RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 SCRN1Q12765 414 aa16.47■□□□□ 0.23
GAPVD1-205ENST00000394084 RESTQ13127 1097 aa16.47■□□□□ 0.23
GAPVD1-205ENST00000394084 CHRNA2Q15822 529 aa16.47■□□□□ 0.23
GAPVD1-205ENST00000394084 IFNL2Q8IZJ0 200 aa16.47■□□□□ 0.23
GAPVD1-205ENST00000394084 DNAJC25Q9H1X3 360 aa16.47■□□□□ 0.23
GAPVD1-205ENST00000394084 DDX19AQ9NUU7 478 aaKnown RBP16.47■□□□□ 0.23
GAPVD1-205ENST00000394084 GOLIM4O00461 696 aa16.46■□□□□ 0.23
GAPVD1-205ENST00000394084 HAUS7Q99871 368 aa16.46■□□□□ 0.23
GAPVD1-205ENST00000394084 TRIM5Q9C035 493 aa16.46■□□□□ 0.23
GAPVD1-205ENST00000394084 FTOQ9C0B1 505 aaKnown RBP eCLIP16.46■□□□□ 0.23
GAPVD1-205ENST00000394084 A0A0G2JLW4 131 aa16.46■□□□□ 0.22
GAPVD1-205ENST00000394084 HMGN5P82970 282 aaKnown RBP16.46■□□□□ 0.22
GAPVD1-205ENST00000394084 CCDC186Q7Z3E2 898 aa16.46■□□□□ 0.22
GAPVD1-205ENST00000394084 NRBP1Q9UHY1 535 aa16.46■□□□□ 0.22
GAPVD1-205ENST00000394084 MEGF6O75095 1541 aa16.45■□□□□ 0.22
GAPVD1-205ENST00000394084 MRC1P22897 1456 aa16.45■□□□□ 0.22
GAPVD1-205ENST00000394084 CCT2P78371 535 aaKnown RBP16.45■□□□□ 0.22
GAPVD1-205ENST00000394084 FMNL2Q96PY5 1086 aa16.45■□□□□ 0.22
GAPVD1-205ENST00000394084 CYP27B1O15528 508 aa16.45■□□□□ 0.22
GAPVD1-205ENST00000394084 TIMM10P62072 90 aa16.45■□□□□ 0.22
GAPVD1-205ENST00000394084 APOBRQ0VD83 1088 aa16.45■□□□□ 0.22
GAPVD1-205ENST00000394084 LRMPQ12912 555 aa16.45■□□□□ 0.22
GAPVD1-205ENST00000394084 RABL6Q3YEC7 729 aaPredicted RBP16.45■□□□□ 0.22
GAPVD1-205ENST00000394084 TPM3P06753 285 aa16.44■□□□□ 0.22
GAPVD1-205ENST00000394084 ZNF165P49910 485 aa16.44■□□□□ 0.22
GAPVD1-205ENST00000394084 CHST3Q7LGC8 479 aa16.44■□□□□ 0.22
GAPVD1-205ENST00000394084 CABP4P57796 275 aa16.44■□□□□ 0.22
GAPVD1-205ENST00000394084 ZNF710Q8N1W2 664 aa16.44■□□□□ 0.22
GAPVD1-205ENST00000394084 KBTBD3Q8NAB2 608 aa16.44■□□□□ 0.22
GAPVD1-205ENST00000394084 GUCY1B3Q02153 619 aa16.43■□□□□ 0.22
GAPVD1-205ENST00000394084 NCOA5Q9HCD5 579 aaKnown RBP16.43■□□□□ 0.22
GAPVD1-205ENST00000394084 KLHL34Q8N239 644 aa16.43■□□□□ 0.22
GAPVD1-205ENST00000394084 KIF3AQ9Y496 699 aa16.43■□□□□ 0.22
GAPVD1-205ENST00000394084 MTERF4Q7Z6M4 381 aaKnown RBP16.42■□□□□ 0.22
GAPVD1-205ENST00000394084 CAMTA1Q9Y6Y1 1673 aa16.42■□□□□ 0.22
GAPVD1-205ENST00000394084 A0A087WWV3 80 aa16.42■□□□□ 0.22
GAPVD1-205ENST00000394084 ZNF594Q96JF6 807 aaPredicted RBP16.42■□□□□ 0.22
GAPVD1-205ENST00000394084 DCAF5Q96JK2 942 aa16.42■□□□□ 0.22
GAPVD1-205ENST00000394084 PAG1Q9NWQ8 432 aa16.42■□□□□ 0.22
GAPVD1-205ENST00000394084 ADAMTS7Q9UKP4 1686 aa16.42■□□□□ 0.22
GAPVD1-205ENST00000394084 PTPDC1A2A3K4 754 aa16.42■□□□□ 0.22
GAPVD1-205ENST00000394084 ZNF75DP51815 510 aa16.42■□□□□ 0.22
GAPVD1-205ENST00000394084 CASP7P55210 303 aa16.42■□□□□ 0.22
GAPVD1-205ENST00000394084 NSUN7Q8NE18 718 aaKnown RBP16.42■□□□□ 0.22
GAPVD1-205ENST00000394084 RIOK3O14730 519 aaKnown RBP16.41■□□□□ 0.22
GAPVD1-205ENST00000394084 RBM43Q6ZSC3 357 aaKnown RBP16.41■□□□□ 0.22
GAPVD1-205ENST00000394084 TTLL7Q6ZT98 887 aa16.41■□□□□ 0.22
GAPVD1-205ENST00000394084 DHX32Q7L7V1 743 aaKnown RBP16.41■□□□□ 0.22
GAPVD1-205ENST00000394084 PLBD2Q8NHP8 589 aa16.41■□□□□ 0.22
GAPVD1-205ENST00000394084 SCN11AQ9UI33 1791 aa16.41■□□□□ 0.22
GAPVD1-205ENST00000394084 AFDNP55196 1824 aaKnown RBP16.41■□□□□ 0.22
GAPVD1-205ENST00000394084 CTDNEP1O95476 244 aa16.41■□□□□ 0.22
GAPVD1-205ENST00000394084 CHAF1AQ13111 956 aaPredicted RBP16.41■□□□□ 0.22
GAPVD1-205ENST00000394084 ZSCAN16Q9H4T2 348 aaPredicted RBP16.41■□□□□ 0.22
GAPVD1-205ENST00000394084 CFAP45Q9UL16 551 aa16.41■□□□□ 0.22
GAPVD1-205ENST00000394084 PFKFB2O60825 505 aa16.4■□□□□ 0.22
GAPVD1-205ENST00000394084 FOXO4P98177 505 aa16.4■□□□□ 0.22
GAPVD1-205ENST00000394084 C1orf167Q5SNV9 1468 aa16.4■□□□□ 0.22
GAPVD1-205ENST00000394084 LRRC24Q50LG9 513 aa16.4■□□□□ 0.22
GAPVD1-205ENST00000394084 ATG9AQ7Z3C6 839 aa16.4■□□□□ 0.22
GAPVD1-205ENST00000394084 CCAR1Q8IX12 1150 aaKnown RBP16.4■□□□□ 0.22
GAPVD1-205ENST00000394084 TDRD7Q8NHU6 1098 aaKnown RBP16.4■□□□□ 0.22
GAPVD1-205ENST00000394084 SMARCC2Q8TAQ2 1214 aa16.4■□□□□ 0.22
GAPVD1-205ENST00000394084 FBXW7Q969H0 707 aa16.4■□□□□ 0.22
GAPVD1-205ENST00000394084 BCL2L12Q9HB09 334 aa16.4■□□□□ 0.22
GAPVD1-205ENST00000394084 TRPM3Q9HCF6 1732 aaPredicted RBP16.4■□□□□ 0.22
GAPVD1-205ENST00000394084 NBPF26B4DH59 902 aa16.4■□□□□ 0.22
GAPVD1-205ENST00000394084 NBPF14Q5TI25 921 aa16.4■□□□□ 0.22
GAPVD1-205ENST00000394084 NBPF10Q6P3W6 841 aaKnown RBP16.4■□□□□ 0.22
GAPVD1-205ENST00000394084 NBPF15Q8N660 670 aa16.4■□□□□ 0.22
GAPVD1-205ENST00000394084 ZBTB3Q9H5J0 574 aa16.4■□□□□ 0.22
GAPVD1-205ENST00000394084 GTF2F1P35269 517 aaKnown RBP eCLIP16.39■□□□□ 0.215e-6■■■■□ 24.4
GAPVD1-205ENST00000394084 TTLL5Q6EMB2 1281 aa16.39■□□□□ 0.21
GAPVD1-205ENST00000394084 SH3TC1Q8TE82 1336 aa16.39■□□□□ 0.21
GAPVD1-205ENST00000394084 ADD1P35611 737 aaKnown RBP16.39■□□□□ 0.21
GAPVD1-205ENST00000394084 C11orf57Q6ZUT1 292 aaPredicted RBP16.39■□□□□ 0.21
GAPVD1-205ENST00000394084 PLA2G4DQ86XP0 818 aa16.39■□□□□ 0.21
GAPVD1-205ENST00000394084 ERCC4Q92889 916 aaPredicted RBP16.39■□□□□ 0.21
GAPVD1-205ENST00000394084 C16orf45Q96MC5 204 aaPredicted RBP16.39■□□□□ 0.21
GAPVD1-205ENST00000394084 USP28Q96RU2 1077 aa16.39■□□□□ 0.21
GAPVD1-205ENST00000394084 GOLPH3LQ9H4A5 285 aa16.39■□□□□ 0.21
GAPVD1-205ENST00000394084 CLIP2Q9UDT6 1046 aa16.39■□□□□ 0.21
GAPVD1-205ENST00000394084 RFX7Q2KHR2 1363 aa16.38■□□□□ 0.21
GAPVD1-205ENST00000394084 E7EWF7 191 aa16.38■□□□□ 0.21
GAPVD1-205ENST00000394084 ZSCAN25Q6NSZ9 544 aa16.38■□□□□ 0.21
GAPVD1-205ENST00000394084 A1BGP04217 495 aa16.38■□□□□ 0.21
GAPVD1-205ENST00000394084 IFIT1P09914 478 aaKnown RBP16.38■□□□□ 0.21
GAPVD1-205ENST00000394084 HSPD1P10809 573 aaKnown RBP16.38■□□□□ 0.21
GAPVD1-205ENST00000394084 PRDM10Q9NQV6 1147 aa16.38■□□□□ 0.21
GAPVD1-205ENST00000394084 GPHNQ9NQX3 736 aaPredicted RBP16.38■□□□□ 0.21
GAPVD1-205ENST00000394084 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.38■□□□□ 0.213e-7■■□□□ 12.5
GAPVD1-205ENST00000394084 GOLGA6L19H0YKK7 550 aa16.37■□□□□ 0.21
GAPVD1-205ENST00000394084 H7C1W4 665 aa16.37■□□□□ 0.21
GAPVD1-205ENST00000394084 HMGB1P09429 215 aaKnown RBP16.37■□□□□ 0.21
GAPVD1-205ENST00000394084 CCDC144BQ3MJ40 725 aa16.37■□□□□ 0.21
GAPVD1-205ENST00000394084 CCDC144CPQ8IYA2 1237 aa16.37■□□□□ 0.21
GAPVD1-205ENST00000394084 LLPHQ9BRT6 129 aaKnown RBP16.37■□□□□ 0.21
GAPVD1-205ENST00000394084 PUS3Q9BZE2 481 aaKnown RBP16.37■□□□□ 0.21
GAPVD1-205ENST00000394084 C19orf44Q9H6X5 657 aa16.37■□□□□ 0.21
GAPVD1-205ENST00000394084 HELLSQ9NRZ9 838 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms