RNA–Protein interactions for RNA: ENST00000393820.2

NPM1-203, Transcript of nucleophosmin 1, humanhuman

TSL 1 (best) BASIC

Gene NPM1, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-203ENST00000393820 UPP2O95045 317 aa7.41□□□□□ -1.22
NPM1-203ENST00000393820 GPR161Q8N6U8 529 aaKnown RBP7.41□□□□□ -1.22
NPM1-203ENST00000393820 L3MBTL2Q969R5 705 aa7.41□□□□□ -1.22
NPM1-203ENST00000393820 ASB16Q96NS5 453 aa7.41□□□□□ -1.22
NPM1-203ENST00000393820 TBX22Q9Y458 520 aa7.41□□□□□ -1.22
NPM1-203ENST00000393820 ADGRB3O60242 1522 aa7.4□□□□□ -1.22
NPM1-203ENST00000393820 ANKRD50Q9ULJ7 1429 aa7.4□□□□□ -1.22
NPM1-203ENST00000393820 PIK3R4Q99570 1358 aa7.4□□□□□ -1.22
NPM1-203ENST00000393820 PLEKHG1Q9ULL1 1385 aa7.4□□□□□ -1.22
NPM1-203ENST00000393820 ARHGAP4P98171 946 aa7.4□□□□□ -1.22
NPM1-203ENST00000393820 USP4Q13107 963 aa7.4□□□□□ -1.22
NPM1-203ENST00000393820 ZNF326Q5BKZ1 582 aaKnown RBP7.4□□□□□ -1.22
NPM1-203ENST00000393820 KDF1Q8NAX2 398 aaPredicted RBP7.4□□□□□ -1.22
NPM1-203ENST00000393820 GTF3C2Q8WUA4 911 aaPredicted RBP7.4□□□□□ -1.22
NPM1-203ENST00000393820 MRS2Q9HD23 443 aa7.4□□□□□ -1.22
NPM1-203ENST00000393820 SEPT3Q9UH03 358 aa7.4□□□□□ -1.22
NPM1-203ENST00000393820 NWD1Q149M9 1564 aa7.39□□□□□ -1.23
NPM1-203ENST00000393820 BMP2P12643 396 aa7.39□□□□□ -1.23
NPM1-203ENST00000393820 WEE1P30291 646 aa7.39□□□□□ -1.23
NPM1-203ENST00000393820 PSME1Q06323 249 aa7.39□□□□□ -1.23
NPM1-203ENST00000393820 SLC26A8Q96RN1 970 aa7.39□□□□□ -1.23
NPM1-203ENST00000393820 COL25A1Q9BXS0 654 aaPredicted RBP7.39□□□□□ -1.23
NPM1-203ENST00000393820 ZNF395Q9H8N7 513 aaPredicted RBP7.39□□□□□ -1.23
NPM1-203ENST00000393820 RAB6BQ9NRW1 208 aa7.39□□□□□ -1.23
NPM1-203ENST00000393820 DCTN4Q9UJW0 460 aa7.39□□□□□ -1.23
NPM1-203ENST00000393820 SPATA31E1Q6ZUB1 1445 aa7.39□□□□□ -1.23
NPM1-203ENST00000393820 ANKRD30BQ9BXX2 1392 aa7.39□□□□□ -1.23
NPM1-203ENST00000393820 XIRP1Q702N8 1843 aaKnown RBP7.39□□□□□ -1.23
NPM1-203ENST00000393820 RNF123Q5XPI4 1314 aa7.38□□□□□ -1.23
NPM1-203ENST00000393820 LGR5O75473 907 aa7.38□□□□□ -1.23
NPM1-203ENST00000393820 MYCP01106 439 aaPredicted RBP7.38□□□□□ -1.23
NPM1-203ENST00000393820 MAPK1P28482 360 aa7.38□□□□□ -1.23
NPM1-203ENST00000393820 RELBQ01201 579 aa7.38□□□□□ -1.23
NPM1-203ENST00000393820 TAGLNQ01995 201 aaKnown RBP7.38□□□□□ -1.23
NPM1-203ENST00000393820 FKBP5Q13451 457 aaPredicted RBP7.38□□□□□ -1.23
NPM1-203ENST00000393820 SCARF2Q96GP6 870 aaPredicted RBP7.38□□□□□ -1.23
NPM1-203ENST00000393820 KRTAP4-8Q9BYQ9 185 aa7.38□□□□□ -1.23
NPM1-203ENST00000393820 GCC2Q8IWJ2 1684 aa7.38□□□□□ -1.23
NPM1-203ENST00000393820 ZFYVE9O95405 1425 aa7.38□□□□□ -1.23
NPM1-203ENST00000393820 SMG6Q86US8 1419 aaKnown RBP7.38□□□□□ -1.23
NPM1-203ENST00000393820 RECKO95980 971 aa7.37□□□□□ -1.23
NPM1-203ENST00000393820 IRX6P78412 446 aaPredicted RBP7.37□□□□□ -1.23
NPM1-203ENST00000393820 CAPN12Q6ZSI9 719 aa7.37□□□□□ -1.23
NPM1-203ENST00000393820 Q6ZVU0 165 aa7.37□□□□□ -1.23
NPM1-203ENST00000393820 MKNK1Q9BUB5 465 aa7.37□□□□□ -1.23
NPM1-203ENST00000393820 RGS17Q9UGC6 210 aaPredicted RBP7.37□□□□□ -1.23
NPM1-203ENST00000393820 JCADQ9P266 1359 aa7.37□□□□□ -1.23
NPM1-203ENST00000393820 M0R2N6 131 aa7.37□□□□□ -1.23
NPM1-203ENST00000393820 ADAM23O75077 832 aa7.37□□□□□ -1.23
NPM1-203ENST00000393820 ARHGEF15O94989 841 aa7.37□□□□□ -1.23
NPM1-203ENST00000393820 SF3B2Q13435 895 aaKnown RBP7.37□□□□□ -1.23
NPM1-203ENST00000393820 MTMR3Q13615 1198 aa7.37□□□□□ -1.23
NPM1-203ENST00000393820 CCDC184Q52MB2 194 aa7.37□□□□□ -1.23
NPM1-203ENST00000393820 FAM9BQ8IZU0 186 aa7.37□□□□□ -1.23
NPM1-203ENST00000393820 TSEN2Q8NCE0 465 aaKnown RBP7.37□□□□□ -1.23
NPM1-203ENST00000393820 C8orf37Q96NL8 207 aa7.37□□□□□ -1.23
NPM1-203ENST00000393820 C19orf44Q9H6X5 657 aa7.37□□□□□ -1.23
NPM1-203ENST00000393820 RIMS2Q9UQ26 1411 aa7.37□□□□□ -1.23
NPM1-203ENST00000393820 DIP2AQ14689 1571 aa7.37□□□□□ -1.23
NPM1-203ENST00000393820 SPATA31A6Q5VVP1 1343 aa7.36□□□□□ -1.23
NPM1-203ENST00000393820 ADH1AP07327 375 aa7.36□□□□□ -1.23
NPM1-203ENST00000393820 FKBP4Q02790 459 aaKnown RBP eCLIP7.36□□□□□ -1.233e-6■■□□□ 11.6
NPM1-203ENST00000393820 COL19A1Q14993 1142 aa7.36□□□□□ -1.23
NPM1-203ENST00000393820 CCDC125Q86Z20 511 aa7.36□□□□□ -1.23
NPM1-203ENST00000393820 MEIOBQ8N635 442 aa7.36□□□□□ -1.23
NPM1-203ENST00000393820 HINFPQ9BQA5 517 aa7.36□□□□□ -1.23
NPM1-203ENST00000393820 ARHGEF10LQ9HCE6 1279 aa7.36□□□□□ -1.23
NPM1-203ENST00000393820 DNMT3LQ9UJW3 386 aa7.36□□□□□ -1.23
NPM1-203ENST00000393820 ROBO1Q9Y6N7 1651 aa7.36□□□□□ -1.23
NPM1-203ENST00000393820 SOS2Q07890 1332 aaPredicted RBP7.35□□□□□ -1.23
NPM1-203ENST00000393820 KIF7Q2M1P5 1343 aa7.35□□□□□ -1.23
NPM1-203ENST00000393820 CHD2O14647 1828 aaKnown RBP7.35□□□□□ -1.23
NPM1-203ENST00000393820 SLURP2P0DP57 97 aa7.35□□□□□ -1.23
NPM1-203ENST00000393820 ATF3P18847 181 aa7.35□□□□□ -1.23
NPM1-203ENST00000393820 RGL4Q8IZJ4 473 aa7.35□□□□□ -1.23
NPM1-203ENST00000393820 LINC00528Q8N1L1 170 aa7.35□□□□□ -1.23
NPM1-203ENST00000393820 NANOS1Q8WY41 292 aaKnown RBP7.35□□□□□ -1.23
NPM1-203ENST00000393820 NUDCQ9Y266 331 aa7.35□□□□□ -1.23
NPM1-203ENST00000393820 NOP58Q9Y2X3 529 aaKnown RBP7.35□□□□□ -1.23
NPM1-203ENST00000393820 TMEM131LA2VDJ0 1609 aa7.35□□□□□ -1.23
NPM1-203ENST00000393820 DCCP43146 1447 aa7.34□□□□□ -1.23
NPM1-203ENST00000393820 MSTNO14793 375 aa7.34□□□□□ -1.23
NPM1-203ENST00000393820 PTCD1O75127 700 aaKnown RBP7.34□□□□□ -1.23
NPM1-203ENST00000393820 SCNN1DP51172 638 aa7.34□□□□□ -1.23
NPM1-203ENST00000393820 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.34□□□□□ -1.231e-8■□□□□ 9.8
NPM1-203ENST00000393820 NBPF8Q3BBV2 869 aa7.34□□□□□ -1.23
NPM1-203ENST00000393820 ZNF772Q68DY9 489 aaPredicted RBP7.34□□□□□ -1.23
NPM1-203ENST00000393820 ZSCAN29Q8IWY8 852 aaPredicted RBP7.34□□□□□ -1.23
NPM1-203ENST00000393820 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.34□□□□□ -1.23
NPM1-203ENST00000393820 COL26A1Q96A83 441 aa7.34□□□□□ -1.23
NPM1-203ENST00000393820 ETNK1Q9HBU6 452 aa7.34□□□□□ -1.23
NPM1-203ENST00000393820 UNC13BO14795 1591 aa7.34□□□□□ -1.23
NPM1-203ENST00000393820 A0A1W2PRU2 124 aa7.33□□□□□ -1.24
NPM1-203ENST00000393820 TMEM229AB2RXF0 380 aa7.33□□□□□ -1.24
NPM1-203ENST00000393820 PTGIRP43119 386 aa7.33□□□□□ -1.24
NPM1-203ENST00000393820 HELQQ8TDG4 1101 aa7.33□□□□□ -1.24
NPM1-203ENST00000393820 WHAMMQ8TF30 809 aa7.33□□□□□ -1.24
NPM1-203ENST00000393820 INSM2Q96T92 566 aaPredicted RBP7.33□□□□□ -1.24
NPM1-203ENST00000393820 SERTAD1Q9UHV2 236 aa7.33□□□□□ -1.24
NPM1-203ENST00000393820 ROCK2O75116 1388 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms