RNA–Protein interactions for RNA: ENST00000393164.6

ATP2B1-203, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2B1, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-203ENST00000393164 RFX5P48382 616 aaPredicted RBP4.34□□□□□ -1.71
ATP2B1-203ENST00000393164 PUM3Q15397 648 aaKnown RBP4.34□□□□□ -1.71
ATP2B1-203ENST00000393164 CHD1LQ86WJ1 897 aa4.34□□□□□ -1.71
ATP2B1-203ENST00000393164 SEC31BQ9NQW1 1179 aa4.34□□□□□ -1.71
ATP2B1-203ENST00000393164 PA2G4Q9UQ80 394 aaKnown RBP4.34□□□□□ -1.71
ATP2B1-203ENST00000393164 ERC2O15083 957 aa4.34□□□□□ -1.72
ATP2B1-203ENST00000393164 IGHDP01880 384 aa4.34□□□□□ -1.72
ATP2B1-203ENST00000393164 ATP2B4P23634 1241 aa4.34□□□□□ -1.72
ATP2B1-203ENST00000393164 PTGER2P43116 358 aa4.34□□□□□ -1.72
ATP2B1-203ENST00000393164 NUCB1Q02818 461 aa4.34□□□□□ -1.72
ATP2B1-203ENST00000393164 CAVIN4Q5BKX8 364 aa4.34□□□□□ -1.72
ATP2B1-203ENST00000393164 DALRD3Q5D0E6 543 aaKnown RBP4.34□□□□□ -1.72
ATP2B1-203ENST00000393164 CCDC158Q5M9N0 1113 aa4.34□□□□□ -1.72
ATP2B1-203ENST00000393164 VPS37DQ86XT2 251 aa4.34□□□□□ -1.72
ATP2B1-203ENST00000393164 SP8Q8IXZ3 490 aa4.34□□□□□ -1.72
ATP2B1-203ENST00000393164 RTKN2Q8IZC4 609 aa4.34□□□□□ -1.72
ATP2B1-203ENST00000393164 SUPT20HQ8NEM7 779 aa4.34□□□□□ -1.72
ATP2B1-203ENST00000393164 LPIN2Q92539 896 aa4.34□□□□□ -1.72
ATP2B1-203ENST00000393164 ZNF594Q96JF6 807 aaPredicted RBP4.34□□□□□ -1.72
ATP2B1-203ENST00000393164 EYA3Q99504 573 aa4.34□□□□□ -1.72
ATP2B1-203ENST00000393164 GNL3LQ9NVN8 582 aaKnown RBP4.34□□□□□ -1.72
ATP2B1-203ENST00000393164 LEMD3Q9Y2U8 911 aa4.34□□□□□ -1.72
ATP2B1-203ENST00000393164 ATP6V0A2Q9Y487 856 aa4.34□□□□□ -1.72
ATP2B1-203ENST00000393164 LAMB2P55268 1798 aa4.33□□□□□ -1.72
ATP2B1-203ENST00000393164 CASZ1Q86V15 1759 aa4.33□□□□□ -1.72
ATP2B1-203ENST00000393164 XDHP47989 1333 aa4.33□□□□□ -1.72
ATP2B1-203ENST00000393164 KDM2BQ8NHM5 1336 aa4.33□□□□□ -1.72
ATP2B1-203ENST00000393164 DCAF8L1A6NGE4 600 aa4.33□□□□□ -1.72
ATP2B1-203ENST00000393164 PDE8BO95263 885 aa4.33□□□□□ -1.72
ATP2B1-203ENST00000393164 CHRNDQ07001 517 aa4.33□□□□□ -1.72
ATP2B1-203ENST00000393164 UBE4AQ14139 1066 aa4.33□□□□□ -1.72
ATP2B1-203ENST00000393164 ATP2B3Q16720 1220 aa4.33□□□□□ -1.72
ATP2B1-203ENST00000393164 CELF1Q92879 486 aaKnown RBP4.33□□□□□ -1.72
ATP2B1-203ENST00000393164 SGIP1Q9BQI5 828 aa4.33□□□□□ -1.72
ATP2B1-203ENST00000393164 GGA1Q9UJY5 639 aa4.33□□□□□ -1.72
ATP2B1-203ENST00000393164 RIPOR2Q9Y4F9 1068 aa4.33□□□□□ -1.72
ATP2B1-203ENST00000393164 NRXN2Q9P2S2 1712 aa4.33□□□□□ -1.72
ATP2B1-203ENST00000393164 MYH3P11055 1940 aa4.33□□□□□ -1.72
ATP2B1-203ENST00000393164 G3V3G9 751 aa4.33□□□□□ -1.72
ATP2B1-203ENST00000393164 EIF5BO60841 1220 aaKnown RBP4.33□□□□□ -1.72
ATP2B1-203ENST00000393164 DPEP1P16444 411 aa4.33□□□□□ -1.72
ATP2B1-203ENST00000393164 CCDC93Q567U6 631 aa4.33□□□□□ -1.72
ATP2B1-203ENST00000393164 DCAF8Q5TAQ9 597 aa4.33□□□□□ -1.72
ATP2B1-203ENST00000393164 PRPF40BQ6NWY9 871 aaKnown RBP4.33□□□□□ -1.72
ATP2B1-203ENST00000393164 DPP8Q6V1X1 898 aaPredicted RBP4.33□□□□□ -1.72
ATP2B1-203ENST00000393164 C3orf67Q6ZVT6 689 aa4.33□□□□□ -1.72
ATP2B1-203ENST00000393164 AACSQ86V21 672 aa4.33□□□□□ -1.72
ATP2B1-203ENST00000393164 MPNDQ8N594 471 aa4.33□□□□□ -1.72
ATP2B1-203ENST00000393164 KLHDC4Q8TBB5 520 aa4.33□□□□□ -1.72
ATP2B1-203ENST00000393164 NEUROD6Q96NK8 337 aa4.33□□□□□ -1.72
ATP2B1-203ENST00000393164 LNPKQ9C0E8 428 aa4.33□□□□□ -1.72
ATP2B1-203ENST00000393164 BCL11AQ9H165 835 aa4.33□□□□□ -1.72
ATP2B1-203ENST00000393164 MINPP1Q9UNW1 487 aa4.33□□□□□ -1.72
ATP2B1-203ENST00000393164 NSFL1CQ9UNZ2 370 aaKnown RBP4.33□□□□□ -1.72
ATP2B1-203ENST00000393164 CHRNA5P30532 468 aa4.32□□□□□ -1.72
ATP2B1-203ENST00000393164 TFCP2Q12800 502 aa4.32□□□□□ -1.72
ATP2B1-203ENST00000393164 LRRFIP1Q32MZ4 808 aaKnown RBP4.32□□□□□ -1.72
ATP2B1-203ENST00000393164 LRRC24Q50LG9 513 aa4.32□□□□□ -1.72
ATP2B1-203ENST00000393164 TNNI3KQ59H18 835 aa4.32□□□□□ -1.72
ATP2B1-203ENST00000393164 ATG9AQ7Z3C6 839 aa4.32□□□□□ -1.72
ATP2B1-203ENST00000393164 FPGT-TNNI3KV9GXZ4 949 aa4.32□□□□□ -1.72
ATP2B1-203ENST00000393164 AOX1Q06278 1338 aa4.32□□□□□ -1.72
ATP2B1-203ENST00000393164 TTC41PQ6P2S7 1318 aa4.32□□□□□ -1.72
ATP2B1-203ENST00000393164 A0A0G2JLW4 131 aa4.32□□□□□ -1.72
ATP2B1-203ENST00000393164 A0A1B0GUL7 405 aa4.32□□□□□ -1.72
ATP2B1-203ENST00000393164 C6orf229H3BNL8 230 aa4.32□□□□□ -1.72
ATP2B1-203ENST00000393164 FRAT2O75474 233 aaPredicted RBP4.32□□□□□ -1.72
ATP2B1-203ENST00000393164 GLRX3O76003 335 aaKnown RBP4.32□□□□□ -1.72
ATP2B1-203ENST00000393164 UQCRFS1P1P0C7P4 283 aa4.32□□□□□ -1.72
ATP2B1-203ENST00000393164 MX1P20591 662 aa4.32□□□□□ -1.72
ATP2B1-203ENST00000393164 ZNF804AQ7Z570 1209 aa4.32□□□□□ -1.72
ATP2B1-203ENST00000393164 PUS3Q9BZE2 481 aaKnown RBP4.32□□□□□ -1.72
ATP2B1-203ENST00000393164 VPS33BQ9H267 617 aa4.32□□□□□ -1.72
ATP2B1-203ENST00000393164 IL1RAPL2Q9NP60 686 aa4.32□□□□□ -1.72
ATP2B1-203ENST00000393164 ECHDC1Q9NTX5 307 aa4.32□□□□□ -1.72
ATP2B1-203ENST00000393164 PODXL2Q9NZ53 605 aa4.32□□□□□ -1.72
ATP2B1-203ENST00000393164 ZNF804BA4D1E1 1349 aa4.32□□□□□ -1.72
ATP2B1-203ENST00000393164 DDX60Q8IY21 1712 aaKnown RBP4.32□□□□□ -1.72
ATP2B1-203ENST00000393164 UFL1O94874 794 aa4.32□□□□□ -1.72
ATP2B1-203ENST00000393164 SASH1O94885 1247 aa4.32□□□□□ -1.72
ATP2B1-203ENST00000393164 TTC39AQ5SRH9 613 aa4.32□□□□□ -1.72
ATP2B1-203ENST00000393164 FHDC1Q9C0D6 1143 aaPredicted RBP4.32□□□□□ -1.72
ATP2B1-203ENST00000393164 ZC3H12CQ9C0D7 883 aaKnown RBP4.32□□□□□ -1.72
ATP2B1-203ENST00000393164 BCS1LQ9Y276 419 aa4.32□□□□□ -1.72
ATP2B1-203ENST00000393164 SEMA3EO15041 775 aa4.31□□□□□ -1.72
ATP2B1-203ENST00000393164 IGSF3O75054 1194 aa4.31□□□□□ -1.72
ATP2B1-203ENST00000393164 CASC1Q6TDU7 716 aa4.31□□□□□ -1.72
ATP2B1-203ENST00000393164 C21orf2O43822 256 aa4.31□□□□□ -1.72
ATP2B1-203ENST00000393164 SMARCA5O60264 1052 aaPredicted RBP4.31□□□□□ -1.72
ATP2B1-203ENST00000393164 TAF5LO75529 589 aa4.31□□□□□ -1.72
ATP2B1-203ENST00000393164 HIBADHP31937 336 aaKnown RBP4.31□□□□□ -1.72
ATP2B1-203ENST00000393164 RGS3P49796 1198 aa4.31□□□□□ -1.72
ATP2B1-203ENST00000393164 C15orf52Q6ZUT6 534 aaKnown RBP4.31□□□□□ -1.72
ATP2B1-203ENST00000393164 TICAM2Q86XR7 235 aa4.31□□□□□ -1.72
ATP2B1-203ENST00000393164 ZGPATQ8N5A5 531 aaKnown RBP4.31□□□□□ -1.72
ATP2B1-203ENST00000393164 VGLL2Q8N8G2 317 aa4.31□□□□□ -1.72
ATP2B1-203ENST00000393164 HELBQ8NG08 1087 aaPredicted RBP4.31□□□□□ -1.72
ATP2B1-203ENST00000393164 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.31□□□□□ -1.72
ATP2B1-203ENST00000393164 EAF2Q96CJ1 260 aaPredicted RBP4.31□□□□□ -1.72
ATP2B1-203ENST00000393164 XAGE2Q96GT9 111 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms