RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 CHGBP05060 677 aa13.34□□□□□ -0.27
PDGFD-202ENST00000393158 ARXQ96QS3 562 aa13.34□□□□□ -0.27
PDGFD-202ENST00000393158 GPR108Q9NPR9 543 aa13.34□□□□□ -0.27
PDGFD-202ENST00000393158 FBXO3Q9UK99 471 aa13.34□□□□□ -0.27
PDGFD-202ENST00000393158 MAST2Q6P0Q8 1798 aa13.34□□□□□ -0.27
PDGFD-202ENST00000393158 RBM19Q9Y4C8 960 aaKnown RBP13.33□□□□□ -0.27
PDGFD-202ENST00000393158 SETDB2Q96T68 719 aa13.33□□□□□ -0.28
PDGFD-202ENST00000393158 ADORA1P30542 326 aa13.33□□□□□ -0.28
PDGFD-202ENST00000393158 FER1L6Q2WGJ9 1857 aa13.32□□□□□ -0.28
PDGFD-202ENST00000393158 TBC1D9Q6ZT07 1266 aa13.32□□□□□ -0.28
PDGFD-202ENST00000393158 DBNDD2Q9BQY9 259 aa13.32□□□□□ -0.28
PDGFD-202ENST00000393158 C10orf71Q711Q0 1435 aa13.32□□□□□ -0.28
PDGFD-202ENST00000393158 ADAMTSL1Q8N6G6 1762 aa13.32□□□□□ -0.28
PDGFD-202ENST00000393158 FOCADQ5VW36 1801 aa13.32□□□□□ -0.28
PDGFD-202ENST00000393158 UPF1Q92900 1129 aaKnown RBP eCLIP13.32□□□□□ -0.28
PDGFD-202ENST00000393158 TIMM10P62072 90 aa13.32□□□□□ -0.28
PDGFD-202ENST00000393158 SCARF1Q14162 830 aa13.32□□□□□ -0.28
PDGFD-202ENST00000393158 KIF2CQ99661 725 aa13.32□□□□□ -0.28
PDGFD-202ENST00000393158 CCDC8Q9H0W5 538 aaPredicted RBP13.32□□□□□ -0.28
PDGFD-202ENST00000393158 TFCP2L1Q9NZI6 479 aa13.32□□□□□ -0.28
PDGFD-202ENST00000393158 TTC41PQ6P2S7 1318 aa13.31□□□□□ -0.28
PDGFD-202ENST00000393158 HDAC5Q9UQL6 1122 aa13.31□□□□□ -0.28
PDGFD-202ENST00000393158 IL15P40933 162 aaPredicted RBP13.31□□□□□ -0.28
PDGFD-202ENST00000393158 SGIP1Q9BQI5 828 aa13.31□□□□□ -0.28
PDGFD-202ENST00000393158 NDUFB9Q9Y6M9 179 aa13.31□□□□□ -0.28
PDGFD-202ENST00000393158 SERPINB2P05120 415 aa13.31□□□□□ -0.28
PDGFD-202ENST00000393158 IFIT5Q13325 482 aaKnown RBP13.31□□□□□ -0.28
PDGFD-202ENST00000393158 CCDC88AQ3V6T2 1871 aa13.31□□□□□ -0.28
PDGFD-202ENST00000393158 COL4A5P29400 1685 aa13.3□□□□□ -0.28
PDGFD-202ENST00000393158 AACSQ86V21 672 aa13.3□□□□□ -0.28
PDGFD-202ENST00000393158 ERC1Q8IUD2 1116 aa13.3□□□□□ -0.28
PDGFD-202ENST00000393158 DDX60LQ5H9U9 1706 aaKnown RBP13.3□□□□□ -0.28
PDGFD-202ENST00000393158 KLRK1P26718 216 aa13.3□□□□□ -0.28
PDGFD-202ENST00000393158 HSP90AB4PQ58FF6 505 aa13.3□□□□□ -0.28
PDGFD-202ENST00000393158 NBPF5PQ86XG9 351 aaPredicted RBP13.3□□□□□ -0.28
PDGFD-202ENST00000393158 EDC3Q96F86 508 aaKnown RBP13.3□□□□□ -0.28
PDGFD-202ENST00000393158 A0A1B0GUL7 405 aa13.29□□□□□ -0.28
PDGFD-202ENST00000393158 PDE8BO95263 885 aa13.29□□□□□ -0.28
PDGFD-202ENST00000393158 HOXA10P31260 410 aaPredicted RBP13.29□□□□□ -0.28
PDGFD-202ENST00000393158 ARFGEF1Q9Y6D6 1849 aa13.29□□□□□ -0.28
PDGFD-202ENST00000393158 CCDC57Q2TAC2 916 aa13.29□□□□□ -0.28
PDGFD-202ENST00000393158 SNRKQ9NRH2 765 aa13.29□□□□□ -0.28
PDGFD-202ENST00000393158 NYXQ9GZU5 481 aa13.29□□□□□ -0.28
PDGFD-202ENST00000393158 BSDC1Q9NW68 430 aaPredicted RBP13.28□□□□□ -0.28
PDGFD-202ENST00000393158 MINPP1Q9UNW1 487 aa13.28□□□□□ -0.28
PDGFD-202ENST00000393158 ZNF804BA4D1E1 1349 aa13.28□□□□□ -0.28
PDGFD-202ENST00000393158 ANKRD18BA2A2Z9 1011 aa13.28□□□□□ -0.28
PDGFD-202ENST00000393158 G3BP1Q13283 466 aaKnown RBP eCLIP13.28□□□□□ -0.28
PDGFD-202ENST00000393158 ATP5JP18859 108 aa13.28□□□□□ -0.28
PDGFD-202ENST00000393158 TPTE2Q6XPS3 522 aa13.28□□□□□ -0.28
PDGFD-202ENST00000393158 ECHDC1Q9NTX5 307 aa13.28□□□□□ -0.28
PDGFD-202ENST00000393158 DAXXQ9UER7 740 aaPredicted RBP13.27□□□□□ -0.28
PDGFD-202ENST00000393158 KCNA3P22001 575 aa13.27□□□□□ -0.29
PDGFD-202ENST00000393158 CCDC152Q4G0S7 254 aa13.27□□□□□ -0.29
PDGFD-202ENST00000393158 MSL1Q68DK7 614 aa13.27□□□□□ -0.29
PDGFD-202ENST00000393158 CHMP3Q9Y3E7 222 aa13.27□□□□□ -0.29
PDGFD-202ENST00000393158 ECM29Q5VYK3 1845 aa13.27□□□□□ -0.29
PDGFD-202ENST00000393158 TAF5LO75529 589 aa13.27□□□□□ -0.29
PDGFD-202ENST00000393158 MAP4K4O95819 1239 aaPredicted RBP13.27□□□□□ -0.29
PDGFD-202ENST00000393158 CHRNDQ07001 517 aa13.27□□□□□ -0.29
PDGFD-202ENST00000393158 PI16Q6UXB8 463 aa13.27□□□□□ -0.29
PDGFD-202ENST00000393158 LDHAL6AQ6ZMR3 332 aa13.27□□□□□ -0.29
PDGFD-202ENST00000393158 ILDR2Q71H61 639 aa13.27□□□□□ -0.29
PDGFD-202ENST00000393158 CCDC125Q86Z20 511 aa13.27□□□□□ -0.29
PDGFD-202ENST00000393158 CNBD1Q8NA66 436 aa13.27□□□□□ -0.29
PDGFD-202ENST00000393158 FOXP2O15409 715 aa13.26□□□□□ -0.29
PDGFD-202ENST00000393158 MMP10P09238 476 aa13.26□□□□□ -0.29
PDGFD-202ENST00000393158 SLFNL1Q499Z3 407 aa13.26□□□□□ -0.29
PDGFD-202ENST00000393158 CLASRPQ8N2M8 674 aaKnown RBP13.26□□□□□ -0.29
PDGFD-202ENST00000393158 XAGE2Q96GT9 111 aa13.26□□□□□ -0.29
PDGFD-202ENST00000393158 ZBTB22O15209 634 aa13.26□□□□□ -0.29
PDGFD-202ENST00000393158 SRGNP10124 158 aa13.26□□□□□ -0.29
PDGFD-202ENST00000393158 CHMLP26374 656 aa13.26□□□□□ -0.29
PDGFD-202ENST00000393158 MROH5Q6ZUA9 1318 aa13.26□□□□□ -0.29
PDGFD-202ENST00000393158 TXNRD3Q86VQ6 643 aa13.26□□□□□ -0.29
PDGFD-202ENST00000393158 HELBQ8NG08 1087 aaPredicted RBP13.26□□□□□ -0.29
PDGFD-202ENST00000393158 ZNF512BQ96KM6 892 aaPredicted RBP13.26□□□□□ -0.29
PDGFD-202ENST00000393158 HAUS7Q99871 368 aa13.26□□□□□ -0.29
PDGFD-202ENST00000393158 MCAMP43121 646 aa13.26□□□□□ -0.29
PDGFD-202ENST00000393158 ANTXR1Q9H6X2 564 aa13.25□□□□□ -0.29
PDGFD-202ENST00000393158 MED23Q9ULK4 1368 aa13.25□□□□□ -0.29
PDGFD-202ENST00000393158 ARID4AP29374 1257 aaPredicted RBP13.25□□□□□ -0.29
PDGFD-202ENST00000393158 IL17RAQ96F46 866 aa13.25□□□□□ -0.29
PDGFD-202ENST00000393158 NLGN1Q8N2Q7 840 aa13.25□□□□□ -0.29
PDGFD-202ENST00000393158 FLAD1Q8NFF5 587 aa13.25□□□□□ -0.29
PDGFD-202ENST00000393158 ZNF384Q8TF68 577 aa13.25□□□□□ -0.29
PDGFD-202ENST00000393158 TBC1D32Q96NH3 1257 aa13.25□□□□□ -0.29
PDGFD-202ENST00000393158 COL9A3Q14050 684 aaPredicted RBP13.24□□□□□ -0.29
PDGFD-202ENST00000393158 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.24□□□□□ -0.29
PDGFD-202ENST00000393158 OLFM4Q6UX06 510 aa13.24□□□□□ -0.29
PDGFD-202ENST00000393158 C7orf43Q8WVR3 580 aa13.24□□□□□ -0.29
PDGFD-202ENST00000393158 LAMB1P07942 1786 aa13.23□□□□□ -0.29
PDGFD-202ENST00000393158 BAG6P46379 1132 aa13.23□□□□□ -0.29
PDGFD-202ENST00000393158 PHKA1P46020 1223 aa13.23□□□□□ -0.29
PDGFD-202ENST00000393158 GRAPQ13588 217 aa13.23□□□□□ -0.29
PDGFD-202ENST00000393158 GRAPLQ8TC17 118 aaPredicted RBP13.23□□□□□ -0.29
PDGFD-202ENST00000393158 BRIP1Q9BX63 1249 aa13.23□□□□□ -0.29
PDGFD-202ENST00000393158 MYH2Q9UKX2 1941 aa13.23□□□□□ -0.29
PDGFD-202ENST00000393158 NLRP3Q96P20 1036 aa13.23□□□□□ -0.29
PDGFD-202ENST00000393158 SBF1O95248 1867 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms