RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 MEIS3Q99687 375 aa23.82■■□□□ 1.4
PDLIM7-204ENST00000393546 GPBP1L1Q9HC44 474 aaPredicted RBP23.82■■□□□ 1.4
PDLIM7-204ENST00000393546 XDHP47989 1333 aa23.82■■□□□ 1.4
PDLIM7-204ENST00000393546 AOC3Q16853 763 aa23.81■■□□□ 1.4
PDLIM7-204ENST00000393546 TBC1D16Q8TBP0 767 aa23.81■■□□□ 1.4
PDLIM7-204ENST00000393546 EYA3Q99504 573 aa23.81■■□□□ 1.4
PDLIM7-204ENST00000393546 POLLQ9UGP5 575 aa23.81■■□□□ 1.4
PDLIM7-204ENST00000393546 GGA1Q9UJY5 639 aa23.81■■□□□ 1.4
PDLIM7-204ENST00000393546 KDM2BQ8NHM5 1336 aa23.81■■□□□ 1.4
PDLIM7-204ENST00000393546 GLTPD2A6NH11 291 aa23.8■■□□□ 1.4
PDLIM7-204ENST00000393546 KIAA2012Q0VF49 1180 aa23.8■■□□□ 1.4
PDLIM7-204ENST00000393546 WASHC4Q2M389 1173 aa23.8■■□□□ 1.4
PDLIM7-204ENST00000393546 LDHAL6AQ6ZMR3 332 aa23.8■■□□□ 1.4
PDLIM7-204ENST00000393546 NIM1KQ8IY84 436 aa23.8■■□□□ 1.4
PDLIM7-204ENST00000393546 ZNF594Q96JF6 807 aaPredicted RBP23.8■■□□□ 1.4
PDLIM7-204ENST00000393546 ANKRD2Q9GZV1 360 aa23.8■■□□□ 1.4
PDLIM7-204ENST00000393546 UFL1O94874 794 aa23.79■■□□□ 1.4
PDLIM7-204ENST00000393546 ATP2B4P23634 1241 aa23.79■■□□□ 1.4
PDLIM7-204ENST00000393546 LRRFIP2Q9Y608 721 aaKnown RBP23.79■■□□□ 1.4
PDLIM7-204ENST00000393546 SPEF2Q9C093 1822 aa23.79■■□□□ 1.4
PDLIM7-204ENST00000393546 TIAM2Q8IVF5 1701 aa23.79■■□□□ 1.4
PDLIM7-204ENST00000393546 FZD9O00144 591 aa23.78■■□□□ 1.4
PDLIM7-204ENST00000393546 ITPRIPQ8IWB1 547 aa23.78■■□□□ 1.4
PDLIM7-204ENST00000393546 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.78■■□□□ 1.4
PDLIM7-204ENST00000393546 ZC3H12CQ9C0D7 883 aaKnown RBP23.78■■□□□ 1.4
PDLIM7-204ENST00000393546 CNNM1Q9NRU3 951 aa23.78■■□□□ 1.4
PDLIM7-204ENST00000393546 RIMBP2O15034 1052 aa23.77■■□□□ 1.4
PDLIM7-204ENST00000393546 RLBP1P12271 317 aa23.77■■□□□ 1.4
PDLIM7-204ENST00000393546 EIF6P56537 245 aaKnown RBP23.77■■□□□ 1.4
PDLIM7-204ENST00000393546 GNAI2P04899 355 aa23.76■■□□□ 1.39
PDLIM7-204ENST00000393546 CHRNDQ07001 517 aa23.76■■□□□ 1.39
PDLIM7-204ENST00000393546 PANK1Q8TE04 598 aa23.76■■□□□ 1.39
PDLIM7-204ENST00000393546 LEMD3Q9Y2U8 911 aa23.76■■□□□ 1.39
PDLIM7-204ENST00000393546 DUOX1Q9NRD9 1551 aa23.75■■□□□ 1.39
PDLIM7-204ENST00000393546 PLIN1O60240 522 aa23.75■■□□□ 1.39
PDLIM7-204ENST00000393546 ZNRF3Q9ULT6 936 aa23.75■■□□□ 1.39
PDLIM7-204ENST00000393546 G3V3G9 751 aa23.74■■□□□ 1.39
PDLIM7-204ENST00000393546 DCAF8Q5TAQ9 597 aa23.74■■□□□ 1.39
PDLIM7-204ENST00000393546 GPR101Q96P66 508 aaPredicted RBP23.74■■□□□ 1.39
PDLIM7-204ENST00000393546 LTBP1Q14766 1721 aa23.73■■□□□ 1.39
PDLIM7-204ENST00000393546 DDNO94850 711 aaPredicted RBP23.73■■□□□ 1.39
PDLIM7-204ENST00000393546 KCNJ4P48050 445 aa23.73■■□□□ 1.39
PDLIM7-204ENST00000393546 RRAGCQ9HB90 399 aa23.73■■□□□ 1.39
PDLIM7-204ENST00000393546 ZBTB7BO15156 539 aaPredicted RBP23.72■■□□□ 1.39
PDLIM7-204ENST00000393546 HELBQ8NG08 1087 aaPredicted RBP23.72■■□□□ 1.39
PDLIM7-204ENST00000393546 PUS3Q9BZE2 481 aaKnown RBP23.72■■□□□ 1.39
PDLIM7-204ENST00000393546 NMRK2Q9NPI5 230 aa23.72■■□□□ 1.39
PDLIM7-204ENST00000393546 ZNF804BA4D1E1 1349 aa23.72■■□□□ 1.39
PDLIM7-204ENST00000393546 ZNF541Q9H0D2 1346 aa23.72■■□□□ 1.39
PDLIM7-204ENST00000393546 COL4A5P29400 1685 aa23.72■■□□□ 1.39
PDLIM7-204ENST00000393546 TAF5LO75529 589 aa23.71■■□□□ 1.39
PDLIM7-204ENST00000393546 RFX5P48382 616 aaPredicted RBP23.71■■□□□ 1.39
PDLIM7-204ENST00000393546 DOK7Q18PE1 504 aa23.71■■□□□ 1.39
PDLIM7-204ENST00000393546 RIPOR2Q9Y4F9 1068 aa23.71■■□□□ 1.39
PDLIM7-204ENST00000393546 WTIPA6NIX2 430 aaPredicted RBP23.7■■□□□ 1.38
PDLIM7-204ENST00000393546 GPC2Q8N158 579 aa23.7■■□□□ 1.38
PDLIM7-204ENST00000393546 KLHDC4Q8TBB5 520 aa23.7■■□□□ 1.38
PDLIM7-204ENST00000393546 DBNDD1Q9H9R9 158 aa23.7■■□□□ 1.38
PDLIM7-204ENST00000393546 GJA3Q9Y6H8 435 aa23.7■■□□□ 1.38
PDLIM7-204ENST00000393546 MROH5Q6ZUA9 1318 aa23.69■■□□□ 1.38
PDLIM7-204ENST00000393546 VEGFAP15692 232 aaPredicted RBP23.69■■□□□ 1.38
PDLIM7-204ENST00000393546 PTPN12Q05209 780 aaKnown RBP23.69■■□□□ 1.38
PDLIM7-204ENST00000393546 PDE3AQ14432 1141 aa23.69■■□□□ 1.38
PDLIM7-204ENST00000393546 LRRC24Q50LG9 513 aa23.69■■□□□ 1.38
PDLIM7-204ENST00000393546 SRGAP3O43295 1099 aa23.68■■□□□ 1.38
PDLIM7-204ENST00000393546 ECE2O60344 883 aa23.68■■□□□ 1.38
PDLIM7-204ENST00000393546 CXCL9Q07325 125 aa23.68■■□□□ 1.38
PDLIM7-204ENST00000393546 MTX1Q13505 466 aa23.68■■□□□ 1.38
PDLIM7-204ENST00000393546 MVPQ14764 893 aaKnown RBP23.68■■□□□ 1.38
PDLIM7-204ENST00000393546 TNIP1Q15025 636 aa23.68■■□□□ 1.38
PDLIM7-204ENST00000393546 CIAPIN1Q6FI81 312 aa23.68■■□□□ 1.38
PDLIM7-204ENST00000393546 COG6Q9Y2V7 657 aa23.68■■□□□ 1.38
PDLIM7-204ENST00000393546 MED23Q9ULK4 1368 aa23.67■■□□□ 1.38
PDLIM7-204ENST00000393546 EYA2O00167 538 aa23.67■■□□□ 1.38
PDLIM7-204ENST00000393546 RAD17O75943 681 aa23.67■■□□□ 1.38
PDLIM7-204ENST00000393546 METTL24Q5JXM2 366 aa23.67■■□□□ 1.38
PDLIM7-204ENST00000393546 CHMP4BQ9H444 224 aaKnown RBP23.67■■□□□ 1.38
PDLIM7-204ENST00000393546 FBXO3Q9UK99 471 aa23.67■■□□□ 1.38
PDLIM7-204ENST00000393546 DDX19BQ9UMR2 479 aa23.67■■□□□ 1.38
PDLIM7-204ENST00000393546 YDJCA8MPS7 323 aa23.66■■□□□ 1.38
PDLIM7-204ENST00000393546 KIF3CO14782 793 aa23.66■■□□□ 1.38
PDLIM7-204ENST00000393546 C16orf71Q8IYS4 520 aaPredicted RBP23.66■■□□□ 1.38
PDLIM7-204ENST00000393546 L3MBTL3Q96JM7 780 aaPredicted RBP23.66■■□□□ 1.38
PDLIM7-204ENST00000393546 SNAP23O00161 211 aa23.65■■□□□ 1.38
PDLIM7-204ENST00000393546 UBE4AQ14139 1066 aa23.65■■□□□ 1.38
PDLIM7-204ENST00000393546 PODNQ7Z5L7 613 aa23.65■■□□□ 1.38
PDLIM7-204ENST00000393546 COPRSQ9NQ92 184 aa23.65■■□□□ 1.38
PDLIM7-204ENST00000393546 WDR90Q96KV7 1748 aa23.64■■□□□ 1.38
PDLIM7-204ENST00000393546 IQCA1LA6NCM1 817 aa23.64■■□□□ 1.37
PDLIM7-204ENST00000393546 POTECB2RU33 542 aa23.64■■□□□ 1.37
PDLIM7-204ENST00000393546 CIAO1O76071 339 aa23.64■■□□□ 1.37
PDLIM7-204ENST00000393546 C15orf52Q6ZUT6 534 aaKnown RBP23.64■■□□□ 1.37
PDLIM7-204ENST00000393546 TXNRD3Q86VQ6 643 aa23.64■■□□□ 1.37
PDLIM7-204ENST00000393546 COA1Q9GZY4 146 aa23.64■■□□□ 1.37
PDLIM7-204ENST00000393546 SIL1Q9H173 461 aa23.64■■□□□ 1.37
PDLIM7-204ENST00000393546 C1orf115Q9H7X2 142 aa23.64■■□□□ 1.37
PDLIM7-204ENST00000393546 PDE8BO95263 885 aa23.63■■□□□ 1.37
PDLIM7-204ENST00000393546 ATP8B2P98198 1209 aa23.63■■□□□ 1.37
PDLIM7-204ENST00000393546 C20orf194Q5TEA3 1177 aa23.63■■□□□ 1.37
PDLIM7-204ENST00000393546 PA2G4Q9UQ80 394 aaKnown RBP23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 193.6 ms