RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 CARD10Q9BWT7 1032 aa17.74■□□□□ 0.43
SHTN1-204ENST00000392903 TMEM51Q9NW97 253 aa17.74■□□□□ 0.43
SHTN1-204ENST00000392903 MORC2Q9Y6X9 1032 aaPredicted RBP17.74■□□□□ 0.43
SHTN1-204ENST00000392903 CHGBP05060 677 aa17.74■□□□□ 0.43
SHTN1-204ENST00000392903 COL9A3Q14050 684 aaPredicted RBP17.74■□□□□ 0.43
SHTN1-204ENST00000392903 FAM200AQ8TCP9 573 aa17.74■□□□□ 0.43
SHTN1-204ENST00000392903 KAT6BQ8WYB5 2073 aa17.74■□□□□ 0.43
SHTN1-204ENST00000392903 LARGE1O95461 756 aa17.73■□□□□ 0.43
SHTN1-204ENST00000392903 SLFN14P0C7P3 912 aa17.73■□□□□ 0.43
SHTN1-204ENST00000392903 DBNDD2Q9BQY9 259 aa17.73■□□□□ 0.43
SHTN1-204ENST00000392903 PAXBP1Q9Y5B6 917 aa17.73■□□□□ 0.43
SHTN1-204ENST00000392903 CREB3L3Q68CJ9 461 aa17.73■□□□□ 0.43
SHTN1-204ENST00000392903 DNAJC2Q99543 621 aaKnown RBP17.73■□□□□ 0.43
SHTN1-204ENST00000392903 PDRG1Q9NUG6 133 aa17.73■□□□□ 0.43
SHTN1-204ENST00000392903 STRCQ7RTU9 1775 aa17.73■□□□□ 0.43
SHTN1-204ENST00000392903 PLEKHG2Q9H7P9 1386 aa17.73■□□□□ 0.43
SHTN1-204ENST00000392903 HIP1O00291 1037 aa17.72■□□□□ 0.43
SHTN1-204ENST00000392903 ZKSCAN1P17029 563 aaPredicted RBP17.72■□□□□ 0.43
SHTN1-204ENST00000392903 FOXO4P98177 505 aa17.72■□□□□ 0.43
SHTN1-204ENST00000392903 ZNF589Q86UQ0 364 aaPredicted RBP17.72■□□□□ 0.43
SHTN1-204ENST00000392903 MAP4K1Q92918 833 aa17.72■□□□□ 0.43
SHTN1-204ENST00000392903 CWC25Q9NXE8 425 aaPredicted RBP17.72■□□□□ 0.43
SHTN1-204ENST00000392903 GLI3P10071 1580 aa17.72■□□□□ 0.43
SHTN1-204ENST00000392903 H7C1W4 665 aa17.72■□□□□ 0.43
SHTN1-204ENST00000392903 TPRNQ4KMQ1 711 aa17.72■□□□□ 0.43
SHTN1-204ENST00000392903 SMC3Q9UQE7 1217 aa17.72■□□□□ 0.43
SHTN1-204ENST00000392903 CYP46A1Q9Y6A2 500 aa17.72■□□□□ 0.43
SHTN1-204ENST00000392903 PARP4Q9UKK3 1724 aaKnown RBP17.72■□□□□ 0.43
SHTN1-204ENST00000392903 KDM4FA0A1W2PPD8 638 aa17.71■□□□□ 0.43
SHTN1-204ENST00000392903 NKX1-1Q15270 411 aaPredicted RBP17.71■□□□□ 0.43
SHTN1-204ENST00000392903 NEUROD6Q96NK8 337 aa17.71■□□□□ 0.43
SHTN1-204ENST00000392903 ZSWIM6Q9HCJ5 1215 aa17.71■□□□□ 0.43
SHTN1-204ENST00000392903 TAF6LQ9Y6J9 622 aa17.71■□□□□ 0.43
SHTN1-204ENST00000392903 CCDC83Q8IWF9 413 aa17.71■□□□□ 0.43
SHTN1-204ENST00000392903 TCEANC2Q96MN5 208 aa17.71■□□□□ 0.43
SHTN1-204ENST00000392903 ATP5JP18859 108 aa17.7■□□□□ 0.42
SHTN1-204ENST00000392903 DNM1Q05193 864 aaKnown RBP17.7■□□□□ 0.42
SHTN1-204ENST00000392903 KIF18AQ8NI77 898 aa17.7■□□□□ 0.42
SHTN1-204ENST00000392903 ZNF594Q96JF6 807 aaPredicted RBP17.7■□□□□ 0.42
SHTN1-204ENST00000392903 C16orf45Q96MC5 204 aaPredicted RBP17.7■□□□□ 0.42
SHTN1-204ENST00000392903 SLC27A2O14975 620 aa17.7■□□□□ 0.42
SHTN1-204ENST00000392903 TNNT1P13805 278 aa17.7■□□□□ 0.42
SHTN1-204ENST00000392903 TIMM10P62072 90 aa17.7■□□□□ 0.42
SHTN1-204ENST00000392903 VPS53Q5VIR6 699 aa17.7■□□□□ 0.42
SHTN1-204ENST00000392903 CCDC186Q7Z3E2 898 aa17.7■□□□□ 0.42
SHTN1-204ENST00000392903 CCDC112Q8NEF3 446 aa17.7■□□□□ 0.42
SHTN1-204ENST00000392903 TMOD3Q9NYL9 352 aa17.7■□□□□ 0.42
SHTN1-204ENST00000392903 DDX46Q7L014 1031 aaKnown RBP17.69■□□□□ 0.42
SHTN1-204ENST00000392903 ASAP1Q9ULH1 1129 aa17.69■□□□□ 0.42
SHTN1-204ENST00000392903 MTMR6Q9Y217 621 aa17.69■□□□□ 0.42
SHTN1-204ENST00000392903 LAMB4A4D0S4 1761 aa17.69■□□□□ 0.42
SHTN1-204ENST00000392903 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.69■□□□□ 0.42
SHTN1-204ENST00000392903 SEC62Q99442 399 aaKnown RBP17.69■□□□□ 0.42
SHTN1-204ENST00000392903 BTG4Q9NY30 223 aa17.69■□□□□ 0.42
SHTN1-204ENST00000392903 MRVI1Q9Y6F6 885 aa17.69■□□□□ 0.42
SHTN1-204ENST00000392903 TERF2Q15554 542 aa17.68■□□□□ 0.42
SHTN1-204ENST00000392903 MAP3K11Q16584 847 aa17.68■□□□□ 0.42
SHTN1-204ENST00000392903 NECAB1Q8N987 351 aa17.68■□□□□ 0.42
SHTN1-204ENST00000392903 KCNB2Q92953 911 aa17.68■□□□□ 0.42
SHTN1-204ENST00000392903 KCPQ6ZWJ8 1503 aa17.68■□□□□ 0.42
SHTN1-204ENST00000392903 TYRO3Q06418 890 aa17.68■□□□□ 0.42
SHTN1-204ENST00000392903 LRMPQ12912 555 aa17.68■□□□□ 0.42
SHTN1-204ENST00000392903 LRRC24Q50LG9 513 aa17.68■□□□□ 0.42
SHTN1-204ENST00000392903 ZSCAN25Q6NSZ9 544 aa17.68■□□□□ 0.42
SHTN1-204ENST00000392903 CCDC129Q6ZRS4 1044 aa17.68■□□□□ 0.42
SHTN1-204ENST00000392903 ATG9AQ7Z3C6 839 aa17.68■□□□□ 0.42
SHTN1-204ENST00000392903 CCDC85AQ96PX6 553 aaPredicted RBP17.68■□□□□ 0.42
SHTN1-204ENST00000392903 TM6SF1Q9BZW5 370 aa17.68■□□□□ 0.42
SHTN1-204ENST00000392903 ME3Q16798 604 aa17.67■□□□□ 0.42
SHTN1-204ENST00000392903 PLA2G4DQ86XP0 818 aa17.67■□□□□ 0.42
SHTN1-204ENST00000392903 CCDC66A2RUB6 948 aa17.67■□□□□ 0.42
SHTN1-204ENST00000392903 SLFNL1Q499Z3 407 aa17.67■□□□□ 0.42
SHTN1-204ENST00000392903 KRT222Q8N1A0 295 aa17.67■□□□□ 0.42
SHTN1-204ENST00000392903 CCDC191Q8NCU4 936 aa17.67■□□□□ 0.42
SHTN1-204ENST00000392903 COL15A1P39059 1388 aa17.66■□□□□ 0.42
SHTN1-204ENST00000392903 TAF5LO75529 589 aa17.66■□□□□ 0.42
SHTN1-204ENST00000392903 GJB2P29033 226 aa17.66■□□□□ 0.42
SHTN1-204ENST00000392903 LUZP1Q86V48 1076 aa17.66■□□□□ 0.42
SHTN1-204ENST00000392903 PIGBQ92521 554 aa17.66■□□□□ 0.42
SHTN1-204ENST00000392903 NUP62CLQ9H1M0 184 aa17.66■□□□□ 0.42
SHTN1-204ENST00000392903 TPCN1Q9ULQ1 816 aa17.66■□□□□ 0.42
SHTN1-204ENST00000392903 UBR2Q8IWV8 1755 aa17.66■□□□□ 0.42
SHTN1-204ENST00000392903 NAA30Q147X3 362 aaPredicted RBP17.66■□□□□ 0.42
SHTN1-204ENST00000392903 RNF20Q5VTR2 975 aa17.66■□□□□ 0.42
SHTN1-204ENST00000392903 DNAJC10Q8IXB1 793 aa17.66■□□□□ 0.42
SHTN1-204ENST00000392903 PUS3Q9BZE2 481 aaKnown RBP17.66■□□□□ 0.42
SHTN1-204ENST00000392903 SNRKQ9NRH2 765 aa17.66■□□□□ 0.42
SHTN1-204ENST00000392903 FAM53CQ9NYF3 392 aa17.66■□□□□ 0.42
SHTN1-204ENST00000392903 MED23Q9ULK4 1368 aa17.65■□□□□ 0.42
SHTN1-204ENST00000392903 ELP1O95163 1332 aa17.65■□□□□ 0.42
SHTN1-204ENST00000392903 ZNF75DP51815 510 aa17.65■□□□□ 0.42
SHTN1-204ENST00000392903 ZNF397Q8NF99 534 aaPredicted RBP17.65■□□□□ 0.42
SHTN1-204ENST00000392903 FAM193AP78312 1265 aa17.64■□□□□ 0.42
SHTN1-204ENST00000392903 HAUS7Q99871 368 aa17.64■□□□□ 0.42
SHTN1-204ENST00000392903 CBX8Q9HC52 389 aa17.64■□□□□ 0.42
SHTN1-204ENST00000392903 NRBP1Q9UHY1 535 aa17.64■□□□□ 0.42
SHTN1-204ENST00000392903 GOLIM4O00461 696 aa17.64■□□□□ 0.41
SHTN1-204ENST00000392903 PSMA5P28066 241 aa17.64■□□□□ 0.41
SHTN1-204ENST00000392903 ST3GAL1Q11201 340 aa17.64■□□□□ 0.41
SHTN1-204ENST00000392903 BLOC1S2Q6QNY1 142 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms