RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 RBM17Q96I25 401 aaKnown RBP23.58■■□□□ 1.37
LMNB1-202ENST00000395354 RTL9Q8NET4 1388 aa23.58■■□□□ 1.36
LMNB1-202ENST00000395354 A0A0G2JLW4 131 aa23.57■■□□□ 1.36
LMNB1-202ENST00000395354 RBM25P49756 843 aaKnown RBP23.57■■□□□ 1.36
LMNB1-202ENST00000395354 ERICH6Q7L0X2 663 aa23.57■■□□□ 1.36
LMNB1-202ENST00000395354 MASTLQ96GX5 879 aa23.57■■□□□ 1.36
LMNB1-202ENST00000395354 KIF13BQ9NQT8 1826 aa23.57■■□□□ 1.36
LMNB1-202ENST00000395354 ZNF622Q969S3 477 aaKnown RBP eCLIP23.57■■□□□ 1.36
LMNB1-202ENST00000395354 PA2G4Q9UQ80 394 aaKnown RBP23.57■■□□□ 1.36
LMNB1-202ENST00000395354 TTC41PQ6P2S7 1318 aa23.56■■□□□ 1.36
LMNB1-202ENST00000395354 DPEP1P16444 411 aa23.56■■□□□ 1.36
LMNB1-202ENST00000395354 RFX5P48382 616 aaPredicted RBP23.56■■□□□ 1.36
LMNB1-202ENST00000395354 CRAMP1Q96RY5 1269 aa23.56■■□□□ 1.36
LMNB1-202ENST00000395354 STYK1Q6J9G0 422 aa23.55■■□□□ 1.36
LMNB1-202ENST00000395354 CDC5LQ99459 802 aaKnown RBP23.55■■□□□ 1.36
LMNB1-202ENST00000395354 FHDC1Q9C0D6 1143 aaPredicted RBP23.55■■□□□ 1.36
LMNB1-202ENST00000395354 ALDH1B1P30837 517 aa23.54■■□□□ 1.36
LMNB1-202ENST00000395354 TAF7LQ5H9L4 462 aa23.54■■□□□ 1.36
LMNB1-202ENST00000395354 CELF1Q92879 486 aaKnown RBP23.54■■□□□ 1.36
LMNB1-202ENST00000395354 ZNF594Q96JF6 807 aaPredicted RBP23.54■■□□□ 1.36
LMNB1-202ENST00000395354 DAXXQ9UER7 740 aaPredicted RBP23.54■■□□□ 1.36
LMNB1-202ENST00000395354 KCNA3P22001 575 aa23.53■■□□□ 1.36
LMNB1-202ENST00000395354 RPS8P62241 208 aaKnown RBP23.53■■□□□ 1.36
LMNB1-202ENST00000395354 KLHDC4Q8TBB5 520 aa23.53■■□□□ 1.36
LMNB1-202ENST00000395354 SASH1O94885 1247 aa23.52■■□□□ 1.36
LMNB1-202ENST00000395354 PTPN12Q05209 780 aaKnown RBP23.52■■□□□ 1.36
LMNB1-202ENST00000395354 GRAPQ13588 217 aa23.52■■□□□ 1.36
LMNB1-202ENST00000395354 ANKRD18AQ8IVF6 992 aa23.52■■□□□ 1.36
LMNB1-202ENST00000395354 GRAPLQ8TC17 118 aaPredicted RBP23.52■■□□□ 1.36
LMNB1-202ENST00000395354 GPATCH3Q96I76 525 aa23.52■■□□□ 1.36
LMNB1-202ENST00000395354 TAF1P21675 1872 aa23.52■■□□□ 1.36
LMNB1-202ENST00000395354 IGHMBP2P38935 993 aaKnown RBP23.52■■□□□ 1.36
LMNB1-202ENST00000395354 BECN1Q14457 450 aa23.52■■□□□ 1.36
LMNB1-202ENST00000395354 PI4K2BQ8TCG2 481 aa23.52■■□□□ 1.36
LMNB1-202ENST00000395354 CNKSR1Q969H4 720 aa23.52■■□□□ 1.36
LMNB1-202ENST00000395354 COL11A2P13942 1736 aaPredicted RBP23.51■■□□□ 1.35
LMNB1-202ENST00000395354 ERC2O15083 957 aa23.51■■□□□ 1.35
LMNB1-202ENST00000395354 BBOX1O75936 387 aa23.51■■□□□ 1.35
LMNB1-202ENST00000395354 IFIT2P09913 472 aaKnown RBP23.51■■□□□ 1.35
LMNB1-202ENST00000395354 NLGN2Q8NFZ4 835 aa23.51■■□□□ 1.35
LMNB1-202ENST00000395354 GLRX3O76003 335 aaKnown RBP23.5■■□□□ 1.35
LMNB1-202ENST00000395354 LDHAL6AQ6ZMR3 332 aa23.5■■□□□ 1.35
LMNB1-202ENST00000395354 MPHOSPH8Q99549 860 aa23.5■■□□□ 1.35
LMNB1-202ENST00000395354 SYT17Q9BSW7 474 aa23.5■■□□□ 1.35
LMNB1-202ENST00000395354 PIM2Q9P1W9 311 aa23.5■■□□□ 1.35
LMNB1-202ENST00000395354 TSHZ3Q63HK5 1081 aa23.49■■□□□ 1.35
LMNB1-202ENST00000395354 SIL1Q9H173 461 aa23.49■■□□□ 1.35
LMNB1-202ENST00000395354 ECHDC1Q9NTX5 307 aa23.49■■□□□ 1.35
LMNB1-202ENST00000395354 TTLL6Q8N841 843 aa23.48■■□□□ 1.35
LMNB1-202ENST00000395354 BSDC1Q9NW68 430 aaPredicted RBP23.48■■□□□ 1.35
LMNB1-202ENST00000395354 COL4A1P02462 1669 aa23.48■■□□□ 1.35
LMNB1-202ENST00000395354 REC8O95072 547 aa23.48■■□□□ 1.35
LMNB1-202ENST00000395354 AACSQ86V21 672 aa23.48■■□□□ 1.35
LMNB1-202ENST00000395354 PUS3Q9BZE2 481 aaKnown RBP23.48■■□□□ 1.35
LMNB1-202ENST00000395354 CNNM1Q9NRU3 951 aa23.48■■□□□ 1.35
LMNB1-202ENST00000395354 KIAA1551Q9HCM1 1747 aa23.47■■□□□ 1.35
LMNB1-202ENST00000395354 TRIM6-TRIM34B2RNG4 842 aa23.47■■□□□ 1.35
LMNB1-202ENST00000395354 EYA2O00167 538 aa23.47■■□□□ 1.35
LMNB1-202ENST00000395354 PRPF40BQ6NWY9 871 aaKnown RBP23.47■■□□□ 1.35
LMNB1-202ENST00000395354 LRP5O75197 1615 aa23.46■■□□□ 1.35
LMNB1-202ENST00000395354 LRRC24Q50LG9 513 aa23.46■■□□□ 1.35
LMNB1-202ENST00000395354 FBXO3Q9UK99 471 aa23.46■■□□□ 1.35
LMNB1-202ENST00000395354 DLEC1Q9Y238 1755 aa23.46■■□□□ 1.35
LMNB1-202ENST00000395354 PPEF1O14829 653 aaPredicted RBP23.45■■□□□ 1.34
LMNB1-202ENST00000395354 TMC4Q7Z404 712 aa23.45■■□□□ 1.34
LMNB1-202ENST00000395354 CNTROBQ8N137 903 aa23.45■■□□□ 1.34
LMNB1-202ENST00000395354 RILPL2Q969X0 211 aa23.45■■□□□ 1.34
LMNB1-202ENST00000395354 EAF2Q96CJ1 260 aaPredicted RBP23.45■■□□□ 1.34
LMNB1-202ENST00000395354 WWC3Q9ULE0 1092 aa23.45■■□□□ 1.34
LMNB1-202ENST00000395354 RIPOR2Q9Y4F9 1068 aa23.45■■□□□ 1.34
LMNB1-202ENST00000395354 CIAO1O76071 339 aa23.44■■□□□ 1.34
LMNB1-202ENST00000395354 CHMLP26374 656 aa23.44■■□□□ 1.34
LMNB1-202ENST00000395354 DALRD3Q5D0E6 543 aaKnown RBP23.44■■□□□ 1.34
LMNB1-202ENST00000395354 ATG9AQ7Z3C6 839 aa23.44■■□□□ 1.34
LMNB1-202ENST00000395354 SP8Q8IXZ3 490 aa23.44■■□□□ 1.34
LMNB1-202ENST00000395354 USP26Q9BXU7 913 aa23.44■■□□□ 1.34
LMNB1-202ENST00000395354 MINPP1Q9UNW1 487 aa23.44■■□□□ 1.34
LMNB1-202ENST00000395354 ATP6V0A2Q9Y487 856 aa23.44■■□□□ 1.34
LMNB1-202ENST00000395354 SLX4Q8IY92 1834 aa23.43■■□□□ 1.34
LMNB1-202ENST00000395354 IL15P40933 162 aaPredicted RBP23.43■■□□□ 1.34
LMNB1-202ENST00000395354 GPR108Q9NPR9 543 aa23.43■■□□□ 1.34
LMNB1-202ENST00000395354 SRCAPQ6ZRS2 3230 aa23.42■■□□□ 1.34
LMNB1-202ENST00000395354 EPB41L2O43491 1005 aaKnown RBP23.42■■□□□ 1.34
LMNB1-202ENST00000395354 ESYT1Q9BSJ8 1104 aa23.42■■□□□ 1.34
LMNB1-202ENST00000395354 TMX4Q9H1E5 349 aaPredicted RBP23.42■■□□□ 1.34
LMNB1-202ENST00000395354 ZNF219Q9P2Y4 722 aaPredicted RBP23.42■■□□□ 1.34
LMNB1-202ENST00000395354 SPEF2Q9C093 1822 aa23.41■■□□□ 1.34
LMNB1-202ENST00000395354 CACNA1SQ13698 1873 aa23.41■■□□□ 1.34
LMNB1-202ENST00000395354 TNNI3KQ59H18 835 aa23.41■■□□□ 1.34
LMNB1-202ENST00000395354 C7orf43Q8WVR3 580 aa23.41■■□□□ 1.34
LMNB1-202ENST00000395354 FPGT-TNNI3KV9GXZ4 949 aa23.41■■□□□ 1.34
LMNB1-202ENST00000395354 MROH5Q6ZUA9 1318 aa23.41■■□□□ 1.34
LMNB1-202ENST00000395354 CHRNDQ07001 517 aa23.4■■□□□ 1.34
LMNB1-202ENST00000395354 TFCP2Q12800 502 aa23.4■■□□□ 1.34
LMNB1-202ENST00000395354 SLC51AQ86UW1 340 aa23.4■■□□□ 1.34
LMNB1-202ENST00000395354 BCS1LQ9Y276 419 aa23.4■■□□□ 1.34
LMNB1-202ENST00000395354 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.4■■□□□ 1.34
LMNB1-202ENST00000395354 C21orf2O43822 256 aa23.4■■□□□ 1.34
LMNB1-202ENST00000395354 METTL24Q5JXM2 366 aa23.4■■□□□ 1.34
LMNB1-202ENST00000395354 OLFM4Q6UX06 510 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms