RNA–Protein interactions for RNA: ENST00000395466.6

SNCAIP-204, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 1,888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-204ENST00000395466 DTNBO60941 627 aa16.56■□□□□ 0.24
SNCAIP-204ENST00000395466 KRT32Q14532 448 aa16.56■□□□□ 0.24
SNCAIP-204ENST00000395466 ANKRD1Q15327 319 aa16.56■□□□□ 0.24
SNCAIP-204ENST00000395466 HLFQ16534 295 aa16.56■□□□□ 0.24
SNCAIP-204ENST00000395466 ZMYM1Q5SVZ6 1142 aa16.56■□□□□ 0.24
SNCAIP-204ENST00000395466 FAM89AQ96GI7 184 aa16.56■□□□□ 0.24
SNCAIP-204ENST00000395466 RBSNQ9H1K0 784 aa16.56■□□□□ 0.24
SNCAIP-204ENST00000395466 CDHR2Q9BYE9 1310 aa16.55■□□□□ 0.24
SNCAIP-204ENST00000395466 CCDC57Q2TAC2 916 aa16.55■□□□□ 0.24
SNCAIP-204ENST00000395466 SLFNL1Q499Z3 407 aa16.55■□□□□ 0.24
SNCAIP-204ENST00000395466 LRSAM1Q6UWE0 723 aa16.55■□□□□ 0.24
SNCAIP-204ENST00000395466 HELLSQ9NRZ9 838 aa16.55■□□□□ 0.24
SNCAIP-204ENST00000395466 CNPY2Q9Y2B0 182 aa16.55■□□□□ 0.24
SNCAIP-204ENST00000395466 NRAPQ86VF7 1730 aa16.55■□□□□ 0.24
SNCAIP-204ENST00000395466 MYH7P12883 1935 aa16.55■□□□□ 0.24
SNCAIP-204ENST00000395466 CYP21A2P08686 494 aa16.54■□□□□ 0.24
SNCAIP-204ENST00000395466 IFIT1P09914 478 aaKnown RBP16.54■□□□□ 0.24
SNCAIP-204ENST00000395466 NLRP10Q86W26 655 aa16.54■□□□□ 0.24
SNCAIP-204ENST00000395466 PPP1R9BQ96SB3 815 aa16.54■□□□□ 0.24
SNCAIP-204ENST00000395466 CEP126Q9P2H0 1117 aa16.54■□□□□ 0.24
SNCAIP-204ENST00000395466 SYCE3A1L190 88 aa16.54■□□□□ 0.24
SNCAIP-204ENST00000395466 SYNE4Q8N205 404 aa16.54■□□□□ 0.24
SNCAIP-204ENST00000395466 NEK1Q96PY6 1258 aa16.54■□□□□ 0.24
SNCAIP-204ENST00000395466 RIC1Q4ADV7 1423 aa16.54■□□□□ 0.24
SNCAIP-204ENST00000395466 AKAP11Q9UKA4 1901 aa16.53■□□□□ 0.24
SNCAIP-204ENST00000395466 ZBTB1Q9Y2K1 713 aa16.53■□□□□ 0.24
SNCAIP-204ENST00000395466 EXOC5O00471 708 aa16.52■□□□□ 0.24
SNCAIP-204ENST00000395466 ADORA1P30542 326 aa16.52■□□□□ 0.24
SNCAIP-204ENST00000395466 STOX1Q6ZVD7 989 aa16.52■□□□□ 0.24
SNCAIP-204ENST00000395466 DSCC1Q9BVC3 393 aa16.52■□□□□ 0.24
SNCAIP-204ENST00000395466 CCDC173Q0VFZ6 552 aa16.52■□□□□ 0.23
SNCAIP-204ENST00000395466 HSP90AB3PQ58FF7 597 aa16.52■□□□□ 0.23
SNCAIP-204ENST00000395466 XAGE2Q96GT9 111 aa16.52■□□□□ 0.23
SNCAIP-204ENST00000395466 CCDC85AQ96PX6 553 aaPredicted RBP16.52■□□□□ 0.23
SNCAIP-204ENST00000395466 ATP6V1DQ9Y5K8 247 aa16.52■□□□□ 0.23
SNCAIP-204ENST00000395466 RNF113AO15541 343 aaKnown RBP16.51■□□□□ 0.23
SNCAIP-204ENST00000395466 GPTP24298 496 aa16.51■□□□□ 0.23
SNCAIP-204ENST00000395466 IFIT5Q13325 482 aaKnown RBP16.51■□□□□ 0.23
SNCAIP-204ENST00000395466 TTLL11Q8NHH1 800 aa16.51■□□□□ 0.23
SNCAIP-204ENST00000395466 AKAP2Q9Y2D5 859 aa16.51■□□□□ 0.23
SNCAIP-204ENST00000395466 RIPOR2Q9Y4F9 1068 aa16.51■□□□□ 0.23
SNCAIP-204ENST00000395466 MAST3O60307 1309 aa16.51■□□□□ 0.23
SNCAIP-204ENST00000395466 NWD2Q9ULI1 1742 aa16.51■□□□□ 0.23
SNCAIP-204ENST00000395466 SLIT2O94813 1529 aa16.5■□□□□ 0.23
SNCAIP-204ENST00000395466 PDIA4P13667 645 aaKnown RBP16.5■□□□□ 0.23
SNCAIP-204ENST00000395466 SYAP1Q96A49 352 aaPredicted RBP16.5■□□□□ 0.23
SNCAIP-204ENST00000395466 RREB1Q92766 1687 aa16.49■□□□□ 0.23
SNCAIP-204ENST00000395466 M0R2C6 588 aa16.49■□□□□ 0.23
SNCAIP-204ENST00000395466 HSPD1P10809 573 aaKnown RBP16.49■□□□□ 0.23
SNCAIP-204ENST00000395466 IL6STP40189 918 aaPredicted RBP16.49■□□□□ 0.23
SNCAIP-204ENST00000395466 CTSWP56202 376 aa16.49■□□□□ 0.23
SNCAIP-204ENST00000395466 UBE2HP62256 183 aa16.49■□□□□ 0.23
SNCAIP-204ENST00000395466 DNM1Q05193 864 aaKnown RBP16.49■□□□□ 0.23
SNCAIP-204ENST00000395466 SCARF1Q14162 830 aa16.49■□□□□ 0.23
SNCAIP-204ENST00000395466 CCDC158Q5M9N0 1113 aa16.49■□□□□ 0.23
SNCAIP-204ENST00000395466 LARP1BQ659C4 914 aaKnown RBP16.49■□□□□ 0.23
SNCAIP-204ENST00000395466 Q6ZUG5 572 aa16.49■□□□□ 0.23
SNCAIP-204ENST00000395466 GTF3C6Q969F1 213 aa16.49■□□□□ 0.23
SNCAIP-204ENST00000395466 GREM2Q9H772 168 aa16.49■□□□□ 0.23
SNCAIP-204ENST00000395466 ABCC12Q96J65 1359 aa16.49■□□□□ 0.23
SNCAIP-204ENST00000395466 LRP5O75197 1615 aa16.49■□□□□ 0.23
SNCAIP-204ENST00000395466 A0A0G2JLW4 131 aa16.48■□□□□ 0.23
SNCAIP-204ENST00000395466 VPS37CA5D8V6 355 aaPredicted RBP16.48■□□□□ 0.23
SNCAIP-204ENST00000395466 ERVV-1B6SEH8 477 aa16.48■□□□□ 0.23
SNCAIP-204ENST00000395466 ITGA6P23229 1130 aa16.48■□□□□ 0.23
SNCAIP-204ENST00000395466 TTC39AQ5SRH9 613 aa16.48■□□□□ 0.23
SNCAIP-204ENST00000395466 CDC37L1Q7L3B6 337 aa16.48■□□□□ 0.23
SNCAIP-204ENST00000395466 LTBP4Q8N2S1 1624 aa16.48■□□□□ 0.23
SNCAIP-204ENST00000395466 MYO5AQ9Y4I1 1855 aaKnown RBP16.48■□□□□ 0.23
SNCAIP-204ENST00000395466 TAF7LQ5H9L4 462 aa16.48■□□□□ 0.23
SNCAIP-204ENST00000395466 OSBP2Q969R2 916 aa16.48■□□□□ 0.23
SNCAIP-204ENST00000395466 SYTL4Q96C24 671 aaPredicted RBP16.48■□□□□ 0.23
SNCAIP-204ENST00000395466 UBN2Q6ZU65 1347 aa16.48■□□□□ 0.23
SNCAIP-204ENST00000395466 MYH14Q7Z406 1995 aaKnown RBP16.48■□□□□ 0.23
SNCAIP-204ENST00000395466 CICQ96RK0 1608 aaPredicted RBP16.47■□□□□ 0.23
SNCAIP-204ENST00000395466 SPATA31A1Q5TZJ5 1347 aa16.47■□□□□ 0.23
SNCAIP-204ENST00000395466 IRS4O14654 1257 aaPredicted RBP16.47■□□□□ 0.23
SNCAIP-204ENST00000395466 FIBPO43427 364 aa16.47■□□□□ 0.23
SNCAIP-204ENST00000395466 PDCP20941 246 aa16.47■□□□□ 0.23
SNCAIP-204ENST00000395466 EXOSC10Q01780 885 aaKnown RBP16.47■□□□□ 0.23
SNCAIP-204ENST00000395466 FKBP4Q02790 459 aaKnown RBP eCLIP16.47■□□□□ 0.23
SNCAIP-204ENST00000395466 STK3Q13188 491 aa16.47■□□□□ 0.23
SNCAIP-204ENST00000395466 ZNF34Q8IZ26 560 aa16.47■□□□□ 0.23
SNCAIP-204ENST00000395466 VGLL2Q8N8G2 317 aa16.47■□□□□ 0.23
SNCAIP-204ENST00000395466 PDLIM2Q96JY6 352 aa16.47■□□□□ 0.23
SNCAIP-204ENST00000395466 AGXT2Q9BYV1 514 aa16.47■□□□□ 0.23
SNCAIP-204ENST00000395466 PHLPP1O60346 1717 aa16.47■□□□□ 0.23
SNCAIP-204ENST00000395466 FOXP2O15409 715 aa16.46■□□□□ 0.23
SNCAIP-204ENST00000395466 DHX32Q7L7V1 743 aaKnown RBP16.46■□□□□ 0.23
SNCAIP-204ENST00000395466 DZIP3Q86Y13 1208 aaKnown RBP16.46■□□□□ 0.23
SNCAIP-204ENST00000395466 CDCA7Q9BWT1 371 aaPredicted RBP16.46■□□□□ 0.23
SNCAIP-204ENST00000395466 HMGB1P09429 215 aaKnown RBP16.46■□□□□ 0.22
SNCAIP-204ENST00000395466 ZAP70P43403 619 aa16.46■□□□□ 0.22
SNCAIP-204ENST00000395466 ATP2B3Q16720 1220 aa16.46■□□□□ 0.22
SNCAIP-204ENST00000395466 GORABQ5T7V8 394 aa16.46■□□□□ 0.22
SNCAIP-204ENST00000395466 TRMT112Q9UI30 125 aaKnown RBP16.46■□□□□ 0.22
SNCAIP-204ENST00000395466 TBC1D2BQ9UPU7 963 aa16.46■□□□□ 0.22
SNCAIP-204ENST00000395466 ARAP2Q8WZ64 1704 aa16.46■□□□□ 0.22
SNCAIP-204ENST00000395466 ANKRD18BA2A2Z9 1011 aa16.45■□□□□ 0.22
SNCAIP-204ENST00000395466 ESPNB1AK53 854 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms