RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 KIF20AO95235 890 aa10.31□□□□□ -0.76
RTN4-206ENST00000394611 MARCKSP29966 332 aaPredicted RBP10.31□□□□□ -0.76
RTN4-206ENST00000394611 CCDC129Q6ZRS4 1044 aa10.31□□□□□ -0.76
RTN4-206ENST00000394611 PI4KAP1Q8N8J0 262 aa10.31□□□□□ -0.76
RTN4-206ENST00000394611 NCOA5Q9HCD5 579 aaKnown RBP10.31□□□□□ -0.76
RTN4-206ENST00000394611 AXIN2Q9Y2T1 843 aa10.31□□□□□ -0.76
RTN4-206ENST00000394611 PEAK1Q9H792 1746 aa10.31□□□□□ -0.76
RTN4-206ENST00000394611 AATKQ6ZMQ8 1374 aa10.31□□□□□ -0.76
RTN4-206ENST00000394611 NCBP1Q09161 790 aaKnown RBP10.31□□□□□ -0.76
RTN4-206ENST00000394611 NOC3LQ8WTT2 800 aaKnown RBP10.31□□□□□ -0.76
RTN4-206ENST00000394611 PRDM11Q9NQV5 511 aa10.31□□□□□ -0.76
RTN4-206ENST00000394611 PUF60Q9UHX1 559 aaKnown RBP10.31□□□□□ -0.76
RTN4-206ENST00000394611 RBM8AQ9Y5S9 174 aaKnown RBP10.31□□□□□ -0.76
RTN4-206ENST00000394611 SNX14Q9Y5W7 946 aa10.31□□□□□ -0.76
RTN4-206ENST00000394611 PDCP20941 246 aa10.31□□□□□ -0.76
RTN4-206ENST00000394611 HSP90B2PQ58FF3 399 aa10.31□□□□□ -0.76
RTN4-206ENST00000394611 KRBA2Q6ZNG9 492 aa10.31□□□□□ -0.76
RTN4-206ENST00000394611 RIC3Q7Z5B4 369 aa10.31□□□□□ -0.76
RTN4-206ENST00000394611 CCDC191Q8NCU4 936 aa10.31□□□□□ -0.76
RTN4-206ENST00000394611 RHPN1Q8TCX5 695 aa10.31□□□□□ -0.76
RTN4-206ENST00000394611 IL25Q9H293 177 aa10.31□□□□□ -0.76
RTN4-206ENST00000394611 GNG11P61952 73 aa10.3□□□□□ -0.76
RTN4-206ENST00000394611 ZSCAN25Q6NSZ9 544 aa10.3□□□□□ -0.76
RTN4-206ENST00000394611 DDX46Q7L014 1031 aaKnown RBP10.3□□□□□ -0.76
RTN4-206ENST00000394611 IFNKQ9P0W0 207 aa10.3□□□□□ -0.76
RTN4-206ENST00000394611 COL22A1Q8NFW1 1626 aaPredicted RBP10.3□□□□□ -0.76
RTN4-206ENST00000394611 PTH1RQ03431 593 aa10.3□□□□□ -0.76
RTN4-206ENST00000394611 LEKR1Q6ZMV7 388 aa10.3□□□□□ -0.76
RTN4-206ENST00000394611 KIAA1524Q8TCG1 905 aa10.3□□□□□ -0.76
RTN4-206ENST00000394611 SNRKQ9NRH2 765 aa10.3□□□□□ -0.76
RTN4-206ENST00000394611 SHPRHQ149N8 1683 aa10.3□□□□□ -0.76
RTN4-206ENST00000394611 RXRAP19793 462 aa10.3□□□□□ -0.76
RTN4-206ENST00000394611 HOXC9P31274 260 aa10.3□□□□□ -0.76
RTN4-206ENST00000394611 RUFY3Q7L099 469 aa10.3□□□□□ -0.76
RTN4-206ENST00000394611 KCNF1Q9H3M0 494 aa10.3□□□□□ -0.76
RTN4-206ENST00000394611 CALCOCO1Q9P1Z2 691 aa10.3□□□□□ -0.76
RTN4-206ENST00000394611 RSPH14Q9UHP6 348 aa10.3□□□□□ -0.76
RTN4-206ENST00000394611 DNAJC21Q5F1R6 531 aaKnown RBP10.29□□□□□ -0.76
RTN4-206ENST00000394611 RRP12Q5JTH9 1297 aaKnown RBP10.29□□□□□ -0.76
RTN4-206ENST00000394611 SMTNL1A8MU46 457 aa10.29□□□□□ -0.76
RTN4-206ENST00000394611 FKBP4Q02790 459 aaKnown RBP eCLIP10.29□□□□□ -0.76
RTN4-206ENST00000394611 SF3A3Q12874 501 aaKnown RBP eCLIP10.29□□□□□ -0.76
RTN4-206ENST00000394611 UVSSAQ2YD98 709 aa10.29□□□□□ -0.76
RTN4-206ENST00000394611 TAF7LQ5H9L4 462 aa10.29□□□□□ -0.76
RTN4-206ENST00000394611 CENPHQ9H3R5 247 aa10.29□□□□□ -0.76
RTN4-206ENST00000394611 DHX8Q14562 1220 aaKnown RBP10.29□□□□□ -0.76
RTN4-206ENST00000394611 CWF19L2Q2TBE0 894 aaKnown RBP10.29□□□□□ -0.76
RTN4-206ENST00000394611 CARD6Q9BX69 1037 aa10.29□□□□□ -0.76
RTN4-206ENST00000394611 RGPD5Q99666 1765 aa10.29□□□□□ -0.76
RTN4-206ENST00000394611 H0YHG0 523 aa10.29□□□□□ -0.76
RTN4-206ENST00000394611 SLU7O95391 586 aaKnown RBP10.29□□□□□ -0.76
RTN4-206ENST00000394611 CSB-PGBD3P0DP91 1061 aa10.29□□□□□ -0.76
RTN4-206ENST00000394611 PSMA5P28066 241 aa10.29□□□□□ -0.76
RTN4-206ENST00000394611 ME3Q16798 604 aa10.29□□□□□ -0.76
RTN4-206ENST00000394611 LONRF3Q496Y0 759 aa10.29□□□□□ -0.76
RTN4-206ENST00000394611 NFXL1Q6ZNB6 911 aa10.29□□□□□ -0.76
RTN4-206ENST00000394611 PCMTD1Q96MG8 357 aaPredicted RBP10.29□□□□□ -0.76
RTN4-206ENST00000394611 NAT10Q9H0A0 1025 aaKnown RBP10.29□□□□□ -0.76
RTN4-206ENST00000394611 AKAP17AQ02040 695 aaKnown RBP10.28□□□□□ -0.76
RTN4-206ENST00000394611 UTP14AQ9BVJ6 771 aaKnown RBP10.28□□□□□ -0.76
RTN4-206ENST00000394611 LZTFL1Q9NQ48 299 aa10.28□□□□□ -0.76
RTN4-206ENST00000394611 LRP6O75581 1613 aa10.28□□□□□ -0.76
RTN4-206ENST00000394611 FAM170AA1A519 330 aa10.28□□□□□ -0.76
RTN4-206ENST00000394611 FBXO38Q6PIJ6 1188 aa10.28□□□□□ -0.76
RTN4-206ENST00000394611 MPRIPQ6WCQ1 1025 aa10.28□□□□□ -0.76
RTN4-206ENST00000394611 IP6K1Q92551 441 aa10.28□□□□□ -0.76
RTN4-206ENST00000394611 C8orf37Q96NL8 207 aa10.28□□□□□ -0.76
RTN4-206ENST00000394611 PLEKHF1Q96S99 279 aa10.28□□□□□ -0.76
RTN4-206ENST00000394611 AP5Z1O43299 807 aa10.28□□□□□ -0.76
RTN4-206ENST00000394611 NBPF7P0C2Y1 421 aaPredicted RBP10.28□□□□□ -0.76
RTN4-206ENST00000394611 RHOXF2BP0C7M4 288 aa10.28□□□□□ -0.76
RTN4-206ENST00000394611 GTF2E1P29083 439 aaPredicted RBP10.28□□□□□ -0.76
RTN4-206ENST00000394611 ZNF75DP51815 510 aa10.28□□□□□ -0.76
RTN4-206ENST00000394611 TERF1P54274 439 aa10.28□□□□□ -0.76
RTN4-206ENST00000394611 SPECC1Q5M775 1068 aa10.28□□□□□ -0.76
RTN4-206ENST00000394611 ZNF397Q8NF99 534 aaPredicted RBP10.28□□□□□ -0.76
RTN4-206ENST00000394611 RHOXF2Q9BQY4 288 aa10.28□□□□□ -0.76
RTN4-206ENST00000394611 FLT4P35916 1363 aa10.27□□□□□ -0.76
RTN4-206ENST00000394611 CCDC144BQ3MJ40 725 aa10.27□□□□□ -0.76
RTN4-206ENST00000394611 SCAND2PQ9GZW5 306 aaPredicted RBP10.27□□□□□ -0.76
RTN4-206ENST00000394611 NMIQ13287 307 aaPredicted RBP10.27□□□□□ -0.77
RTN4-206ENST00000394611 KIF1BPQ96EK5 621 aa10.27□□□□□ -0.77
RTN4-206ENST00000394611 FAM107BQ9H098 131 aa10.27□□□□□ -0.77
RTN4-206ENST00000394611 VPS18Q9P253 973 aa10.27□□□□□ -0.77
RTN4-206ENST00000394611 DDIT3P35638 169 aa10.27□□□□□ -0.77
RTN4-206ENST00000394611 EIF4A2Q14240 407 aaKnown RBP10.27□□□□□ -0.77
RTN4-206ENST00000394611 STRN4Q9NRL3 753 aa10.27□□□□□ -0.77
RTN4-206ENST00000394611 BTG4Q9NY30 223 aa10.27□□□□□ -0.77
RTN4-206ENST00000394611 CPDO75976 1380 aa10.27□□□□□ -0.77
RTN4-206ENST00000394611 SPATA31A6Q5VVP1 1343 aa10.26□□□□□ -0.77
RTN4-206ENST00000394611 MEX3CQ5U5Q3 659 aaKnown RBP10.26□□□□□ -0.77
RTN4-206ENST00000394611 ZNF526Q8TF50 670 aaPredicted RBP10.26□□□□□ -0.77
RTN4-206ENST00000394611 BMS1Q14692 1282 aaKnown RBP10.26□□□□□ -0.77
RTN4-206ENST00000394611 CCDC12Q8WUD4 166 aaPredicted RBP10.26□□□□□ -0.77
RTN4-206ENST00000394611 CDK12Q9NYV4 1490 aaPredicted RBP10.26□□□□□ -0.77
RTN4-206ENST00000394611 APOBRQ0VD83 1088 aa10.26□□□□□ -0.77
RTN4-206ENST00000394611 ILDR1Q86SU0 546 aaPredicted RBP10.26□□□□□ -0.77
RTN4-206ENST00000394611 ANKRD24Q8TF21 1146 aa10.26□□□□□ -0.77
RTN4-206ENST00000394611 SEC62Q99442 399 aaKnown RBP10.26□□□□□ -0.77
RTN4-206ENST00000394611 CHPF2Q9P2E5 772 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms