RNA–Protein interactions for RNA: ENST00000395065.7

NXF3-201, Transcript of nuclear RNA export factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF3, Length 1,938 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-201ENST00000395065 TOB2Q14106 344 aaPredicted RBP7.38□□□□□ -1.23
NXF3-201ENST00000395065 CCDC158Q5M9N0 1113 aa7.38□□□□□ -1.23
NXF3-201ENST00000395065 TRIM65Q6PJ69 517 aa7.38□□□□□ -1.23
NXF3-201ENST00000395065 FBXO18Q8NFZ0 1043 aa7.38□□□□□ -1.23
NXF3-201ENST00000395065 NEK11Q8NG66 645 aa7.38□□□□□ -1.23
NXF3-201ENST00000395065 UBXN4Q92575 508 aa7.38□□□□□ -1.23
NXF3-201ENST00000395065 SMARCE1Q969G3 411 aa7.38□□□□□ -1.23
NXF3-201ENST00000395065 SLC26A8Q96RN1 970 aa7.38□□□□□ -1.23
NXF3-201ENST00000395065 BPIFA3Q9BQP9 254 aa7.38□□□□□ -1.23
NXF3-201ENST00000395065 NPHP4O75161 1426 aaPredicted RBP7.37□□□□□ -1.23
NXF3-201ENST00000395065 NPHP1O15259 732 aa7.37□□□□□ -1.23
NXF3-201ENST00000395065 SASH3O75995 380 aa7.37□□□□□ -1.23
NXF3-201ENST00000395065 CHRM1P11229 460 aaPredicted RBP7.37□□□□□ -1.23
NXF3-201ENST00000395065 ZSCAN26Q16670 478 aa7.37□□□□□ -1.23
NXF3-201ENST00000395065 HSP90AB4PQ58FF6 505 aa7.37□□□□□ -1.23
NXF3-201ENST00000395065 ARMCX5Q6P1M9 558 aa7.37□□□□□ -1.23
NXF3-201ENST00000395065 KRBA2Q6ZNG9 492 aa7.37□□□□□ -1.23
NXF3-201ENST00000395065 GOLGA5Q8TBA6 731 aa7.37□□□□□ -1.23
NXF3-201ENST00000395065 EXOC4Q96A65 974 aa7.37□□□□□ -1.23
NXF3-201ENST00000395065 TRERF1Q96PN7 1200 aa7.37□□□□□ -1.23
NXF3-201ENST00000395065 MIS18AQ9NYP9 233 aa7.37□□□□□ -1.23
NXF3-201ENST00000395065 RBM8AQ9Y5S9 174 aaKnown RBP7.37□□□□□ -1.23
NXF3-201ENST00000395065 JCADQ9P266 1359 aa7.37□□□□□ -1.23
NXF3-201ENST00000395065 MYH15Q9Y2K3 1946 aa7.37□□□□□ -1.23
NXF3-201ENST00000395065 LRRC37A3O60309 1634 aa7.37□□□□□ -1.23
NXF3-201ENST00000395065 PIK3C2AO00443 1686 aa7.37□□□□□ -1.23
NXF3-201ENST00000395065 SLC27A2O14975 620 aa7.37□□□□□ -1.23
NXF3-201ENST00000395065 CCP110O43303 1012 aa7.37□□□□□ -1.23
NXF3-201ENST00000395065 DHX16O60231 1041 aaKnown RBP7.37□□□□□ -1.23
NXF3-201ENST00000395065 RPS6KB1P23443 525 aa7.37□□□□□ -1.23
NXF3-201ENST00000395065 CASQ1P31415 396 aa7.37□□□□□ -1.23
NXF3-201ENST00000395065 COL9A3Q14050 684 aaPredicted RBP7.37□□□□□ -1.23
NXF3-201ENST00000395065 HSP90AB2PQ58FF8 381 aa7.37□□□□□ -1.23
NXF3-201ENST00000395065 ATL3Q6DD88 541 aa7.37□□□□□ -1.23
NXF3-201ENST00000395065 CC2D1AQ6P1N0 951 aaPredicted RBP7.37□□□□□ -1.23
NXF3-201ENST00000395065 SAMD1Q6SPF0 538 aaPredicted RBP7.37□□□□□ -1.23
NXF3-201ENST00000395065 SRLQ86TD4 932 aa7.37□□□□□ -1.23
NXF3-201ENST00000395065 PROM2Q8N271 834 aa7.37□□□□□ -1.23
NXF3-201ENST00000395065 RGS22Q8NE09 1264 aa7.37□□□□□ -1.23
NXF3-201ENST00000395065 TMX1Q9H3N1 280 aa7.37□□□□□ -1.23
NXF3-201ENST00000395065 GEMIN8Q9NWZ8 242 aaKnown RBP7.37□□□□□ -1.23
NXF3-201ENST00000395065 CWC15Q9P013 229 aaKnown RBP7.37□□□□□ -1.23
NXF3-201ENST00000395065 RSPH14Q9UHP6 348 aa7.37□□□□□ -1.23
NXF3-201ENST00000395065 DIP2AQ14689 1571 aa7.36□□□□□ -1.23
NXF3-201ENST00000395065 FANCGO15287 622 aa7.36□□□□□ -1.23
NXF3-201ENST00000395065 OAS2P29728 719 aaKnown RBP7.36□□□□□ -1.23
NXF3-201ENST00000395065 MTX1Q13505 466 aa7.36□□□□□ -1.23
NXF3-201ENST00000395065 SMC1AQ14683 1233 aaKnown RBP7.36□□□□□ -1.23
NXF3-201ENST00000395065 LRRFIP1Q32MZ4 808 aaKnown RBP7.36□□□□□ -1.23
NXF3-201ENST00000395065 BLOC1S2Q6QNY1 142 aa7.36□□□□□ -1.23
NXF3-201ENST00000395065 CEP57L1Q8IYX8 460 aa7.36□□□□□ -1.23
NXF3-201ENST00000395065 MSL3Q8N5Y2 521 aaKnown RBP7.36□□□□□ -1.23
NXF3-201ENST00000395065 GPR161Q8N6U8 529 aaKnown RBP7.36□□□□□ -1.23
NXF3-201ENST00000395065 EVI5LQ96CN4 794 aa7.36□□□□□ -1.23
NXF3-201ENST00000395065 NAT10Q9H0A0 1025 aaKnown RBP7.36□□□□□ -1.23
NXF3-201ENST00000395065 BABAM1Q9NWV8 329 aa7.36□□□□□ -1.23
NXF3-201ENST00000395065 DNAI1Q9UI46 699 aa7.36□□□□□ -1.23
NXF3-201ENST00000395065 KDRP35968 1356 aa7.36□□□□□ -1.23
NXF3-201ENST00000395065 MARF1Q9Y4F3 1742 aaKnown RBP7.35□□□□□ -1.23
NXF3-201ENST00000395065 HIP1O00291 1037 aa7.35□□□□□ -1.23
NXF3-201ENST00000395065 POLR3GO15318 223 aaPredicted RBP7.35□□□□□ -1.23
NXF3-201ENST00000395065 RPS6KA5O75582 802 aa7.35□□□□□ -1.23
NXF3-201ENST00000395065 SFPQP23246 707 aaKnown RBP eCLIP7.35□□□□□ -1.23
NXF3-201ENST00000395065 FAM160A1Q05DH4 1040 aa7.35□□□□□ -1.23
NXF3-201ENST00000395065 PSME1Q06323 249 aa7.35□□□□□ -1.23
NXF3-201ENST00000395065 MTHFSDQ2M296 383 aaKnown RBP7.35□□□□□ -1.23
NXF3-201ENST00000395065 CCAR1Q8IX12 1150 aaKnown RBP7.35□□□□□ -1.23
NXF3-201ENST00000395065 AOPEPQ8N6M6 819 aa7.35□□□□□ -1.23
NXF3-201ENST00000395065 SMARCC2Q8TAQ2 1214 aa7.35□□□□□ -1.23
NXF3-201ENST00000395065 FUT8Q9BYC5 575 aa7.35□□□□□ -1.23
NXF3-201ENST00000395065 GOLPH3LQ9H4A5 285 aa7.35□□□□□ -1.23
NXF3-201ENST00000395065 ZCCHC17Q9NP64 241 aaKnown RBP7.35□□□□□ -1.23
NXF3-201ENST00000395065 ECHDC1Q9NTX5 307 aa7.35□□□□□ -1.23
NXF3-201ENST00000395065 HMG20BQ9P0W2 317 aa7.35□□□□□ -1.23
NXF3-201ENST00000395065 LCMT1Q9UIC8 334 aa7.35□□□□□ -1.23
NXF3-201ENST00000395065 PARP3Q9Y6F1 533 aa7.35□□□□□ -1.23
NXF3-201ENST00000395065 ZNF335Q9H4Z2 1342 aaPredicted RBP7.35□□□□□ -1.23
NXF3-201ENST00000395065 USP31Q70CQ4 1352 aa7.35□□□□□ -1.23
NXF3-201ENST00000395065 PLEKHG3A1L390 1219 aa7.35□□□□□ -1.23
NXF3-201ENST00000395065 MAP2K7O14733 419 aa7.35□□□□□ -1.23
NXF3-201ENST00000395065 SRGAP3O43295 1099 aa7.35□□□□□ -1.23
NXF3-201ENST00000395065 NRDCO43847 1150 aa7.35□□□□□ -1.23
NXF3-201ENST00000395065 SEC31AO94979 1220 aaKnown RBP7.35□□□□□ -1.23
NXF3-201ENST00000395065 ACTN2P35609 894 aa7.35□□□□□ -1.23
NXF3-201ENST00000395065 USPL1Q5W0Q7 1092 aa7.35□□□□□ -1.23
NXF3-201ENST00000395065 RSRC2Q7L4I2 434 aaKnown RBP7.35□□□□□ -1.23
NXF3-201ENST00000395065 FCHSD1Q86WN1 690 aa7.35□□□□□ -1.23
NXF3-201ENST00000395065 CCDC191Q8NCU4 936 aa7.35□□□□□ -1.23
NXF3-201ENST00000395065 BRF1Q92994 677 aa7.35□□□□□ -1.23
NXF3-201ENST00000395065 XPO4Q9C0E2 1151 aaKnown RBP7.35□□□□□ -1.23
NXF3-201ENST00000395065 ADAM21Q9UKJ8 722 aa7.35□□□□□ -1.23
NXF3-201ENST00000395065 SLIT1O75093 1534 aa7.34□□□□□ -1.23
NXF3-201ENST00000395065 CEP170BQ9Y4F5 1589 aaPredicted RBP7.34□□□□□ -1.23
NXF3-201ENST00000395065 PLEKHG2Q9H7P9 1386 aa7.34□□□□□ -1.23
NXF3-201ENST00000395065 MED23Q9ULK4 1368 aa7.34□□□□□ -1.23
NXF3-201ENST00000395065 TRIM66O15016 1216 aa7.34□□□□□ -1.23
NXF3-201ENST00000395065 FOXO3O43524 673 aa7.34□□□□□ -1.23
NXF3-201ENST00000395065 TNNT3P45378 269 aaPredicted RBP7.34□□□□□ -1.23
NXF3-201ENST00000395065 MAP3K9P80192 1104 aa7.34□□□□□ -1.23
NXF3-201ENST00000395065 TMEM132AQ24JP5 1023 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms