RNA–Protein interactions for RNA: ENST00000395522.6

SPECC1-202, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene SPECC1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-202ENST00000395522 NLRP2Q9NX02 1062 aa17.15■□□□□ 0.34
SPECC1-202ENST00000395522 NALCNQ8IZF0 1738 aa17.15■□□□□ 0.34
SPECC1-202ENST00000395522 MTX1Q13505 466 aa17.15■□□□□ 0.34
SPECC1-202ENST00000395522 ANKRD1Q15327 319 aa17.15■□□□□ 0.34
SPECC1-202ENST00000395522 DDX17Q92841 729 aaKnown RBP17.15■□□□□ 0.34
SPECC1-202ENST00000395522 PXDNLA1KZ92 1463 aa17.14■□□□□ 0.34
SPECC1-202ENST00000395522 PTPDC1A2A3K4 754 aa17.14■□□□□ 0.33
SPECC1-202ENST00000395522 EPB41L2O43491 1005 aaKnown RBP17.14■□□□□ 0.33
SPECC1-202ENST00000395522 ALDH1L1O75891 902 aa17.14■□□□□ 0.33
SPECC1-202ENST00000395522 DDX58O95786 925 aaKnown RBP17.14■□□□□ 0.33
SPECC1-202ENST00000395522 CEP135Q66GS9 1140 aa17.14■□□□□ 0.33
SPECC1-202ENST00000395522 PLA2G4DQ86XP0 818 aa17.14■□□□□ 0.33
SPECC1-202ENST00000395522 FSIP1Q8NA03 581 aa17.14■□□□□ 0.33
SPECC1-202ENST00000395522 ZNF594Q96JF6 807 aaPredicted RBP17.14■□□□□ 0.33
SPECC1-202ENST00000395522 DIP2AQ14689 1571 aa17.14■□□□□ 0.33
SPECC1-202ENST00000395522 NEURL1BA8MQ27 555 aa17.14■□□□□ 0.33
SPECC1-202ENST00000395522 SDF4Q9BRK5 362 aa17.14■□□□□ 0.33
SPECC1-202ENST00000395522 ST7Q9NRC1 585 aa17.14■□□□□ 0.33
SPECC1-202ENST00000395522 ZNF215Q9UL58 517 aaPredicted RBP17.14■□□□□ 0.33
SPECC1-202ENST00000395522 CCDC69A6NI79 296 aa17.13■□□□□ 0.33
SPECC1-202ENST00000395522 TNNI3KQ59H18 835 aa17.13■□□□□ 0.33
SPECC1-202ENST00000395522 TMX1Q9H3N1 280 aa17.13■□□□□ 0.33
SPECC1-202ENST00000395522 FPGT-TNNI3KV9GXZ4 949 aa17.13■□□□□ 0.33
SPECC1-202ENST00000395522 A0A087WZG4 1122 aa17.13■□□□□ 0.33
SPECC1-202ENST00000395522 HIP1O00291 1037 aa17.13■□□□□ 0.33
SPECC1-202ENST00000395522 KINO60870 393 aaKnown RBP17.13■□□□□ 0.33
SPECC1-202ENST00000395522 SMC2O95347 1197 aa17.13■□□□□ 0.33
SPECC1-202ENST00000395522 GCP02774 474 aa17.13■□□□□ 0.33
SPECC1-202ENST00000395522 GCKRQ14397 625 aa17.13■□□□□ 0.33
SPECC1-202ENST00000395522 CCDC73Q6ZRK6 1079 aa17.13■□□□□ 0.33
SPECC1-202ENST00000395522 ZNF496Q96IT1 587 aaPredicted RBP17.13■□□□□ 0.33
SPECC1-202ENST00000395522 PDIA6Q15084 440 aa17.12■□□□□ 0.33
SPECC1-202ENST00000395522 ZNF609O15014 1411 aa17.12■□□□□ 0.33
SPECC1-202ENST00000395522 GOLGA8FQ08AF8 430 aa17.12■□□□□ 0.33
SPECC1-202ENST00000395522 GOLGA8DPQ0D2H9 430 aa17.12■□□□□ 0.33
SPECC1-202ENST00000395522 LRRC8AQ8IWT6 810 aa17.12■□□□□ 0.33
SPECC1-202ENST00000395522 TBX22Q9Y458 520 aa17.12■□□□□ 0.33
SPECC1-202ENST00000395522 ELP1O95163 1332 aa17.11■□□□□ 0.33
SPECC1-202ENST00000395522 ELF2Q15723 593 aa17.11■□□□□ 0.33
SPECC1-202ENST00000395522 LMBR1LQ6UX01 489 aa17.11■□□□□ 0.33
SPECC1-202ENST00000395522 TDRD7Q8NHU6 1098 aaKnown RBP17.11■□□□□ 0.33
SPECC1-202ENST00000395522 KCNB2Q92953 911 aa17.11■□□□□ 0.33
SPECC1-202ENST00000395522 DDX21Q9NR30 783 aaKnown RBP eCLIP17.11■□□□□ 0.33
SPECC1-202ENST00000395522 TOPAZ1Q8N9V7 1692 aa17.11■□□□□ 0.33
SPECC1-202ENST00000395522 CTDNEP1O95476 244 aa17.11■□□□□ 0.33
SPECC1-202ENST00000395522 TPM3P06753 285 aa17.11■□□□□ 0.33
SPECC1-202ENST00000395522 FKBP4Q02790 459 aaKnown RBP eCLIP17.11■□□□□ 0.33
SPECC1-202ENST00000395522 ANKRD7Q92527 254 aa17.11■□□□□ 0.33
SPECC1-202ENST00000395522 MED23Q9ULK4 1368 aa17.11■□□□□ 0.33
SPECC1-202ENST00000395522 RXRAP19793 462 aa17.1■□□□□ 0.33
SPECC1-202ENST00000395522 PTPN12Q05209 780 aaKnown RBP17.1■□□□□ 0.33
SPECC1-202ENST00000395522 SF3A1Q15459 793 aaKnown RBP17.1■□□□□ 0.33
SPECC1-202ENST00000395522 FAM177A1Q8N128 213 aaPredicted RBP17.1■□□□□ 0.33
SPECC1-202ENST00000395522 AGLP35573 1532 aa17.1■□□□□ 0.33
SPECC1-202ENST00000395522 ERICH4A6NGS2 130 aa17.1■□□□□ 0.33
SPECC1-202ENST00000395522 PTPN14Q15678 1187 aa17.1■□□□□ 0.33
SPECC1-202ENST00000395522 LRRN4CLQ8ND94 238 aa17.1■□□□□ 0.33
SPECC1-202ENST00000395522 NSUN7Q8NE18 718 aaKnown RBP17.1■□□□□ 0.33
SPECC1-202ENST00000395522 CABLES1Q8TDN4 633 aa17.1■□□□□ 0.33
SPECC1-202ENST00000395522 BABAM1Q9NWV8 329 aa17.1■□□□□ 0.33
SPECC1-202ENST00000395522 UBR1Q8IWV7 1749 aa17.1■□□□□ 0.33
SPECC1-202ENST00000395522 CSB-PGBD3P0DP91 1061 aa17.1■□□□□ 0.33
SPECC1-202ENST00000395522 IQCB1Q15051 598 aa17.1■□□□□ 0.33
SPECC1-202ENST00000395522 ZNF790Q6PG37 636 aa17.1■□□□□ 0.33
SPECC1-202ENST00000395522 SMTNL1A8MU46 457 aa17.09■□□□□ 0.33
SPECC1-202ENST00000395522 ANKRD13DQ6ZTN6 518 aa17.09■□□□□ 0.33
SPECC1-202ENST00000395522 RGPD2P0DJD1 1756 aa17.09■□□□□ 0.33
SPECC1-202ENST00000395522 CTIFO43310 598 aaKnown RBP17.09■□□□□ 0.33
SPECC1-202ENST00000395522 CFAP45Q9UL16 551 aa17.09■□□□□ 0.33
SPECC1-202ENST00000395522 HOXB7P09629 217 aa17.08■□□□□ 0.33
SPECC1-202ENST00000395522 ZRSR1Q15695 479 aaKnown RBP17.08■□□□□ 0.33
SPECC1-202ENST00000395522 CHRNA2Q15822 529 aa17.08■□□□□ 0.33
SPECC1-202ENST00000395522 DPCR1Q3MIW9 517 aa17.08■□□□□ 0.33
SPECC1-202ENST00000395522 MCMDC2Q4G0Z9 681 aa17.08■□□□□ 0.33
SPECC1-202ENST00000395522 LRRC37A3O60309 1634 aa17.08■□□□□ 0.32
SPECC1-202ENST00000395522 MARCKSP29966 332 aaPredicted RBP17.08■□□□□ 0.32
SPECC1-202ENST00000395522 MAPK8IP2Q13387 824 aaPredicted RBP17.08■□□□□ 0.32
SPECC1-202ENST00000395522 STX1AQ16623 288 aa17.07■□□□□ 0.32
SPECC1-202ENST00000395522 TMC6Q7Z403 805 aa17.07■□□□□ 0.32
SPECC1-202ENST00000395522 CGNQ9P2M7 1197 aaKnown RBP17.07■□□□□ 0.32
SPECC1-202ENST00000395522 LMOD1P29536 600 aaPredicted RBP17.07■□□□□ 0.32
SPECC1-202ENST00000395522 WASHC4Q2M389 1173 aa17.07■□□□□ 0.32
SPECC1-202ENST00000395522 THEMISQ8N1K5 641 aaPredicted RBP17.07■□□□□ 0.32
SPECC1-202ENST00000395522 CLIC4Q9Y696 253 aa17.07■□□□□ 0.32
SPECC1-202ENST00000395522 ADD1P35611 737 aaKnown RBP17.07■□□□□ 0.32
SPECC1-202ENST00000395522 NDUFA8P51970 172 aa17.07■□□□□ 0.32
SPECC1-202ENST00000395522 SNW1Q13573 536 aaKnown RBP17.07■□□□□ 0.32
SPECC1-202ENST00000395522 LRRC24Q50LG9 513 aa17.07■□□□□ 0.32
SPECC1-202ENST00000395522 DHX40Q8IX18 779 aaKnown RBP17.07■□□□□ 0.32
SPECC1-202ENST00000395522 ZBTB3Q9H5J0 574 aa17.07■□□□□ 0.32
SPECC1-202ENST00000395522 HMG20BQ9P0W2 317 aa17.07■□□□□ 0.32
SPECC1-202ENST00000395522 CACNA1FO60840 1977 aa17.07■□□□□ 0.32
SPECC1-202ENST00000395522 ZBTB22O15209 634 aa17.06■□□□□ 0.32
SPECC1-202ENST00000395522 PI16Q6UXB8 463 aa17.06■□□□□ 0.32
SPECC1-202ENST00000395522 IFNKQ9P0W0 207 aa17.06■□□□□ 0.32
SPECC1-202ENST00000395522 CTNNA3Q9UI47 895 aa17.06■□□□□ 0.32
SPECC1-202ENST00000395522 DENND2AQ9ULE3 1009 aa17.06■□□□□ 0.32
SPECC1-202ENST00000395522 KMT5BQ4FZB7 885 aa17.06■□□□□ 0.32
SPECC1-202ENST00000395522 AIFM3Q96NN9 605 aa17.06■□□□□ 0.32
SPECC1-202ENST00000395522 PCDHA7Q9UN72 937 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms