RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 SRGAP3O43295 1099 aa16.51■□□□□ 0.23
USP44-202ENST00000393091 PRPF40BQ6NWY9 871 aaKnown RBP16.51■□□□□ 0.23
USP44-202ENST00000393091 ANKRD2Q9GZV1 360 aa16.51■□□□□ 0.23
USP44-202ENST00000393091 SEC31BQ9NQW1 1179 aa16.51■□□□□ 0.23
USP44-202ENST00000393091 CHRNA5P30532 468 aa16.51■□□□□ 0.23
USP44-202ENST00000393091 IL15P40933 162 aaPredicted RBP16.51■□□□□ 0.23
USP44-202ENST00000393091 KDM2BQ8NHM5 1336 aa16.51■□□□□ 0.23
USP44-202ENST00000393091 DOCK2Q92608 1830 aa16.5■□□□□ 0.23
USP44-202ENST00000393091 SMC5Q8IY18 1101 aa16.5■□□□□ 0.23
USP44-202ENST00000393091 NLGN2Q8NFZ4 835 aa16.5■□□□□ 0.23
USP44-202ENST00000393091 GCC1Q96CN9 775 aa16.5■□□□□ 0.23
USP44-202ENST00000393091 IGHMBP2P38935 993 aaKnown RBP16.5■□□□□ 0.23
USP44-202ENST00000393091 DALRD3Q5D0E6 543 aaKnown RBP16.5■□□□□ 0.23
USP44-202ENST00000393091 ERC1Q8IUD2 1116 aa16.5■□□□□ 0.23
USP44-202ENST00000393091 A0A0G2JLW4 131 aa16.5■□□□□ 0.23
USP44-202ENST00000393091 NPHP1O15259 732 aa16.5■□□□□ 0.23
USP44-202ENST00000393091 FGFR2P21802 821 aa16.5■□□□□ 0.23
USP44-202ENST00000393091 MINPP1Q9UNW1 487 aa16.5■□□□□ 0.23
USP44-202ENST00000393091 RTKN2Q8IZC4 609 aa16.49■□□□□ 0.23
USP44-202ENST00000393091 LEMD3Q9Y2U8 911 aa16.49■□□□□ 0.23
USP44-202ENST00000393091 MED23Q9ULK4 1368 aa16.48■□□□□ 0.23
USP44-202ENST00000393091 CCDC24Q8N4L8 307 aa16.48■□□□□ 0.23
USP44-202ENST00000393091 AKAP11Q9UKA4 1901 aa16.48■□□□□ 0.23
USP44-202ENST00000393091 XDHP47989 1333 aa16.48■□□□□ 0.23
USP44-202ENST00000393091 RTL5Q5HYW3 569 aaPredicted RBP16.48■□□□□ 0.23
USP44-202ENST00000393091 RWDD1Q9H446 243 aaPredicted RBP16.48■□□□□ 0.23
USP44-202ENST00000393091 C1orf115Q9H7X2 142 aa16.48■□□□□ 0.23
USP44-202ENST00000393091 MAST2Q6P0Q8 1798 aa16.48■□□□□ 0.23
USP44-202ENST00000393091 CHD4Q14839 1912 aa16.48■□□□□ 0.23
USP44-202ENST00000393091 PPP1R1BQ9UD71 204 aaPredicted RBP16.47■□□□□ 0.23
USP44-202ENST00000393091 UBE4AQ14139 1066 aa16.46■□□□□ 0.23
USP44-202ENST00000393091 ATP2B4P23634 1241 aa16.46■□□□□ 0.23
USP44-202ENST00000393091 CCDC93Q567U6 631 aa16.46■□□□□ 0.23
USP44-202ENST00000393091 SUPT20HQ8NEM7 779 aa16.46■□□□□ 0.23
USP44-202ENST00000393091 PDS5AQ29RF7 1337 aaKnown RBP16.46■□□□□ 0.23
USP44-202ENST00000393091 ZNF512BQ96KM6 892 aaPredicted RBP16.46■□□□□ 0.22
USP44-202ENST00000393091 SASH1O94885 1247 aa16.45■□□□□ 0.22
USP44-202ENST00000393091 PDE8BO95263 885 aa16.45■□□□□ 0.22
USP44-202ENST00000393091 IGSF3O75054 1194 aa16.45■□□□□ 0.22
USP44-202ENST00000393091 NEFLP07196 543 aa16.45■□□□□ 0.22
USP44-202ENST00000393091 FKBP4Q02790 459 aaKnown RBP eCLIP16.45■□□□□ 0.22
USP44-202ENST00000393091 LDHAL6AQ6ZMR3 332 aa16.45■□□□□ 0.22
USP44-202ENST00000393091 CHRNDQ07001 517 aa16.44■□□□□ 0.22
USP44-202ENST00000393091 MPHOSPH8Q99549 860 aa16.44■□□□□ 0.22
USP44-202ENST00000393091 ZC3H4Q9UPT8 1303 aaKnown RBP16.44■□□□□ 0.22
USP44-202ENST00000393091 LRRC24Q50LG9 513 aa16.44■□□□□ 0.22
USP44-202ENST00000393091 ZNF622Q969S3 477 aaKnown RBP eCLIP16.44■□□□□ 0.22
USP44-202ENST00000393091 KIF1BPQ96EK5 621 aa16.44■□□□□ 0.22
USP44-202ENST00000393091 ZNF594Q96JF6 807 aaPredicted RBP16.44■□□□□ 0.22
USP44-202ENST00000393091 PUS3Q9BZE2 481 aaKnown RBP16.44■□□□□ 0.22
USP44-202ENST00000393091 SALL3Q9BXA9 1300 aa16.43■□□□□ 0.22
USP44-202ENST00000393091 COL4A5P29400 1685 aa16.43■□□□□ 0.22
USP44-202ENST00000393091 GPSM2P81274 684 aa16.43■□□□□ 0.22
USP44-202ENST00000393091 PPP4R2Q9NY27 417 aa16.43■□□□□ 0.22
USP44-202ENST00000393091 AKAP2Q9Y2D5 859 aa16.43■□□□□ 0.22
USP44-202ENST00000393091 ZNF804BA4D1E1 1349 aa16.43■□□□□ 0.22
USP44-202ENST00000393091 IGHDP01880 384 aa16.42■□□□□ 0.22
USP44-202ENST00000393091 PUM3Q15397 648 aaKnown RBP16.42■□□□□ 0.22
USP44-202ENST00000393091 G3BP1Q13283 466 aaKnown RBP eCLIP16.42■□□□□ 0.22
USP44-202ENST00000393091 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.42■□□□□ 0.22
USP44-202ENST00000393091 TBC1D16Q8TBP0 767 aa16.42■□□□□ 0.22
USP44-202ENST00000393091 PA2G4Q9UQ80 394 aaKnown RBP16.42■□□□□ 0.22
USP44-202ENST00000393091 CENPQQ7L2Z9 268 aaPredicted RBP16.41■□□□□ 0.22
USP44-202ENST00000393091 LPIN2Q92539 896 aa16.41■□□□□ 0.22
USP44-202ENST00000393091 GRIN3BO60391 1043 aa16.41■□□□□ 0.22
USP44-202ENST00000393091 NUCB1Q02818 461 aa16.41■□□□□ 0.22
USP44-202ENST00000393091 MPNDQ8N594 471 aa16.41■□□□□ 0.22
USP44-202ENST00000393091 RHPN1Q8TCX5 695 aa16.41■□□□□ 0.22
USP44-202ENST00000393091 MYH7P12883 1935 aa16.41■□□□□ 0.22
USP44-202ENST00000393091 ECM29Q5VYK3 1845 aa16.41■□□□□ 0.22
USP44-202ENST00000393091 WDR90Q96KV7 1748 aa16.41■□□□□ 0.22
USP44-202ENST00000393091 YBX3P16989 372 aaKnown RBP eCLIP16.4■□□□□ 0.22
USP44-202ENST00000393091 TAF7LQ5H9L4 462 aa16.4■□□□□ 0.22
USP44-202ENST00000393091 TICAM2Q86XR7 235 aa16.4■□□□□ 0.22
USP44-202ENST00000393091 CNNM1Q9NRU3 951 aa16.4■□□□□ 0.22
USP44-202ENST00000393091 NFKBIEO00221 500 aa16.4■□□□□ 0.22
USP44-202ENST00000393091 SURF6O75683 361 aaKnown RBP16.4■□□□□ 0.22
USP44-202ENST00000393091 KLHDC4Q8TBB5 520 aa16.4■□□□□ 0.22
USP44-202ENST00000393091 SCN9AQ15858 1988 aa16.4■□□□□ 0.22
USP44-202ENST00000393091 AOX1Q06278 1338 aa16.4■□□□□ 0.22
USP44-202ENST00000393091 FBXO33Q7Z6M2 555 aa16.4■□□□□ 0.22
USP44-202ENST00000393091 POLLQ9UGP5 575 aa16.4■□□□□ 0.22
USP44-202ENST00000393091 CHMP3Q9Y3E7 222 aa16.4■□□□□ 0.22
USP44-202ENST00000393091 FKBP1AP62942 108 aaKnown RBP16.39■□□□□ 0.21
USP44-202ENST00000393091 KIAA2012Q0VF49 1180 aa16.39■□□□□ 0.21
USP44-202ENST00000393091 EYA3Q99504 573 aa16.39■□□□□ 0.21
USP44-202ENST00000393091 CEP126Q9P2H0 1117 aa16.39■□□□□ 0.21
USP44-202ENST00000393091 GGA1Q9UJY5 639 aa16.39■□□□□ 0.21
USP44-202ENST00000393091 IL1R1P14778 569 aa16.39■□□□□ 0.21
USP44-202ENST00000393091 LRRCC1Q9C099 1032 aa16.39■□□□□ 0.21
USP44-202ENST00000393091 SEMA3EO15041 775 aa16.38■□□□□ 0.21
USP44-202ENST00000393091 TNNI3KQ59H18 835 aa16.38■□□□□ 0.21
USP44-202ENST00000393091 FPGT-TNNI3KV9GXZ4 949 aa16.38■□□□□ 0.21
USP44-202ENST00000393091 TFCP2Q12800 502 aa16.38■□□□□ 0.21
USP44-202ENST00000393091 STAP2Q9UGK3 403 aa16.38■□□□□ 0.21
USP44-202ENST00000393091 C21orf2O43822 256 aa16.38■□□□□ 0.21
USP44-202ENST00000393091 MMP14P50281 582 aa16.38■□□□□ 0.21
USP44-202ENST00000393091 METTL24Q5JXM2 366 aa16.38■□□□□ 0.21
USP44-202ENST00000393091 DPP8Q6V1X1 898 aaPredicted RBP16.38■□□□□ 0.21
USP44-202ENST00000393091 CCDC85AQ96PX6 553 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms