RNA–Protein interactions for RNA: ENST00000393780.3

GAP43-202, Transcript of growth associated protein 43, humanhuman

TSL 1 (best) BASIC

Gene GAP43, Length 1,901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43-202ENST00000393780 ZNF830Q96NB3 372 aaPredicted RBP16.59■□□□□ 0.25
GAP43-202ENST00000393780 TNMDQ9H2S6 317 aa16.59■□□□□ 0.25
GAP43-202ENST00000393780 CPDO75976 1380 aa16.59■□□□□ 0.25
GAP43-202ENST00000393780 GOLGA6L4A6NEF3 574 aa16.58■□□□□ 0.25
GAP43-202ENST00000393780 PFKFB2O60825 505 aa16.58■□□□□ 0.25
GAP43-202ENST00000393780 FOXO4P98177 505 aa16.58■□□□□ 0.25
GAP43-202ENST00000393780 FAM173BQ6P4H8 233 aa16.58■□□□□ 0.25
GAP43-202ENST00000393780 DSCC1Q9BVC3 393 aa16.58■□□□□ 0.25
GAP43-202ENST00000393780 GTF2F1P35269 517 aaKnown RBP eCLIP16.58■□□□□ 0.24
GAP43-202ENST00000393780 CABP4P57796 275 aa16.58■□□□□ 0.24
GAP43-202ENST00000393780 STK3Q13188 491 aa16.58■□□□□ 0.24
GAP43-202ENST00000393780 KIAA1524Q8TCG1 905 aa16.58■□□□□ 0.24
GAP43-202ENST00000393780 BRF1Q92994 677 aa16.58■□□□□ 0.24
GAP43-202ENST00000393780 DNAJC2Q99543 621 aaKnown RBP16.58■□□□□ 0.24
GAP43-202ENST00000393780 AGXT2Q9BYV1 514 aa16.58■□□□□ 0.24
GAP43-202ENST00000393780 DACT1Q9NYF0 836 aa16.58■□□□□ 0.24
GAP43-202ENST00000393780 JAK2O60674 1132 aa16.57■□□□□ 0.24
GAP43-202ENST00000393780 CAVIN2O95810 425 aa16.57■□□□□ 0.24
GAP43-202ENST00000393780 CSB-PGBD3P0DP91 1061 aa16.57■□□□□ 0.24
GAP43-202ENST00000393780 NAA16Q6N069 864 aaPredicted RBP16.57■□□□□ 0.24
GAP43-202ENST00000393780 CFAP45Q9UL16 551 aa16.57■□□□□ 0.24
GAP43-202ENST00000393780 ATP5J2-PTCD1G3V325 749 aa16.57■□□□□ 0.24
GAP43-202ENST00000393780 PTCD1O75127 700 aaKnown RBP16.57■□□□□ 0.24
GAP43-202ENST00000393780 LMBR1LQ6UX01 489 aa16.57■□□□□ 0.24
GAP43-202ENST00000393780 CCDC129Q6ZRS4 1044 aa16.57■□□□□ 0.24
GAP43-202ENST00000393780 DHX32Q7L7V1 743 aaKnown RBP16.57■□□□□ 0.24
GAP43-202ENST00000393780 ATG9AQ7Z3C6 839 aa16.57■□□□□ 0.24
GAP43-202ENST00000393780 JARID2Q92833 1246 aaPredicted RBP16.57■□□□□ 0.24
GAP43-202ENST00000393780 PGBD1Q96JS3 809 aa16.57■□□□□ 0.24
GAP43-202ENST00000393780 SEC62Q99442 399 aaKnown RBP16.57■□□□□ 0.24
GAP43-202ENST00000393780 TFIP11Q9UBB9 837 aaKnown RBP16.57■□□□□ 0.24
GAP43-202ENST00000393780 IL15P40933 162 aaPredicted RBP16.56■□□□□ 0.24
GAP43-202ENST00000393780 DNTTIP2Q5QJE6 756 aaKnown RBP16.56■□□□□ 0.24
GAP43-202ENST00000393780 ZMYM1Q5SVZ6 1142 aa16.56■□□□□ 0.24
GAP43-202ENST00000393780 ATL3Q6DD88 541 aa16.56■□□□□ 0.24
GAP43-202ENST00000393780 STOX1Q6ZVD7 989 aa16.56■□□□□ 0.24
GAP43-202ENST00000393780 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.56■□□□□ 0.24
GAP43-202ENST00000393780 TDRD7Q8NHU6 1098 aaKnown RBP16.56■□□□□ 0.24
GAP43-202ENST00000393780 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.56■□□□□ 0.24
GAP43-202ENST00000393780 CHMP4CQ96CF2 233 aa16.56■□□□□ 0.24
GAP43-202ENST00000393780 KCNF1Q9H3M0 494 aa16.56■□□□□ 0.24
GAP43-202ENST00000393780 ATG3Q9NT62 314 aa16.56■□□□□ 0.24
GAP43-202ENST00000393780 CIAO1O76071 339 aa16.55■□□□□ 0.24
GAP43-202ENST00000393780 HSP90B1P14625 803 aaKnown RBP16.55■□□□□ 0.24
GAP43-202ENST00000393780 ATF3P18847 181 aa16.55■□□□□ 0.24
GAP43-202ENST00000393780 RBM10P98175 930 aaKnown RBP16.55■□□□□ 0.24
GAP43-202ENST00000393780 EXOSC10Q01780 885 aaKnown RBP16.55■□□□□ 0.24
GAP43-202ENST00000393780 SCRN1Q12765 414 aa16.55■□□□□ 0.24
GAP43-202ENST00000393780 DDX46Q7L014 1031 aaKnown RBP16.55■□□□□ 0.24
GAP43-202ENST00000393780 CBX8Q9HC52 389 aa16.55■□□□□ 0.24
GAP43-202ENST00000393780 PAG1Q9NWQ8 432 aa16.55■□□□□ 0.24
GAP43-202ENST00000393780 KIF3AQ9Y496 699 aa16.55■□□□□ 0.24
GAP43-202ENST00000393780 H3BQV1 296 aa16.55■□□□□ 0.24
GAP43-202ENST00000393780 IFFO2Q5TF58 517 aa16.55■□□□□ 0.24
GAP43-202ENST00000393780 CWC25Q9NXE8 425 aaPredicted RBP16.55■□□□□ 0.24
GAP43-202ENST00000393780 KCPQ6ZWJ8 1503 aa16.54■□□□□ 0.24
GAP43-202ENST00000393780 NBPF26B4DH59 902 aa16.54■□□□□ 0.24
GAP43-202ENST00000393780 PIP4K2AP48426 406 aaPredicted RBP16.54■□□□□ 0.24
GAP43-202ENST00000393780 CAMK4Q16566 473 aa16.54■□□□□ 0.24
GAP43-202ENST00000393780 ANO6Q4KMQ2 910 aa16.54■□□□□ 0.24
GAP43-202ENST00000393780 NBPF14Q5TI25 921 aa16.54■□□□□ 0.24
GAP43-202ENST00000393780 NBPF10Q6P3W6 841 aaKnown RBP16.54■□□□□ 0.24
GAP43-202ENST00000393780 MPNDQ8N594 471 aa16.54■□□□□ 0.24
GAP43-202ENST00000393780 NBPF15Q8N660 670 aa16.54■□□□□ 0.24
GAP43-202ENST00000393780 NSUN7Q8NE18 718 aaKnown RBP16.54■□□□□ 0.24
GAP43-202ENST00000393780 FAM13BQ9NYF5 915 aa16.54■□□□□ 0.24
GAP43-202ENST00000393780 NDUFB9Q9Y6M9 179 aa16.54■□□□□ 0.24
GAP43-202ENST00000393780 STRCP1A6NGW2 1772 aa16.54■□□□□ 0.24
GAP43-202ENST00000393780 TRHP20396 242 aaPredicted RBP16.53■□□□□ 0.24
GAP43-202ENST00000393780 ADD1P35611 737 aaKnown RBP16.53■□□□□ 0.24
GAP43-202ENST00000393780 PLCB2Q00722 1185 aa16.53■□□□□ 0.24
GAP43-202ENST00000393780 FBXL16Q8N461 479 aa16.53■□□□□ 0.24
GAP43-202ENST00000393780 BICD2Q8TD16 824 aa16.53■□□□□ 0.24
GAP43-202ENST00000393780 RCOR1Q9UKL0 485 aa16.53■□□□□ 0.24
GAP43-202ENST00000393780 EYA2O00167 538 aa16.53■□□□□ 0.24
GAP43-202ENST00000393780 CTAGE5O15320 804 aa16.53■□□□□ 0.24
GAP43-202ENST00000393780 NR1I2O75469 434 aa16.53■□□□□ 0.24
GAP43-202ENST00000393780 PLA2G4DQ86XP0 818 aa16.53■□□□□ 0.24
GAP43-202ENST00000393780 CCDC191Q8NCU4 936 aa16.53■□□□□ 0.24
GAP43-202ENST00000393780 CHMP3Q9Y3E7 222 aa16.53■□□□□ 0.24
GAP43-202ENST00000393780 SALL1Q9NSC2 1324 aa16.52■□□□□ 0.24
GAP43-202ENST00000393780 CHGBP05060 677 aa16.52■□□□□ 0.23
GAP43-202ENST00000393780 LUZP1Q86V48 1076 aa16.52■□□□□ 0.23
GAP43-202ENST00000393780 CKAP2LQ8IYA6 745 aa16.52■□□□□ 0.23
GAP43-202ENST00000393780 PYCARDQ9ULZ3 195 aa16.52■□□□□ 0.23
GAP43-202ENST00000393780 SPATA31A3Q5VYP0 1347 aa16.51■□□□□ 0.23
GAP43-202ENST00000393780 DDX60Q8IY21 1712 aaKnown RBP16.51■□□□□ 0.23
GAP43-202ENST00000393780 ERVV-2B6SEH9 535 aa16.51■□□□□ 0.23
GAP43-202ENST00000393780 GOLIM4O00461 696 aa16.51■□□□□ 0.23
GAP43-202ENST00000393780 RNF113AO15541 343 aaKnown RBP16.51■□□□□ 0.23
GAP43-202ENST00000393780 CTDNEP1O95476 244 aa16.51■□□□□ 0.23
GAP43-202ENST00000393780 CDC25BP30305 580 aa16.51■□□□□ 0.23
GAP43-202ENST00000393780 ZNF75DP51815 510 aa16.51■□□□□ 0.23
GAP43-202ENST00000393780 ZNF274Q96GC6 653 aaPredicted RBP16.51■□□□□ 0.23
GAP43-202ENST00000393780 FBXO3Q9UK99 471 aa16.51■□□□□ 0.23
GAP43-202ENST00000393780 PCDH11XQ9BZA7 1347 aa16.51■□□□□ 0.23
GAP43-202ENST00000393780 PCDH11YQ9BZA8 1340 aa16.51■□□□□ 0.23
GAP43-202ENST00000393780 FGD1P98174 961 aa16.51■□□□□ 0.23
GAP43-202ENST00000393780 C17orf53Q8N3J3 647 aaPredicted RBP16.51■□□□□ 0.23
GAP43-202ENST00000393780 MAST3O60307 1309 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms