RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 PRM3Q9NNZ6 103 aa19.21■□□□□ 0.67
SCN3B-202ENST00000392770 KCNQ3O43525 872 aa19.21■□□□□ 0.67
SCN3B-202ENST00000392770 ZFYVE27Q5T4F4 411 aa19.21■□□□□ 0.67
SCN3B-202ENST00000392770 CEP152O94986 1710 aa19.21■□□□□ 0.67
SCN3B-202ENST00000392770 IFIT1BQ5T764 474 aaKnown RBP19.21■□□□□ 0.67
SCN3B-202ENST00000392770 ESR2Q92731 530 aa19.21■□□□□ 0.67
SCN3B-202ENST00000392770 ABCA9Q8IUA7 1624 aa19.21■□□□□ 0.67
SCN3B-202ENST00000392770 PRC1O43663 620 aa19.21■□□□□ 0.67
SCN3B-202ENST00000392770 TSPY3P0CV98 308 aa19.21■□□□□ 0.67
SCN3B-202ENST00000392770 TSPY8P0CW00 308 aa19.21■□□□□ 0.67
SCN3B-202ENST00000392770 GLI2P10070 1586 aa19.2■□□□□ 0.66
SCN3B-202ENST00000392770 RUFY3Q7L099 469 aa19.2■□□□□ 0.66
SCN3B-202ENST00000392770 ZNF496Q96IT1 587 aaPredicted RBP19.2■□□□□ 0.66
SCN3B-202ENST00000392770 TEX35Q5T0J7 233 aa19.2■□□□□ 0.66
SCN3B-202ENST00000392770 KLHL10Q6JEL2 608 aa19.2■□□□□ 0.66
SCN3B-202ENST00000392770 CUL5Q93034 780 aa19.2■□□□□ 0.66
SCN3B-202ENST00000392770 PHKG2P15735 406 aa19.2■□□□□ 0.66
SCN3B-202ENST00000392770 F8W031 263 aaPredicted RBP19.2■□□□□ 0.66
SCN3B-202ENST00000392770 EYA2O00167 538 aa19.2■□□□□ 0.66
SCN3B-202ENST00000392770 CCDC12Q8WUD4 166 aaPredicted RBP19.2■□□□□ 0.66
SCN3B-202ENST00000392770 TMEM94Q12767 1356 aa19.2■□□□□ 0.66
SCN3B-202ENST00000392770 ARHGAP31Q2M1Z3 1444 aa19.2■□□□□ 0.66
SCN3B-202ENST00000392770 KLHL40Q2TBA0 621 aa19.2■□□□□ 0.66
SCN3B-202ENST00000392770 FAM177A1Q8N128 213 aaPredicted RBP19.2■□□□□ 0.66
SCN3B-202ENST00000392770 MIGA1Q8NAN2 632 aa19.2■□□□□ 0.66
SCN3B-202ENST00000392770 ACBD3Q9H3P7 528 aa19.2■□□□□ 0.66
SCN3B-202ENST00000392770 TMEM266Q2M3C6 531 aa19.19■□□□□ 0.66
SCN3B-202ENST00000392770 ZSCAN23Q3MJ62 389 aa19.19■□□□□ 0.66
SCN3B-202ENST00000392770 AOX1Q06278 1338 aa19.19■□□□□ 0.66
SCN3B-202ENST00000392770 ZNF771Q7L3S4 317 aaPredicted RBP19.19■□□□□ 0.66
SCN3B-202ENST00000392770 CHST3Q7LGC8 479 aa19.19■□□□□ 0.66
SCN3B-202ENST00000392770 ZNF594Q96JF6 807 aaPredicted RBP19.19■□□□□ 0.66
SCN3B-202ENST00000392770 PRR36Q9H6K5 1346 aa19.19■□□□□ 0.66
SCN3B-202ENST00000392770 A0A1B0GUL7 405 aa19.19■□□□□ 0.66
SCN3B-202ENST00000392770 PRIM1P49642 420 aaKnown RBP19.19■□□□□ 0.66
SCN3B-202ENST00000392770 ALG1Q9BT22 464 aa19.19■□□□□ 0.66
SCN3B-202ENST00000392770 GNAT2P19087 354 aa19.18■□□□□ 0.66
SCN3B-202ENST00000392770 GCKRQ14397 625 aa19.18■□□□□ 0.66
SCN3B-202ENST00000392770 HELLSQ9NRZ9 838 aa19.18■□□□□ 0.66
SCN3B-202ENST00000392770 ESPNB1AK53 854 aa19.18■□□□□ 0.66
SCN3B-202ENST00000392770 RTN1Q16799 776 aa19.18■□□□□ 0.66
SCN3B-202ENST00000392770 E9PCH4 1651 aa19.18■□□□□ 0.66
SCN3B-202ENST00000392770 ANKRD2Q9GZV1 360 aa19.18■□□□□ 0.66
SCN3B-202ENST00000392770 TNIP1Q15025 636 aa19.18■□□□□ 0.66
SCN3B-202ENST00000392770 WWC2Q6AWC2 1192 aa19.18■□□□□ 0.66
SCN3B-202ENST00000392770 F13A1P00488 732 aa19.17■□□□□ 0.66
SCN3B-202ENST00000392770 TMTC2Q8N394 836 aa19.17■□□□□ 0.66
SCN3B-202ENST00000392770 TFCP2L1Q9NZI6 479 aa19.17■□□□□ 0.66
SCN3B-202ENST00000392770 BCORL1Q5H9F3 1711 aa19.17■□□□□ 0.66
SCN3B-202ENST00000392770 ERVV-2B6SEH9 535 aa19.17■□□□□ 0.66
SCN3B-202ENST00000392770 EIF5P55010 431 aaKnown RBP19.17■□□□□ 0.66
SCN3B-202ENST00000392770 TIMM10P62072 90 aa19.17■□□□□ 0.66
SCN3B-202ENST00000392770 STX1AQ16623 288 aa19.17■□□□□ 0.66
SCN3B-202ENST00000392770 TRAPPC3LQ5T215 181 aa19.17■□□□□ 0.66
SCN3B-202ENST00000392770 USP48Q86UV5 1035 aa19.17■□□□□ 0.66
SCN3B-202ENST00000392770 RAB34Q9BZG1 259 aa19.17■□□□□ 0.66
SCN3B-202ENST00000392770 MADDQ8WXG6 1647 aa19.17■□□□□ 0.66
SCN3B-202ENST00000392770 APOBRQ0VD83 1088 aa19.17■□□□□ 0.66
SCN3B-202ENST00000392770 HCLS1P14317 486 aaPredicted RBP19.17■□□□□ 0.66
SCN3B-202ENST00000392770 FAM98CQ17RN3 349 aaKnown RBP19.17■□□□□ 0.66
SCN3B-202ENST00000392770 CCNL1Q9UK58 526 aaPredicted RBP19.17■□□□□ 0.66
SCN3B-202ENST00000392770 PDE8AO60658 829 aa19.16■□□□□ 0.66
SCN3B-202ENST00000392770 PICALMQ13492 652 aa19.16■□□□□ 0.66
SCN3B-202ENST00000392770 PARP10Q53GL7 1025 aa19.16■□□□□ 0.66
SCN3B-202ENST00000392770 USP25Q9UHP3 1055 aa19.16■□□□□ 0.66
SCN3B-202ENST00000392770 NOM1Q5C9Z4 860 aaKnown RBP19.16■□□□□ 0.66
SCN3B-202ENST00000392770 TRMT2AQ8IZ69 625 aaKnown RBP19.16■□□□□ 0.66
SCN3B-202ENST00000392770 KDRP35968 1356 aa19.16■□□□□ 0.66
SCN3B-202ENST00000392770 RTL1A6NKG5 1358 aa19.16■□□□□ 0.66
SCN3B-202ENST00000392770 CCDC129Q6ZRS4 1044 aa19.16■□□□□ 0.66
SCN3B-202ENST00000392770 DNAJC10Q8IXB1 793 aa19.16■□□□□ 0.66
SCN3B-202ENST00000392770 DBNDD2Q9BQY9 259 aa19.16■□□□□ 0.66
SCN3B-202ENST00000392770 LUC7LQ9NQ29 371 aaKnown RBP19.16■□□□□ 0.66
SCN3B-202ENST00000392770 CCDC87Q9NVE4 849 aa19.16■□□□□ 0.66
SCN3B-202ENST00000392770 STX8Q9UNK0 236 aa19.16■□□□□ 0.66
SCN3B-202ENST00000392770 A2ML1A8K2U0 1454 aa19.16■□□□□ 0.66
SCN3B-202ENST00000392770 BIN1O00499 593 aa19.16■□□□□ 0.66
SCN3B-202ENST00000392770 GIGYF1O75420 1035 aaPredicted RBP19.16■□□□□ 0.66
SCN3B-202ENST00000392770 CCDC112Q8NEF3 446 aa19.16■□□□□ 0.66
SCN3B-202ENST00000392770 CABP5Q9NP86 173 aa19.16■□□□□ 0.66
SCN3B-202ENST00000392770 CLIP2Q9UDT6 1046 aa19.15■□□□□ 0.66
SCN3B-202ENST00000392770 CCDC178Q5BJE1 867 aa19.15■□□□□ 0.66
SCN3B-202ENST00000392770 XAGE2Q96GT9 111 aa19.15■□□□□ 0.66
SCN3B-202ENST00000392770 ZSCAN30Q86W11 494 aa19.15■□□□□ 0.66
SCN3B-202ENST00000392770 PARP3Q9Y6F1 533 aa19.15■□□□□ 0.66
SCN3B-202ENST00000392770 RBM25P49756 843 aaKnown RBP19.14■□□□□ 0.66
SCN3B-202ENST00000392770 TXLNBQ8N3L3 684 aa19.14■□□□□ 0.66
SCN3B-202ENST00000392770 PANK2Q9BZ23 570 aa19.14■□□□□ 0.66
SCN3B-202ENST00000392770 NEURL1BA8MQ27 555 aa19.14■□□□□ 0.65
SCN3B-202ENST00000392770 QRICH2Q9H0J4 1663 aa19.14■□□□□ 0.65
SCN3B-202ENST00000392770 ALKQ9UM73 1620 aa19.14■□□□□ 0.65
SCN3B-202ENST00000392770 PUM3Q15397 648 aaKnown RBP19.14■□□□□ 0.65
SCN3B-202ENST00000392770 TSG101Q99816 390 aa19.14■□□□□ 0.65
SCN3B-202ENST00000392770 SH3TC1Q8TE82 1336 aa19.14■□□□□ 0.65
SCN3B-202ENST00000392770 HSP90B2PQ58FF3 399 aa19.14■□□□□ 0.65
SCN3B-202ENST00000392770 IGSF1Q8N6C5 1336 aa19.14■□□□□ 0.65
SCN3B-202ENST00000392770 RAB3GAP1Q15042 981 aa19.13■□□□□ 0.65
SCN3B-202ENST00000392770 CDK12Q9NYV4 1490 aaPredicted RBP19.13■□□□□ 0.65
SCN3B-202ENST00000392770 MATR3P43243 847 aaKnown RBP eCLIP19.13■□□□□ 0.65
SCN3B-202ENST00000392770 RBM17Q96I25 401 aaKnown RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms