RNA–Protein interactions for RNA: ENST00000394154.2

VTI1BP2-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 2, humanhuman

BASIC

Gene VTI1BP2, Length 696 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP2-201ENST00000394154 TRIM17Q9Y577 477 aa14.31□□□□□ -0.12
VTI1BP2-201ENST00000394154 DDX60Q8IY21 1712 aaKnown RBP14.31□□□□□ -0.12
VTI1BP2-201ENST00000394154 MAPK8IP3Q9UPT6 1336 aa14.31□□□□□ -0.12
VTI1BP2-201ENST00000394154 TRIOBPQ9H2D6 2365 aa14.31□□□□□ -0.12
VTI1BP2-201ENST00000394154 EN2P19622 333 aaPredicted RBP14.3□□□□□ -0.12
VTI1BP2-201ENST00000394154 KIAA0100Q14667 2235 aaKnown RBP14.3□□□□□ -0.12
VTI1BP2-201ENST00000394154 ANKRD36CQ5JPF3 1778 aa14.29□□□□□ -0.12
VTI1BP2-201ENST00000394154 A0A0C4DFX4 3053 aa14.29□□□□□ -0.12
VTI1BP2-201ENST00000394154 SLC10A5Q5PT55 438 aa14.29□□□□□ -0.12
VTI1BP2-201ENST00000394154 OTOP1Q7RTM1 612 aa14.29□□□□□ -0.12
VTI1BP2-201ENST00000394154 ZNF34Q8IZ26 560 aa14.29□□□□□ -0.12
VTI1BP2-201ENST00000394154 OTUD5Q96G74 571 aa14.29□□□□□ -0.12
VTI1BP2-201ENST00000394154 PLEKHF1Q96S99 279 aa14.29□□□□□ -0.12
VTI1BP2-201ENST00000394154 RSPH6AQ9H0K4 717 aa14.29□□□□□ -0.12
VTI1BP2-201ENST00000394154 LRRC37AA6NMS7 1700 aa14.28□□□□□ -0.12
VTI1BP2-201ENST00000394154 ASTN2O75129 1339 aaPredicted RBP14.28□□□□□ -0.12
VTI1BP2-201ENST00000394154 PRKAR2BP31323 418 aa14.28□□□□□ -0.12
VTI1BP2-201ENST00000394154 LAMB2P55268 1798 aa14.28□□□□□ -0.12
VTI1BP2-201ENST00000394154 WASHC4Q2M389 1173 aa14.28□□□□□ -0.12
VTI1BP2-201ENST00000394154 PARP10Q53GL7 1025 aa14.28□□□□□ -0.12
VTI1BP2-201ENST00000394154 TMC4Q7Z404 712 aa14.28□□□□□ -0.12
VTI1BP2-201ENST00000394154 ARMC5Q96C12 935 aa14.28□□□□□ -0.12
VTI1BP2-201ENST00000394154 DBNDD1Q9H9R9 158 aa14.28□□□□□ -0.12
VTI1BP2-201ENST00000394154 ALDH1A1P00352 501 aa14.27□□□□□ -0.13
VTI1BP2-201ENST00000394154 ANGEL2Q5VTE6 544 aaKnown RBP14.27□□□□□ -0.13
VTI1BP2-201ENST00000394154 TTLL7Q6ZT98 887 aa14.27□□□□□ -0.13
VTI1BP2-201ENST00000394154 DDX46Q7L014 1031 aaKnown RBP14.27□□□□□ -0.13
VTI1BP2-201ENST00000394154 R3HDMLQ9H3Y0 253 aa14.27□□□□□ -0.13
VTI1BP2-201ENST00000394154 ZBTB3Q9H5J0 574 aa14.27□□□□□ -0.13
VTI1BP2-201ENST00000394154 COL6A3P12111 3177 aa14.26□□□□□ -0.13
VTI1BP2-201ENST00000394154 RTL9Q8NET4 1388 aa14.26□□□□□ -0.13
VTI1BP2-201ENST00000394154 PITPNM2Q9BZ72 1349 aa14.26□□□□□ -0.13
VTI1BP2-201ENST00000394154 H0YGN5 161 aa14.26□□□□□ -0.13
VTI1BP2-201ENST00000394154 UBE2Q2LH0YL09 131 aa14.26□□□□□ -0.13
VTI1BP2-201ENST00000394154 ECE2O60344 883 aa14.26□□□□□ -0.13
VTI1BP2-201ENST00000394154 MNX1P50219 401 aaPredicted RBP14.26□□□□□ -0.13
VTI1BP2-201ENST00000394154 GRAPQ13588 217 aa14.26□□□□□ -0.13
VTI1BP2-201ENST00000394154 NEUROD2Q15784 382 aa14.26□□□□□ -0.13
VTI1BP2-201ENST00000394154 GIGYF2Q6Y7W6 1299 aaKnown RBP14.26□□□□□ -0.13
VTI1BP2-201ENST00000394154 MOB2Q70IA6 237 aa14.26□□□□□ -0.13
VTI1BP2-201ENST00000394154 GRAPLQ8TC17 118 aaPredicted RBP14.26□□□□□ -0.13
VTI1BP2-201ENST00000394154 UTP14AQ9BVJ6 771 aaKnown RBP14.26□□□□□ -0.13
VTI1BP2-201ENST00000394154 TMEM106CQ9BVX2 250 aa14.26□□□□□ -0.13
VTI1BP2-201ENST00000394154 TMPOP42166 694 aaKnown RBP14.25□□□□□ -0.13
VTI1BP2-201ENST00000394154 MKRN3Q13064 507 aaKnown RBP14.25□□□□□ -0.13
VTI1BP2-201ENST00000394154 SCARF1Q14162 830 aa14.25□□□□□ -0.13
VTI1BP2-201ENST00000394154 CCDC27Q2M243 656 aa14.25□□□□□ -0.13
VTI1BP2-201ENST00000394154 RTF1Q92541 710 aaKnown RBP14.25□□□□□ -0.13
VTI1BP2-201ENST00000394154 PTPN22Q9Y2R2 807 aa14.25□□□□□ -0.13
VTI1BP2-201ENST00000394154 CUL9Q8IWT3 2517 aa14.25□□□□□ -0.13
VTI1BP2-201ENST00000394154 VIL1P09327 827 aaKnown RBP14.24□□□□□ -0.13
VTI1BP2-201ENST00000394154 GOLGA2Q08379 1002 aa14.24□□□□□ -0.13
VTI1BP2-201ENST00000394154 TTLL12Q14166 644 aaPredicted RBP14.24□□□□□ -0.13
VTI1BP2-201ENST00000394154 CHRDL2Q6WN34 429 aa14.24□□□□□ -0.13
VTI1BP2-201ENST00000394154 ERO1AQ96HE7 468 aa14.24□□□□□ -0.13
VTI1BP2-201ENST00000394154 RRP7AQ9Y3A4 280 aaKnown RBP14.24□□□□□ -0.13
VTI1BP2-201ENST00000394154 ZNF609O15014 1411 aa14.24□□□□□ -0.13
VTI1BP2-201ENST00000394154 CEP290O15078 2479 aa14.23□□□□□ -0.13
VTI1BP2-201ENST00000394154 ZNF521Q96K83 1311 aa14.23□□□□□ -0.13
VTI1BP2-201ENST00000394154 RIMBP2O15034 1052 aa14.23□□□□□ -0.13
VTI1BP2-201ENST00000394154 ZNF280AP59817 542 aaPredicted RBP14.23□□□□□ -0.13
VTI1BP2-201ENST00000394154 TCIRG1Q13488 830 aa14.23□□□□□ -0.13
VTI1BP2-201ENST00000394154 NFE2L2Q16236 605 aa14.23□□□□□ -0.13
VTI1BP2-201ENST00000394154 WWC1Q8IX03 1113 aa14.23□□□□□ -0.13
VTI1BP2-201ENST00000394154 NECTIN2Q92692 538 aa14.23□□□□□ -0.13
VTI1BP2-201ENST00000394154 KCNQ5Q9NR82 932 aa14.23□□□□□ -0.13
VTI1BP2-201ENST00000394154 C6orf229H3BNL8 230 aa14.22□□□□□ -0.13
VTI1BP2-201ENST00000394154 MYL6BP14649 208 aa14.22□□□□□ -0.13
VTI1BP2-201ENST00000394154 NF2P35240 595 aa14.22□□□□□ -0.13
VTI1BP2-201ENST00000394154 RIPK4P57078 832 aa14.22□□□□□ -0.13
VTI1BP2-201ENST00000394154 MCM10Q7L590 875 aa14.22□□□□□ -0.13
VTI1BP2-201ENST00000394154 WDR63Q8IWG1 891 aa14.22□□□□□ -0.13
VTI1BP2-201ENST00000394154 PHACTR3Q96KR7 559 aa14.22□□□□□ -0.13
VTI1BP2-201ENST00000394154 EYA3Q99504 573 aa14.22□□□□□ -0.13
VTI1BP2-201ENST00000394154 RBM27Q9P2N5 1060 aaKnown RBP14.22□□□□□ -0.13
VTI1BP2-201ENST00000394154 NSFL1CQ9UNZ2 370 aaKnown RBP14.22□□□□□ -0.13
VTI1BP2-201ENST00000394154 TAF1P21675 1872 aa14.22□□□□□ -0.13
VTI1BP2-201ENST00000394154 SCN9AQ15858 1988 aa14.22□□□□□ -0.13
VTI1BP2-201ENST00000394154 DOK7Q18PE1 504 aa14.21□□□□□ -0.13
VTI1BP2-201ENST00000394154 RANBP2P49792 3224 aaKnown RBP14.2□□□□□ -0.14
VTI1BP2-201ENST00000394154 KDM3BQ7LBC6 1761 aa14.2□□□□□ -0.14
VTI1BP2-201ENST00000394154 HCLS1P14317 486 aaPredicted RBP14.2□□□□□ -0.14
VTI1BP2-201ENST00000394154 INHBEP58166 350 aa14.2□□□□□ -0.14
VTI1BP2-201ENST00000394154 LMOD3Q0VAK6 560 aa14.2□□□□□ -0.14
VTI1BP2-201ENST00000394154 AGBL3Q8NEM8 1001 aa14.2□□□□□ -0.14
VTI1BP2-201ENST00000394154 CDCA7LQ96GN5 454 aa14.2□□□□□ -0.14
VTI1BP2-201ENST00000394154 ZNF333Q96JL9 665 aa14.2□□□□□ -0.14
VTI1BP2-201ENST00000394154 EFCC1Q9HA90 598 aa14.2□□□□□ -0.14
VTI1BP2-201ENST00000394154 POLLQ9UGP5 575 aa14.2□□□□□ -0.14
VTI1BP2-201ENST00000394154 MANSC4A6NHS7 340 aaPredicted RBP14.19□□□□□ -0.14
VTI1BP2-201ENST00000394154 E9PSI1 815 aa14.19□□□□□ -0.14
VTI1BP2-201ENST00000394154 SLFN5Q08AF3 891 aa14.19□□□□□ -0.14
VTI1BP2-201ENST00000394154 TAF7Q15545 349 aaPredicted RBP14.19□□□□□ -0.14
VTI1BP2-201ENST00000394154 SPRYD7Q5W111 196 aa14.19□□□□□ -0.14
VTI1BP2-201ENST00000394154 ARMC9Q7Z3E5 817 aa14.19□□□□□ -0.14
VTI1BP2-201ENST00000394154 NBPF11Q86T75 865 aa14.19□□□□□ -0.14
VTI1BP2-201ENST00000394154 IFNL1Q8IU54 200 aa14.19□□□□□ -0.14
VTI1BP2-201ENST00000394154 CD99L2Q8TCZ2 262 aa14.19□□□□□ -0.14
VTI1BP2-201ENST00000394154 MYOZ2Q9NPC6 264 aa14.19□□□□□ -0.14
VTI1BP2-201ENST00000394154 DLG5Q8TDM6 1919 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms