RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 MAP2K2P36507 400 aa10.66□□□□□ -0.7
CASP4-201ENST00000393150 EIF6P56537 245 aaKnown RBP10.66□□□□□ -0.7
CASP4-201ENST00000393150 SULT6B1Q6IMI4 303 aa10.66□□□□□ -0.7
CASP4-201ENST00000393150 PRPF40BQ6NWY9 871 aaKnown RBP10.66□□□□□ -0.7
CASP4-201ENST00000393150 ADGRD1Q6QNK2 874 aa10.66□□□□□ -0.7
CASP4-201ENST00000393150 LAPTM4BQ86VI4 370 aa10.66□□□□□ -0.7
CASP4-201ENST00000393150 SPIRE2Q8WWL2 714 aa10.66□□□□□ -0.7
CASP4-201ENST00000393150 RSPH6AQ9H0K4 717 aa10.66□□□□□ -0.7
CASP4-201ENST00000393150 TMX4Q9H1E5 349 aaPredicted RBP10.66□□□□□ -0.7
CASP4-201ENST00000393150 SLC52A2Q9HAB3 445 aa10.66□□□□□ -0.7
CASP4-201ENST00000393150 MYH14Q7Z406 1995 aaKnown RBP10.66□□□□□ -0.7
CASP4-201ENST00000393150 CCDC88AQ3V6T2 1871 aa10.66□□□□□ -0.7
CASP4-201ENST00000393150 COL5A3P25940 1745 aaPredicted RBP10.65□□□□□ -0.7
CASP4-201ENST00000393150 TIAM2Q8IVF5 1701 aa10.65□□□□□ -0.7
CASP4-201ENST00000393150 MAP1SQ66K74 1059 aaPredicted RBP10.65□□□□□ -0.7
CASP4-201ENST00000393150 ZBTB1Q9Y2K1 713 aa10.65□□□□□ -0.7
CASP4-201ENST00000393150 GTF2E1P29083 439 aaPredicted RBP10.64□□□□□ -0.71
CASP4-201ENST00000393150 FKBP4Q02790 459 aaKnown RBP eCLIP10.64□□□□□ -0.71
CASP4-201ENST00000393150 GPC2Q8N158 579 aa10.64□□□□□ -0.71
CASP4-201ENST00000393150 PROCA1Q8NCQ7 364 aaPredicted RBP10.64□□□□□ -0.71
CASP4-201ENST00000393150 DDX21Q9NR30 783 aaKnown RBP eCLIP10.64□□□□□ -0.71
CASP4-201ENST00000393150 ZNF652Q9Y2D9 606 aa10.64□□□□□ -0.71
CASP4-201ENST00000393150 SRGNP10124 158 aa10.63□□□□□ -0.71
CASP4-201ENST00000393150 NPR1P16066 1061 aa10.63□□□□□ -0.71
CASP4-201ENST00000393150 ALDH1B1P30837 517 aa10.63□□□□□ -0.71
CASP4-201ENST00000393150 DGKZQ13574 1117 aa10.63□□□□□ -0.71
CASP4-201ENST00000393150 TBC1D9BQ66K14 1250 aa10.63□□□□□ -0.71
CASP4-201ENST00000393150 PRR5LQ6MZQ0 368 aa10.63□□□□□ -0.71
CASP4-201ENST00000393150 SAMD7Q7Z3H4 446 aa10.63□□□□□ -0.71
CASP4-201ENST00000393150 NBPF5PQ86XG9 351 aaPredicted RBP10.63□□□□□ -0.71
CASP4-201ENST00000393150 PCMTD1Q96MG8 357 aaPredicted RBP10.63□□□□□ -0.71
CASP4-201ENST00000393150 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.63□□□□□ -0.71
CASP4-201ENST00000393150 POLR3EQ9NVU0 708 aa10.63□□□□□ -0.71
CASP4-201ENST00000393150 SCN4AP35499 1836 aa10.63□□□□□ -0.71
CASP4-201ENST00000393150 SLC39A6Q13433 755 aa10.62□□□□□ -0.71
CASP4-201ENST00000393150 TPTE2Q6XPS3 522 aa10.62□□□□□ -0.71
CASP4-201ENST00000393150 MORC1Q86VD1 984 aa10.62□□□□□ -0.71
CASP4-201ENST00000393150 MCOLN1Q9GZU1 580 aa10.62□□□□□ -0.71
CASP4-201ENST00000393150 NBPF3Q9H094 633 aa10.62□□□□□ -0.71
CASP4-201ENST00000393150 ZNF277Q9NRM2 450 aaPredicted RBP10.62□□□□□ -0.71
CASP4-201ENST00000393150 GJA3Q9Y6H8 435 aa10.62□□□□□ -0.71
CASP4-201ENST00000393150 PDE4DIPQ5VU43 2346 aa10.62□□□□□ -0.71
CASP4-201ENST00000393150 RNF123Q5XPI4 1314 aa10.62□□□□□ -0.71
CASP4-201ENST00000393150 IL6STP40189 918 aaPredicted RBP10.61□□□□□ -0.71
CASP4-201ENST00000393150 EIF5P55010 431 aaKnown RBP10.61□□□□□ -0.71
CASP4-201ENST00000393150 TEFQ10587 303 aa10.61□□□□□ -0.71
CASP4-201ENST00000393150 GRIPAP1Q4V328 841 aa10.61□□□□□ -0.71
CASP4-201ENST00000393150 CYP4F22Q6NT55 531 aa10.61□□□□□ -0.71
CASP4-201ENST00000393150 CCDC24Q8N4L8 307 aa10.61□□□□□ -0.71
CASP4-201ENST00000393150 ZFRQ96KR1 1074 aaKnown RBP10.61□□□□□ -0.71
CASP4-201ENST00000393150 LIMD1Q9UGP4 676 aa10.61□□□□□ -0.71
CASP4-201ENST00000393150 TBC1D2BQ9UPU7 963 aa10.61□□□□□ -0.71
CASP4-201ENST00000393150 DICER1Q9UPY3 1922 aaKnown RBP10.61□□□□□ -0.71
CASP4-201ENST00000393150 RNMTO43148 476 aaKnown RBP10.6□□□□□ -0.71
CASP4-201ENST00000393150 IARSP41252 1262 aaKnown RBP10.6□□□□□ -0.71
CASP4-201ENST00000393150 GCGRP47871 477 aa10.6□□□□□ -0.71
CASP4-201ENST00000393150 CC2D2BQ6DHV5 1058 aa10.6□□□□□ -0.71
CASP4-201ENST00000393150 USP50Q70EL3 339 aaPredicted RBP10.6□□□□□ -0.71
CASP4-201ENST00000393150 SYNE4Q8N205 404 aa10.6□□□□□ -0.71
CASP4-201ENST00000393150 RDH13Q8NBN7 331 aa10.6□□□□□ -0.71
CASP4-201ENST00000393150 AFDNP55196 1824 aaKnown RBP10.59□□□□□ -0.71
CASP4-201ENST00000393150 CLK2P49760 499 aaKnown RBP10.59□□□□□ -0.71
CASP4-201ENST00000393150 DIXDC1Q155Q3 683 aa10.59□□□□□ -0.71
CASP4-201ENST00000393150 CLEC4GQ6UXB4 293 aa10.59□□□□□ -0.71
CASP4-201ENST00000393150 AEBP1Q8IUX7 1158 aa10.59□□□□□ -0.71
CASP4-201ENST00000393150 ANKRD26Q9UPS8 1709 aa10.59□□□□□ -0.71
CASP4-201ENST00000393150 DLEC1Q9Y238 1755 aa10.59□□□□□ -0.71
CASP4-201ENST00000393150 FZD9O00144 591 aa10.58□□□□□ -0.71
CASP4-201ENST00000393150 SPTLC1O15269 473 aa10.58□□□□□ -0.71
CASP4-201ENST00000393150 DZIP3Q86Y13 1208 aaKnown RBP10.58□□□□□ -0.71
CASP4-201ENST00000393150 MRPL50Q8N5N7 158 aaKnown RBP10.58□□□□□ -0.71
CASP4-201ENST00000393150 GCC1Q96CN9 775 aa10.58□□□□□ -0.71
CASP4-201ENST00000393150 FMNL2Q96PY5 1086 aa10.58□□□□□ -0.71
CASP4-201ENST00000393150 LGR6Q9HBX8 967 aa10.58□□□□□ -0.71
CASP4-201ENST00000393150 TLL2Q9Y6L7 1015 aa10.58□□□□□ -0.71
CASP4-201ENST00000393150 ZNF541Q9H0D2 1346 aa10.58□□□□□ -0.72
CASP4-201ENST00000393150 MOXD2PA6NHM9 499 aa10.58□□□□□ -0.72
CASP4-201ENST00000393150 CELF2O95319 508 aaKnown RBP10.58□□□□□ -0.72
CASP4-201ENST00000393150 PRPF38BQ5VTL8 546 aaKnown RBP10.58□□□□□ -0.72
CASP4-201ENST00000393150 ANKRD13DQ6ZTN6 518 aa10.58□□□□□ -0.72
CASP4-201ENST00000393150 RIC3Q7Z5B4 369 aa10.58□□□□□ -0.72
CASP4-201ENST00000393150 LARGE2Q8N3Y3 721 aa10.58□□□□□ -0.72
CASP4-201ENST00000393150 FER1L6Q2WGJ9 1857 aa10.57□□□□□ -0.72
CASP4-201ENST00000393150 NRXN2Q9P2S2 1712 aa10.57□□□□□ -0.72
CASP4-201ENST00000393150 VIRMAQ69YN4 1812 aaKnown RBP10.57□□□□□ -0.72
CASP4-201ENST00000393150 KDM4AO75164 1064 aa10.57□□□□□ -0.72
CASP4-201ENST00000393150 NOGQ13253 232 aa10.57□□□□□ -0.72
CASP4-201ENST00000393150 TUSC1Q2TAM9 212 aa10.57□□□□□ -0.72
CASP4-201ENST00000393150 RSBN1LQ6PCB5 846 aaPredicted RBP10.57□□□□□ -0.72
CASP4-201ENST00000393150 NUTM1Q86Y26 1132 aa10.57□□□□□ -0.72
CASP4-201ENST00000393150 NIM1KQ8IY84 436 aa10.57□□□□□ -0.72
CASP4-201ENST00000393150 NBPF15Q8N660 670 aa10.57□□□□□ -0.72
CASP4-201ENST00000393150 HHIPL1Q96JK4 782 aa10.57□□□□□ -0.72
CASP4-201ENST00000393150 PSMD1Q99460 953 aa10.57□□□□□ -0.72
CASP4-201ENST00000393150 KNSTRNQ9Y448 316 aa10.57□□□□□ -0.72
CASP4-201ENST00000393150 AOC2O75106 756 aa10.56□□□□□ -0.72
CASP4-201ENST00000393150 NDUFV2P19404 249 aa10.56□□□□□ -0.72
CASP4-201ENST00000393150 ZNF790Q6PG37 636 aa10.56□□□□□ -0.72
CASP4-201ENST00000393150 ERICH6Q7L0X2 663 aa10.56□□□□□ -0.72
CASP4-201ENST00000393150 SLF2Q8IX21 1173 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms