RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 TFIP11Q9UBB9 837 aaKnown RBP11.79□□□□□ -0.52
UBE2D3-208ENST00000394803 BECN2A8MW95 431 aa11.79□□□□□ -0.52
UBE2D3-208ENST00000394803 NRDCO43847 1150 aa11.79□□□□□ -0.52
UBE2D3-208ENST00000394803 PPP4R3BQ5MIZ7 849 aa11.79□□□□□ -0.52
UBE2D3-208ENST00000394803 ANKRD13DQ6ZTN6 518 aa11.79□□□□□ -0.52
UBE2D3-208ENST00000394803 DHX32Q7L7V1 743 aaKnown RBP11.79□□□□□ -0.52
UBE2D3-208ENST00000394803 C17orf53Q8N3J3 647 aaPredicted RBP11.79□□□□□ -0.52
UBE2D3-208ENST00000394803 CCDC112Q8NEF3 446 aa11.79□□□□□ -0.52
UBE2D3-208ENST00000394803 SLC52A2Q9HAB3 445 aa11.79□□□□□ -0.52
UBE2D3-208ENST00000394803 GPR108Q9NPR9 543 aa11.79□□□□□ -0.52
UBE2D3-208ENST00000394803 RCOR1Q9UKL0 485 aa11.79□□□□□ -0.52
UBE2D3-208ENST00000394803 AFDNP55196 1824 aaKnown RBP11.79□□□□□ -0.52
UBE2D3-208ENST00000394803 MST1RQ04912 1400 aa11.78□□□□□ -0.52
UBE2D3-208ENST00000394803 NR1I2O75469 434 aa11.78□□□□□ -0.52
UBE2D3-208ENST00000394803 GSDMDP57764 484 aa11.78□□□□□ -0.52
UBE2D3-208ENST00000394803 PDIA6Q15084 440 aa11.78□□□□□ -0.52
UBE2D3-208ENST00000394803 ZNF589Q86UQ0 364 aaPredicted RBP11.78□□□□□ -0.52
UBE2D3-208ENST00000394803 KBTBD3Q8NAB2 608 aa11.78□□□□□ -0.52
UBE2D3-208ENST00000394803 RGS22Q8NE09 1264 aa11.78□□□□□ -0.52
UBE2D3-208ENST00000394803 DDX54Q8TDD1 881 aaKnown RBP11.78□□□□□ -0.52
UBE2D3-208ENST00000394803 MYD88Q99836 296 aa11.78□□□□□ -0.52
UBE2D3-208ENST00000394803 ZNF142P52746 1687 aaPredicted RBP11.78□□□□□ -0.52
UBE2D3-208ENST00000394803 C5P01031 1676 aa11.78□□□□□ -0.52
UBE2D3-208ENST00000394803 TUBB4AP04350 444 aa11.78□□□□□ -0.52
UBE2D3-208ENST00000394803 TNNT1P13805 278 aa11.78□□□□□ -0.52
UBE2D3-208ENST00000394803 TPM4P67936 248 aa11.78□□□□□ -0.52
UBE2D3-208ENST00000394803 DMTNQ08495 405 aa11.78□□□□□ -0.52
UBE2D3-208ENST00000394803 ZRSR1Q15695 479 aaKnown RBP11.78□□□□□ -0.52
UBE2D3-208ENST00000394803 TPD52L1Q16890 204 aaPredicted RBP11.78□□□□□ -0.52
UBE2D3-208ENST00000394803 CEP57L1Q8IYX8 460 aa11.78□□□□□ -0.52
UBE2D3-208ENST00000394803 TTC5Q8N0Z6 440 aa11.78□□□□□ -0.52
UBE2D3-208ENST00000394803 DNAJC25Q9H1X3 360 aa11.78□□□□□ -0.52
UBE2D3-208ENST00000394803 SNRPA1P09661 255 aaKnown RBP11.77□□□□□ -0.53
UBE2D3-208ENST00000394803 TATP17735 454 aaPredicted RBP11.77□□□□□ -0.53
UBE2D3-208ENST00000394803 FAM160A1Q05DH4 1040 aa11.77□□□□□ -0.53
UBE2D3-208ENST00000394803 FAM173BQ6P4H8 233 aa11.77□□□□□ -0.53
UBE2D3-208ENST00000394803 XAGE3Q8WTP9 111 aa11.77□□□□□ -0.53
UBE2D3-208ENST00000394803 PGBD1Q96JS3 809 aa11.77□□□□□ -0.53
UBE2D3-208ENST00000394803 DBNLQ9UJU6 430 aaKnown RBP11.77□□□□□ -0.53
UBE2D3-208ENST00000394803 DHX16O60231 1041 aaKnown RBP11.76□□□□□ -0.53
UBE2D3-208ENST00000394803 HSPA2P54652 639 aa11.76□□□□□ -0.53
UBE2D3-208ENST00000394803 COPS6Q7L5N1 327 aa11.76□□□□□ -0.53
UBE2D3-208ENST00000394803 ZNF274Q96GC6 653 aaPredicted RBP11.76□□□□□ -0.53
UBE2D3-208ENST00000394803 TCEANC2Q96MN5 208 aa11.76□□□□□ -0.53
UBE2D3-208ENST00000394803 ZNF609O15014 1411 aa11.76□□□□□ -0.53
UBE2D3-208ENST00000394803 RFX5P48382 616 aaPredicted RBP11.76□□□□□ -0.53
UBE2D3-208ENST00000394803 RBM6P78332 1123 aaKnown RBP11.76□□□□□ -0.53
UBE2D3-208ENST00000394803 PTPN12Q05209 780 aaKnown RBP11.76□□□□□ -0.53
UBE2D3-208ENST00000394803 TFCP2Q12800 502 aa11.76□□□□□ -0.53
UBE2D3-208ENST00000394803 CCAR1Q8IX12 1150 aaKnown RBP11.76□□□□□ -0.53
UBE2D3-208ENST00000394803 DNAJC2Q99543 621 aaKnown RBP11.76□□□□□ -0.53
UBE2D3-208ENST00000394803 AGXT2Q9BYV1 514 aa11.76□□□□□ -0.53
UBE2D3-208ENST00000394803 KCND1Q9NSA2 647 aa11.76□□□□□ -0.53
UBE2D3-208ENST00000394803 IMPACTQ9P2X3 320 aa11.76□□□□□ -0.53
UBE2D3-208ENST00000394803 LAMB4A4D0S4 1761 aa11.76□□□□□ -0.53
UBE2D3-208ENST00000394803 ARFGEF2Q9Y6D5 1785 aa11.76□□□□□ -0.53
UBE2D3-208ENST00000394803 TRPM3Q9HCF6 1732 aaPredicted RBP11.75□□□□□ -0.53
UBE2D3-208ENST00000394803 JAK2O60674 1132 aa11.75□□□□□ -0.53
UBE2D3-208ENST00000394803 CYP21A2P08686 494 aa11.75□□□□□ -0.53
UBE2D3-208ENST00000394803 IFNL2Q8IZJ0 200 aa11.75□□□□□ -0.53
UBE2D3-208ENST00000394803 FBXL16Q8N461 479 aa11.75□□□□□ -0.53
UBE2D3-208ENST00000394803 FMNL2Q96PY5 1086 aa11.75□□□□□ -0.53
UBE2D3-208ENST00000394803 OGFRQ9NZT2 677 aa11.75□□□□□ -0.53
UBE2D3-208ENST00000394803 PTPDC1A2A3K4 754 aa11.75□□□□□ -0.53
UBE2D3-208ENST00000394803 KIF20AO95235 890 aa11.75□□□□□ -0.53
UBE2D3-208ENST00000394803 MYL6BP14649 208 aa11.75□□□□□ -0.53
UBE2D3-208ENST00000394803 SCRN1Q12765 414 aa11.75□□□□□ -0.53
UBE2D3-208ENST00000394803 IQCB1Q15051 598 aa11.75□□□□□ -0.53
UBE2D3-208ENST00000394803 LRRC8AQ8IWT6 810 aa11.75□□□□□ -0.53
UBE2D3-208ENST00000394803 NSUN7Q8NE18 718 aaKnown RBP11.75□□□□□ -0.53
UBE2D3-208ENST00000394803 CTNNA3Q9UI47 895 aa11.75□□□□□ -0.53
UBE2D3-208ENST00000394803 ERBB3P21860 1342 aa11.75□□□□□ -0.53
UBE2D3-208ENST00000394803 A0A1W2PQ27 194 aa11.74□□□□□ -0.53
UBE2D3-208ENST00000394803 A0A1W2PQ64 194 aa11.74□□□□□ -0.53
UBE2D3-208ENST00000394803 A0A1W2PQD8 194 aa11.74□□□□□ -0.53
UBE2D3-208ENST00000394803 PTPN14Q15678 1187 aa11.74□□□□□ -0.53
UBE2D3-208ENST00000394803 CEP135Q66GS9 1140 aa11.74□□□□□ -0.53
UBE2D3-208ENST00000394803 PLBD2Q8NHP8 589 aa11.74□□□□□ -0.53
UBE2D3-208ENST00000394803 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.74□□□□□ -0.53
UBE2D3-208ENST00000394803 C16orf45Q96MC5 204 aaPredicted RBP11.74□□□□□ -0.53
UBE2D3-208ENST00000394803 BPIFA3Q9BQP9 254 aa11.74□□□□□ -0.53
UBE2D3-208ENST00000394803 PRDM4Q9UKN5 801 aa11.74□□□□□ -0.53
UBE2D3-208ENST00000394803 LAMA4Q16363 1823 aa11.74□□□□□ -0.53
UBE2D3-208ENST00000394803 PRAMEF22A3QJZ6 481 aa11.74□□□□□ -0.53
UBE2D3-208ENST00000394803 CCP110O43303 1012 aa11.74□□□□□ -0.53
UBE2D3-208ENST00000394803 IL15P40933 162 aaPredicted RBP11.74□□□□□ -0.53
UBE2D3-208ENST00000394803 MRPS27Q92552 414 aaKnown RBP11.74□□□□□ -0.53
UBE2D3-208ENST00000394803 DCAF5Q96JK2 942 aa11.74□□□□□ -0.53
UBE2D3-208ENST00000394803 PAG1Q9NWQ8 432 aa11.74□□□□□ -0.53
UBE2D3-208ENST00000394803 A0A087WZG4 1122 aa11.73□□□□□ -0.53
UBE2D3-208ENST00000394803 PHKG2P15735 406 aa11.73□□□□□ -0.53
UBE2D3-208ENST00000394803 ME1P48163 572 aa11.73□□□□□ -0.53
UBE2D3-208ENST00000394803 EXOSC10Q01780 885 aaKnown RBP11.73□□□□□ -0.53
UBE2D3-208ENST00000394803 BRAPQ7Z569 592 aa11.73□□□□□ -0.53
UBE2D3-208ENST00000394803 CCDC150Q8NCX0 1101 aa11.73□□□□□ -0.53
UBE2D3-208ENST00000394803 KCNG4Q8TDN1 519 aa11.73□□□□□ -0.53
UBE2D3-208ENST00000394803 DDX11Q96FC9 970 aa11.73□□□□□ -0.53
UBE2D3-208ENST00000394803 ATG3Q9NT62 314 aa11.73□□□□□ -0.53
UBE2D3-208ENST00000394803 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.73□□□□□ -0.53
UBE2D3-208ENST00000394803 TMEM94Q12767 1356 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms