RNA–Protein interactions for RNA: ENST00000394089.6

RARA-204, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RARA, Length 2,024 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-204ENST00000394089 ZNF772Q68DY9 489 aaPredicted RBP27.86■■■□□ 2.05
RARA-204ENST00000394089 IL25Q9H293 177 aa27.86■■■□□ 2.05
RARA-204ENST00000394089 RIPOR2Q9Y4F9 1068 aa27.86■■■□□ 2.05
RARA-204ENST00000394089 LAMB2P55268 1798 aa27.86■■■□□ 2.05
RARA-204ENST00000394089 GNPATO15228 680 aa27.85■■■□□ 2.05
RARA-204ENST00000394089 NEUROD6Q96NK8 337 aa27.85■■■□□ 2.05
RARA-204ENST00000394089 MCCP23508 829 aa27.85■■■□□ 2.05
RARA-204ENST00000394089 TIMM10P62072 90 aa27.85■■■□□ 2.05
RARA-204ENST00000394089 HAUS7Q99871 368 aa27.85■■■□□ 2.05
RARA-204ENST00000394089 RTCBQ9Y3I0 505 aaKnown RBP27.85■■■□□ 2.05
RARA-204ENST00000394089 BRWD3Q6RI45 1802 aa27.84■■■□□ 2.05
RARA-204ENST00000394089 A0A1B0GUL7 405 aa27.84■■■□□ 2.05
RARA-204ENST00000394089 HCLS1P14317 486 aaPredicted RBP27.84■■■□□ 2.05
RARA-204ENST00000394089 LDHAL6AQ6ZMR3 332 aa27.84■■■□□ 2.05
RARA-204ENST00000394089 DDX60Q8IY21 1712 aaKnown RBP27.84■■■□□ 2.05
RARA-204ENST00000394089 FAM177BA6PVY3 158 aa27.84■■■□□ 2.05
RARA-204ENST00000394089 BCL2L12Q9HB09 334 aa27.84■■■□□ 2.05
RARA-204ENST00000394089 LRP5O75197 1615 aa27.83■■■□□ 2.05
RARA-204ENST00000394089 RTL9Q8NET4 1388 aa27.83■■■□□ 2.05
RARA-204ENST00000394089 C4BP0C0L5 1744 aa27.83■■■□□ 2.05
RARA-204ENST00000394089 RIC1Q4ADV7 1423 aa27.83■■■□□ 2.05
RARA-204ENST00000394089 CWC27Q6UX04 472 aaKnown RBP27.83■■■□□ 2.05
RARA-204ENST00000394089 PRDM4Q9UKN5 801 aa27.83■■■□□ 2.05
RARA-204ENST00000394089 RBM6P78332 1123 aaKnown RBP27.82■■■□□ 2.04
RARA-204ENST00000394089 IL17RAQ96F46 866 aa27.82■■■□□ 2.04
RARA-204ENST00000394089 RFX7Q2KHR2 1363 aa27.82■■■□□ 2.04
RARA-204ENST00000394089 ANAPC15P60006 121 aa27.82■■■□□ 2.04
RARA-204ENST00000394089 FSD1Q9BTV5 496 aa27.82■■■□□ 2.04
RARA-204ENST00000394089 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.81■■■□□ 2.04
RARA-204ENST00000394089 CCDC152Q4G0S7 254 aa27.8■■■□□ 2.04
RARA-204ENST00000394089 USPL1Q5W0Q7 1092 aa27.8■■■□□ 2.04
RARA-204ENST00000394089 CNNM1Q9NRU3 951 aa27.8■■■□□ 2.04
RARA-204ENST00000394089 ZPR1O75312 459 aa27.8■■■□□ 2.04
RARA-204ENST00000394089 NASPP49321 788 aaPredicted RBP27.8■■■□□ 2.04
RARA-204ENST00000394089 METTL24Q5JXM2 366 aa27.8■■■□□ 2.04
RARA-204ENST00000394089 LSG1Q9H089 658 aaKnown RBP27.8■■■□□ 2.04
RARA-204ENST00000394089 SNRKQ9NRH2 765 aa27.8■■■□□ 2.04
RARA-204ENST00000394089 RAD50Q92878 1312 aa27.8■■■□□ 2.04
RARA-204ENST00000394089 TICAM2Q86XR7 235 aa27.79■■■□□ 2.04
RARA-204ENST00000394089 KLHL40Q2TBA0 621 aa27.79■■■□□ 2.04
RARA-204ENST00000394089 TBC1D9BQ66K14 1250 aa27.79■■■□□ 2.04
RARA-204ENST00000394089 SMIM5Q71RC9 77 aa27.79■■■□□ 2.04
RARA-204ENST00000394089 FBXO41Q8TF61 875 aa27.78■■■□□ 2.04
RARA-204ENST00000394089 ARHGEF1Q92888 912 aaKnown RBP27.78■■■□□ 2.04
RARA-204ENST00000394089 LRRC4BQ9NT99 713 aa27.78■■■□□ 2.04
RARA-204ENST00000394089 SRP68Q9UHB9 627 aaKnown RBP27.78■■■□□ 2.04
RARA-204ENST00000394089 ZNF500O60304 480 aaPredicted RBP27.77■■■□□ 2.04
RARA-204ENST00000394089 HSPA4P34932 840 aa27.77■■■□□ 2.04
RARA-204ENST00000394089 SLC27A3Q5K4L6 730 aa27.77■■■□□ 2.04
RARA-204ENST00000394089 VGLL2Q8N8G2 317 aa27.77■■■□□ 2.04
RARA-204ENST00000394089 NMIQ13287 307 aaPredicted RBP27.77■■■□□ 2.04
RARA-204ENST00000394089 XAGE2Q96GT9 111 aa27.77■■■□□ 2.04
RARA-204ENST00000394089 MROH5Q6ZUA9 1318 aa27.76■■■□□ 2.03
RARA-204ENST00000394089 ZNF445P59923 1031 aa27.76■■■□□ 2.03
RARA-204ENST00000394089 MTERF4Q7Z6M4 381 aaKnown RBP27.76■■■□□ 2.03
RARA-204ENST00000394089 AMIGO3Q86WK7 504 aa27.76■■■□□ 2.03
RARA-204ENST00000394089 EDC3Q96F86 508 aaKnown RBP27.76■■■□□ 2.03
RARA-204ENST00000394089 DNAJC2Q99543 621 aaKnown RBP27.76■■■□□ 2.03
RARA-204ENST00000394089 ABCC12Q96J65 1359 aa27.76■■■□□ 2.03
RARA-204ENST00000394089 COL24A1Q17RW2 1714 aa27.76■■■□□ 2.03
RARA-204ENST00000394089 CD2BP2O95400 341 aaKnown RBP27.75■■■□□ 2.03
RARA-204ENST00000394089 ATP2B3Q16720 1220 aa27.75■■■□□ 2.03
RARA-204ENST00000394089 CCDC158Q5M9N0 1113 aa27.75■■■□□ 2.03
RARA-204ENST00000394089 SLC10A5Q5PT55 438 aa27.75■■■□□ 2.03
RARA-204ENST00000394089 TRAPPC3LQ5T215 181 aa27.75■■■□□ 2.03
RARA-204ENST00000394089 ANP32BQ92688 251 aaKnown RBP27.75■■■□□ 2.03
RARA-204ENST00000394089 NYXQ9GZU5 481 aa27.75■■■□□ 2.03
RARA-204ENST00000394089 ADRA2BP18089 450 aa27.75■■■□□ 2.03
RARA-204ENST00000394089 ERFEQ4G0M1 354 aa27.75■■■□□ 2.03
RARA-204ENST00000394089 SETDB2Q96T68 719 aa27.75■■■□□ 2.03
RARA-204ENST00000394089 K7ELQ4 463 aaPredicted RBP27.74■■■□□ 2.03
RARA-204ENST00000394089 PDE8BO95263 885 aa27.74■■■□□ 2.03
RARA-204ENST00000394089 IFIT1P09914 478 aaKnown RBP27.74■■■□□ 2.03
RARA-204ENST00000394089 MSNP26038 577 aaKnown RBP27.74■■■□□ 2.03
RARA-204ENST00000394089 FAM227BQ96M60 508 aa27.74■■■□□ 2.03
RARA-204ENST00000394089 PALD1Q9ULE6 856 aa27.74■■■□□ 2.03
RARA-204ENST00000394089 SPEF2Q9C093 1822 aa27.74■■■□□ 2.03
RARA-204ENST00000394089 TRIM37O94972 964 aa27.74■■■□□ 2.03
RARA-204ENST00000394089 ADORA1P30542 326 aa27.74■■■□□ 2.03
RARA-204ENST00000394089 KBTBD3Q8NAB2 608 aa27.74■■■□□ 2.03
RARA-204ENST00000394089 SF3B3Q15393 1217 aaKnown RBP27.73■■■□□ 2.03
RARA-204ENST00000394089 GORABQ5T7V8 394 aa27.73■■■□□ 2.03
RARA-204ENST00000394089 BICDL1Q6ZP65 573 aa27.73■■■□□ 2.03
RARA-204ENST00000394089 SEC31BQ9NQW1 1179 aa27.73■■■□□ 2.03
RARA-204ENST00000394089 PAG1Q9NWQ8 432 aa27.73■■■□□ 2.03
RARA-204ENST00000394089 C4AP0C0L4 1744 aa27.73■■■□□ 2.03
RARA-204ENST00000394089 ST18O60284 1047 aa27.72■■■□□ 2.03
RARA-204ENST00000394089 RFC4P35249 363 aa27.72■■■□□ 2.03
RARA-204ENST00000394089 PDLIM2Q96JY6 352 aa27.72■■■□□ 2.03
RARA-204ENST00000394089 NDUFB9Q9Y6M9 179 aa27.72■■■□□ 2.03
RARA-204ENST00000394089 GOLGA6L22H0YM25 854 aa27.72■■■□□ 2.03
RARA-204ENST00000394089 TTC39AQ5SRH9 613 aa27.72■■■□□ 2.03
RARA-204ENST00000394089 MPHOSPH8Q99549 860 aa27.72■■■□□ 2.03
RARA-204ENST00000394089 NOL7Q9UMY1 257 aaKnown RBP27.72■■■□□ 2.03
RARA-204ENST00000394089 MED23Q9ULK4 1368 aa27.71■■■□□ 2.03
RARA-204ENST00000394089 A0A0D9SFI3 127 aa27.71■■■□□ 2.03
RARA-204ENST00000394089 HMGB2P26583 209 aaKnown RBP27.71■■■□□ 2.03
RARA-204ENST00000394089 IGHMBP2P38935 993 aaKnown RBP27.7■■■□□ 2.03
RARA-204ENST00000394089 DDX46Q7L014 1031 aaKnown RBP27.7■■■□□ 2.03
RARA-204ENST00000394089 CCDC171Q6TFL3 1326 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms