3B3Q15393 1217 aaKnown RBP18.19■□□□□ 0.5
VCPKMT-201ENST00000395859 PROSER3Q2NL68 480 aa18.19■□□□□ 0.5
VCPKMT-201ENST00000395859 RSBN1LQ6PCB5 846 aaPredicted RBP18.19■□□□□ 0.5
VCPKMT-201ENST00000395859 SCAF8Q9UPN6 1271 aaKnown RBP18.19■□□□□ 0.5
VCPKMT-201ENST00000395859 SH3TC1Q8TE82 1336 aa18.19■□□□□ 0.5
VCPKMT-201ENST00000395859 C6orf229H3BNL8 230 aa18.18■□□□□ 0.5
VCPKMT-201ENST00000395859 CAP1Q01518 475 aa18.18■□□□□ 0.5
VCPKMT-201ENST00000395859 MKRN3Q13064 507 aaKnown RBP18.18■□□□□ 0.5
VCPKMT-201ENST00000395859 PRAMEF18Q5VWM3 479 aa18.18■□□□□ 0.5
VCPKMT-201ENST00000395859 EYA3Q99504 573 aa18.18■□□□□ 0.5
VCPKMT-201ENST00000395859 MYOZ2Q9NPC6 264 aa18.18■□□□□ 0.5
VCPKMT-201ENST00000395859 PODXL2Q9NZ53 605 aa18.18■□□□□ 0.5
VCPKMT-201ENST00000395859 DLG5Q8TDM6 1919 aa18.17■□□□□ 0.5
VCPKMT-201ENST00000395859 ALDH1A1P00352 501 aa18.17■□□□□ 0.5
VCPKMT-201ENST00000395859 PTPN12Q05209 780 aaKnown RBP18.17■□□□□ 0.5
VCPKMT-201ENST00000395859 LDLRAD1Q5T700 205 aa18.17■□□□□ 0.5
VCPKMT-201ENST00000395859 SPRYD7Q5W111 196 aa18.17■□□□□ 0.5
VCPKMT-201ENST00000395859 TRMT112Q9UI30 125 aaKnown RBP18.17■□□□□ 0.5
VCPKMT-201ENST00000395859 UNC80Q8N2C7 3258 aa18.16■□□□□ 0.5
VCPKMT-201ENST00000395859 H0YGN5 161 aa18.16■□□□□ 0.5
VCPKMT-201ENST00000395859 TCIRG1Q13488 830 aa18.16■□□□□ 0.5
VCPKMT-201ENST00000395859 HSP90AB3PQ58FF7 597 aa18.16■□□□□ 0.5
VCPKMT-201ENST00000395859 ZNF333Q96JL9 665 aa18.16■□□□□ 0.5
VCPKMT-201ENST00000395859 ZNF646O15015 1829 aaPredicted RBP18.16■□□□□ 0.5
VCPKMT-201ENST00000395859 USP17L8P0C7I0 530 aa18.15■□□□□ 0.5
VCPKMT-201ENST00000395859 IFNL1Q8IU54 200 aa18.15■□□□□ 0.5
VCPKMT-201ENST00000395859 U2AF1L5P0DN76 240 aaPredicted RBP18.14■□□□□ 0.49
VCPKMT-201ENST00000395859 U2AF1Q01081 240 aaKnown RBP eCLIP18.14■□□□□ 0.49
VCPKMT-201ENST00000395859 NBPF9Q3BBW0 867 aa18.14■□□□□ 0.49
VCPKMT-201ENST00000395859 SLC17A8Q8NDX2 589 aa18.14■□□□□ 0.49
VCPKMT-201ENST00000395859 PRO3102Q9H379 93 aa18.14■□□□□ 0.49
VCPKMT-201ENST00000395859 IGF2BP3O00425 579 aaKnown RBP eCLIP18.13■□□□□ 0.49
VCPKMT-201ENST00000395859 ANXA1P04083 346 aa18.13■□□□□ 0.49
VCPKMT-201ENST00000395859 ZC3H12CQ9C0D7 883 aaKnown RBP18.13■□□□□ 0.49
VCPKMT-201ENST00000395859 INHBEP58166 350 aa18.12■□□□□ 0.49
VCPKMT-201ENST00000395859 NUDCQ9Y266 331 aa18.12■□□□□ 0.49
VCPKMT-201ENST00000395859 MANSC4A6NHS7 340 aaPredicted RBP18.11■□□□□ 0.49
VCPKMT-201ENST00000395859 COPS6Q7L5N1 327 aa18.11■□□□□ 0.49
VCPKMT-201ENST00000395859 CD99L2Q8TCZ2 262 aa18.11■□□□□ 0.49
VCPKMT-201ENST00000395859 ERO1AQ96HE7 468 aa18.11■□□□□ 0.49
VCPKMT-201ENST00000395859 CFAP53Q96M91 514 aa18.11■□□□□ 0.49
VCPKMT-201ENST00000395859 RBM27Q9P2N5 1060 aaKnown RBP18.11■□□□□ 0.49
VCPKMT-201ENST00000395859 WNT10BO00744 389 aa18.1■□□□□ 0.49
VCPKMT-201ENST00000395859 RPS8P62241 208 aaKnown RBP18.1■□□□□ 0.49
VCPKMT-201ENST00000395859 TTLL12Q14166 644 aaPredicted RBP18.1■□□□□ 0.49
VCPKMT-201ENST00000395859 CHRDL2Q6WN34 429 aa18.1■□□□□ 0.49
VCPKMT-201ENST00000395859 CLSPNQ9HAW4 1339 aa18.09■□□□□ 0.49
VCPKMT-201ENST00000395859 MAP3K11Q16584 847 aa18.09■□□□□ 0.49
VCPKMT-201ENST00000395859 XAGE3Q8WTP9 111 aa18.09■□□□□ 0.49
VCPKMT-201ENST00000395859 ISCA1Q9BUE6 129 aa18.09■□□□□ 0.49
VCPKMT-201ENST00000395859 EFCC1Q9HA90 598 aa18.09■□□□□ 0.49
VCPKMT-201ENST00000395859 UFL1O94874 794 aa18.08■□□□□ 0.48
VCPKMT-201ENST00000395859 ZBTB48P10074 688 aaPredicted RBP18.08■□□□□ 0.48
VCPKMT-201ENST00000395859 ARMC9Q7Z3E5 817 aa18.08■□□□□ 0.48
VCPKMT-201ENST00000395859 FAM89AQ96GI7 184 aa18.08■□□□□ 0.48
VCPKMT-201ENST00000395859 TMEM106CQ9BVX2 250 aa18.08■□□□□ 0.48
VCPKMT-201ENST00000395859 USP17L3A6NCW0 530 aa18.07■□□□□ 0.48
VCPKMT-201ENST00000395859 USP17L4A6NCW7 530 aa18.07■□□□□ 0.48
VCPKMT-201ENST00000395859 NF2P35240 595 aa18.07■□□□□ 0.48
VCPKMT-201ENST00000395859 CRHR2Q13324 411 aa18.07■□□□□ 0.48
VCPKMT-201ENST00000395859 USP17L1Q7RTZ2 530 aa18.07■□□□□ 0.48
VCPKMT-201ENST00000395859 PODNQ7Z5L7 613 aa18.07■□□□□ 0.48
VCPKMT-201ENST00000395859 ZBED3Q96IU2 234 aaPredicted RBP18.07■□□□□ 0.48
VCPKMT-201ENST00000395859 VCANP13611 3396 aa18.06■□□□□ 0.48
VCPKMT-201ENST00000395859 SSC5DA1L4H1 1573 aa18.06■□□□□ 0.48
VCPKMT-201ENST00000395859 EIF2S2P20042 333 aaKnown RBP18.06■□□□□ 0.48
VCPKMT-201ENST00000395859 ZNF428Q96B54 188 aa18.06■□□□□ 0.48
VCPKMT-201ENST00000395859 WNK4Q96J92 1243 aa18.06■□□□□ 0.48
VCPKMT-201ENST00000395859 PLEKHF1Q96S99 279 aa18.06■□□□□ 0.48
VCPKMT-201ENST00000395859 GGA1Q9UJY5 639 aa18.06■□□□□ 0.48
VCPKMT-201ENST00000395859 MNX1P50219 401 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms