RNA–Protein interactions for RNA: ENST00000394241.3

TGFA-202, Transcript of transforming growth factor alpha, humanhuman

TSL 3

Gene TGFA, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-202ENST00000394241 SH3TC1Q8TE82 1336 aa20.44■□□□□ 0.86
TGFA-202ENST00000394241 IPO8O15397 1037 aaKnown RBP20.43■□□□□ 0.86
TGFA-202ENST00000394241 GRIPAP1Q4V328 841 aa20.43■□□□□ 0.86
TGFA-202ENST00000394241 ARHGAP45Q92619 1136 aa20.43■□□□□ 0.86
TGFA-202ENST00000394241 FRAT1Q92837 279 aaPredicted RBP20.43■□□□□ 0.86
TGFA-202ENST00000394241 ADARB2Q9NS39 739 aaKnown RBP20.43■□□□□ 0.86
TGFA-202ENST00000394241 RCAN3Q9UKA8 241 aa20.43■□□□□ 0.86
TGFA-202ENST00000394241 BEND3Q5T5X7 828 aa20.42■□□□□ 0.86
TGFA-202ENST00000394241 CIAPIN1Q6FI81 312 aa20.42■□□□□ 0.86
TGFA-202ENST00000394241 NIM1KQ8IY84 436 aa20.42■□□□□ 0.86
TGFA-202ENST00000394241 GPRC5DQ9NZD1 345 aa20.42■□□□□ 0.86
TGFA-202ENST00000394241 DDX60Q8IY21 1712 aaKnown RBP20.41■□□□□ 0.86
TGFA-202ENST00000394241 ZBTB38Q8NAP3 1195 aaPredicted RBP20.41■□□□□ 0.86
TGFA-202ENST00000394241 SRCIN1Q9C0H9 1055 aa20.41■□□□□ 0.86
TGFA-202ENST00000394241 ALDH1L1O75891 902 aa20.4■□□□□ 0.86
TGFA-202ENST00000394241 PCCAP05165 728 aaPredicted RBP20.4■□□□□ 0.86
TGFA-202ENST00000394241 ZKSCAN2Q63HK3 967 aa20.4■□□□□ 0.86
TGFA-202ENST00000394241 RPGRQ92834 1020 aaKnown RBP20.4■□□□□ 0.86
TGFA-202ENST00000394241 FAM89AQ96GI7 184 aa20.4■□□□□ 0.86
TGFA-202ENST00000394241 GLIS2Q9BZE0 524 aaPredicted RBP20.4■□□□□ 0.86
TGFA-202ENST00000394241 GCKRQ14397 625 aa20.39■□□□□ 0.85
TGFA-202ENST00000394241 ATF7IPQ6VMQ6 1270 aa20.39■□□□□ 0.85
TGFA-202ENST00000394241 ABCC4O15439 1325 aa20.38■□□□□ 0.85
TGFA-202ENST00000394241 TRIM27P14373 513 aa20.38■□□□□ 0.85
TGFA-202ENST00000394241 HSP90B1P14625 803 aaKnown RBP20.38■□□□□ 0.85
TGFA-202ENST00000394241 HOXA10P31260 410 aaPredicted RBP20.38■□□□□ 0.85
TGFA-202ENST00000394241 NOGQ13253 232 aa20.38■□□□□ 0.85
TGFA-202ENST00000394241 RTL5Q5HYW3 569 aaPredicted RBP20.38■□□□□ 0.85
TGFA-202ENST00000394241 ZNF408Q9H9D4 720 aa20.38■□□□□ 0.85
TGFA-202ENST00000394241 CDHR2Q9BYE9 1310 aa20.37■□□□□ 0.85
TGFA-202ENST00000394241 IRS4O14654 1257 aaPredicted RBP20.37■□□□□ 0.85
TGFA-202ENST00000394241 PPIP5K2O43314 1243 aa20.37■□□□□ 0.85
TGFA-202ENST00000394241 CCT4P50991 539 aaKnown RBP20.37■□□□□ 0.85
TGFA-202ENST00000394241 SOX10P56693 466 aa20.37■□□□□ 0.85
TGFA-202ENST00000394241 SLC10A5Q5PT55 438 aa20.37■□□□□ 0.85
TGFA-202ENST00000394241 PGAP2Q9UHJ9 254 aa20.37■□□□□ 0.85
TGFA-202ENST00000394241 PPEF1O14829 653 aaPredicted RBP20.36■□□□□ 0.85
TGFA-202ENST00000394241 HCLS1P14317 486 aaPredicted RBP20.36■□□□□ 0.85
TGFA-202ENST00000394241 UBE3BQ7Z3V4 1068 aa20.36■□□□□ 0.85
TGFA-202ENST00000394241 SLC51AQ86UW1 340 aa20.36■□□□□ 0.85
TGFA-202ENST00000394241 NLRP3Q96P20 1036 aa20.36■□□□□ 0.85
TGFA-202ENST00000394241 ZIC5Q96T25 663 aa20.36■□□□□ 0.85
TGFA-202ENST00000394241 AOC3Q16853 763 aa20.35■□□□□ 0.85
TGFA-202ENST00000394241 FTSJ3Q8IY81 847 aaKnown RBP20.35■□□□□ 0.85
TGFA-202ENST00000394241 CRAMP1Q96RY5 1269 aa20.35■□□□□ 0.85
TGFA-202ENST00000394241 C9orf78Q9NZ63 289 aaPredicted RBP20.35■□□□□ 0.85
TGFA-202ENST00000394241 MYH3P11055 1940 aa20.35■□□□□ 0.85
TGFA-202ENST00000394241 H7C1W4 665 aa20.34■□□□□ 0.85
TGFA-202ENST00000394241 GRM8O00222 908 aa20.34■□□□□ 0.85
TGFA-202ENST00000394241 GMPSP49915 693 aaPredicted RBP20.34■□□□□ 0.85
TGFA-202ENST00000394241 CXCL9Q07325 125 aa20.34■□□□□ 0.85
TGFA-202ENST00000394241 PRPF38BQ5VTL8 546 aaKnown RBP20.34■□□□□ 0.85
TGFA-202ENST00000394241 ZC3H15Q8WU90 426 aaKnown RBP20.34■□□□□ 0.85
TGFA-202ENST00000394241 JARID2Q92833 1246 aaPredicted RBP20.34■□□□□ 0.85
TGFA-202ENST00000394241 RBM17Q96I25 401 aaKnown RBP20.34■□□□□ 0.85
TGFA-202ENST00000394241 VPS33BQ9H267 617 aa20.34■□□□□ 0.85
TGFA-202ENST00000394241 CDC37L1Q7L3B6 337 aa20.33■□□□□ 0.85
TGFA-202ENST00000394241 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.33■□□□□ 0.85
TGFA-202ENST00000394241 CLUAP1Q96AJ1 413 aa20.33■□□□□ 0.85
TGFA-202ENST00000394241 ZNRF3Q9ULT6 936 aa20.33■□□□□ 0.85
TGFA-202ENST00000394241 TNNQ9UQP3 1299 aa20.33■□□□□ 0.85
TGFA-202ENST00000394241 PDE8AO60658 829 aa20.32■□□□□ 0.84
TGFA-202ENST00000394241 HUNKP57058 714 aa20.32■□□□□ 0.84
TGFA-202ENST00000394241 C3orf67Q6ZVT6 689 aa20.32■□□□□ 0.84
TGFA-202ENST00000394241 DZIP1LQ8IYY4 767 aaKnown RBP20.32■□□□□ 0.84
TGFA-202ENST00000394241 TMX4Q9H1E5 349 aaPredicted RBP20.32■□□□□ 0.84
TGFA-202ENST00000394241 HIRAP54198 1017 aaPredicted RBP20.31■□□□□ 0.84
TGFA-202ENST00000394241 CASP7P55210 303 aa20.31■□□□□ 0.84
TGFA-202ENST00000394241 INTS3Q68E01 1043 aaKnown RBP20.31■□□□□ 0.84
TGFA-202ENST00000394241 SAGE1Q9NXZ1 904 aa20.31■□□□□ 0.84
TGFA-202ENST00000394241 AKAP11Q9UKA4 1901 aa20.3■□□□□ 0.84
TGFA-202ENST00000394241 MS4A1P11836 297 aa20.3■□□□□ 0.84
TGFA-202ENST00000394241 UTYO14607 1347 aa20.29■□□□□ 0.84
TGFA-202ENST00000394241 CTSWP56202 376 aa20.29■□□□□ 0.84
TGFA-202ENST00000394241 SF3B3Q15393 1217 aaKnown RBP20.29■□□□□ 0.84
TGFA-202ENST00000394241 TMEM57Q8N5G2 664 aa20.29■□□□□ 0.84
TGFA-202ENST00000394241 SUPT20HQ8NEM7 779 aa20.29■□□□□ 0.84
TGFA-202ENST00000394241 TRPM4Q8TD43 1214 aa20.29■□□□□ 0.84
TGFA-202ENST00000394241 PLA2G12BQ9BX93 195 aa20.29■□□□□ 0.84
TGFA-202ENST00000394241 ATP6V0A2Q9Y487 856 aa20.29■□□□□ 0.84
TGFA-202ENST00000394241 NBPF7P0C2Y1 421 aaPredicted RBP20.28■□□□□ 0.84
TGFA-202ENST00000394241 CCDC152Q4G0S7 254 aa20.28■□□□□ 0.84
TGFA-202ENST00000394241 DDX46Q7L014 1031 aaKnown RBP20.28■□□□□ 0.84
TGFA-202ENST00000394241 FAM155AB1AL88 458 aaPredicted RBP20.27■□□□□ 0.84
TGFA-202ENST00000394241 PLIN1O60240 522 aa20.27■□□□□ 0.84
TGFA-202ENST00000394241 TNIP1Q15025 636 aa20.27■□□□□ 0.84
TGFA-202ENST00000394241 RGMBQ6NW40 437 aa20.27■□□□□ 0.84
TGFA-202ENST00000394241 USP48Q86UV5 1035 aa20.27■□□□□ 0.84
TGFA-202ENST00000394241 RTFDC1Q9BY42 306 aaPredicted RBP20.27■□□□□ 0.84
TGFA-202ENST00000394241 USP44Q9H0E7 712 aa20.27■□□□□ 0.84
TGFA-202ENST00000394241 RAD17O75943 681 aa20.26■□□□□ 0.83
TGFA-202ENST00000394241 RLBP1P12271 317 aa20.26■□□□□ 0.83
TGFA-202ENST00000394241 ITPRIPQ8IWB1 547 aa20.26■□□□□ 0.83
TGFA-202ENST00000394241 CNOT7Q9UIV1 285 aaKnown RBP20.26■□□□□ 0.83
TGFA-202ENST00000394241 POLR2AP24928 1970 aaKnown RBP20.26■□□□□ 0.83
TGFA-202ENST00000394241 RTL9Q8NET4 1388 aa20.25■□□□□ 0.83
TGFA-202ENST00000394241 TRPA1O75762 1119 aa20.25■□□□□ 0.83
TGFA-202ENST00000394241 UBTFL1P0CB47 393 aaPredicted RBP20.25■□□□□ 0.83
TGFA-202ENST00000394241 KIF23Q02241 960 aaPredicted RBP20.25■□□□□ 0.83
TGFA-202ENST00000394241 PANK1Q8TE04 598 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms