RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 SPATA32Q96LK8 384 aa12.82□□□□□ -0.36
BRF1-204ENST00000392557 IGSF3O75054 1194 aa12.82□□□□□ -0.36
BRF1-204ENST00000392557 PTPN12Q05209 780 aaKnown RBP12.82□□□□□ -0.36
BRF1-204ENST00000392557 NMIQ13287 307 aaPredicted RBP12.82□□□□□ -0.36
BRF1-204ENST00000392557 BLOC1S2Q6QNY1 142 aa12.82□□□□□ -0.36
BRF1-204ENST00000392557 EVI5LQ96CN4 794 aa12.82□□□□□ -0.36
BRF1-204ENST00000392557 PYCARDQ9ULZ3 195 aa12.82□□□□□ -0.36
BRF1-204ENST00000392557 RBM8AQ9Y5S9 174 aaKnown RBP12.82□□□□□ -0.36
BRF1-204ENST00000392557 PDCL2Q8N4E4 241 aa12.81□□□□□ -0.36
BRF1-204ENST00000392557 DBNDD2Q9BQY9 259 aa12.81□□□□□ -0.36
BRF1-204ENST00000392557 DACT1Q9NYF0 836 aa12.81□□□□□ -0.36
BRF1-204ENST00000392557 SIPA1L3O60292 1781 aaPredicted RBP12.81□□□□□ -0.36
BRF1-204ENST00000392557 UTYO14607 1347 aa12.81□□□□□ -0.36
BRF1-204ENST00000392557 ME3Q16798 604 aa12.81□□□□□ -0.36
BRF1-204ENST00000392557 ZSCAN31Q96LW9 406 aaPredicted RBP12.81□□□□□ -0.36
BRF1-204ENST00000392557 CCDC94Q9BW85 323 aaPredicted RBP12.81□□□□□ -0.36
BRF1-204ENST00000392557 RPAP1Q9BWH6 1393 aaPredicted RBP12.81□□□□□ -0.36
BRF1-204ENST00000392557 TAF7LQ5H9L4 462 aa12.81□□□□□ -0.36
BRF1-204ENST00000392557 CCDC186Q7Z3E2 898 aa12.81□□□□□ -0.36
BRF1-204ENST00000392557 FAM89AQ96GI7 184 aa12.81□□□□□ -0.36
BRF1-204ENST00000392557 ACSBG1Q96GR2 724 aa12.81□□□□□ -0.36
BRF1-204ENST00000392557 MTMR6Q9Y217 621 aa12.81□□□□□ -0.36
BRF1-204ENST00000392557 EXOC5O00471 708 aa12.8□□□□□ -0.36
BRF1-204ENST00000392557 CHGBP05060 677 aa12.8□□□□□ -0.36
BRF1-204ENST00000392557 TIMM10P62072 90 aa12.8□□□□□ -0.36
BRF1-204ENST00000392557 DDX46Q7L014 1031 aaKnown RBP12.8□□□□□ -0.36
BRF1-204ENST00000392557 CDC37L1Q7L3B6 337 aa12.8□□□□□ -0.36
BRF1-204ENST00000392557 DBNLQ9UJU6 430 aaKnown RBP12.8□□□□□ -0.36
BRF1-204ENST00000392557 GOLGA6L19H0YKK7 550 aa12.8□□□□□ -0.36
BRF1-204ENST00000392557 ANO6Q4KMQ2 910 aa12.8□□□□□ -0.36
BRF1-204ENST00000392557 TNNI3KQ59H18 835 aa12.8□□□□□ -0.36
BRF1-204ENST00000392557 RNF20Q5VTR2 975 aa12.8□□□□□ -0.36
BRF1-204ENST00000392557 KIF6Q6ZMV9 814 aa12.8□□□□□ -0.36
BRF1-204ENST00000392557 FPGT-TNNI3KV9GXZ4 949 aa12.8□□□□□ -0.36
BRF1-204ENST00000392557 LIG1P18858 919 aa12.8□□□□□ -0.36
BRF1-204ENST00000392557 SH2B1Q9NRF2 756 aaPredicted RBP12.8□□□□□ -0.36
BRF1-204ENST00000392557 RIOK3O14730 519 aaKnown RBP12.79□□□□□ -0.36
BRF1-204ENST00000392557 PSMA5P28066 241 aa12.79□□□□□ -0.36
BRF1-204ENST00000392557 A0A0D9SFI3 127 aa12.79□□□□□ -0.36
BRF1-204ENST00000392557 TYRO3Q06418 890 aa12.79□□□□□ -0.36
BRF1-204ENST00000392557 TPD52L1Q16890 204 aaPredicted RBP12.79□□□□□ -0.36
BRF1-204ENST00000392557 BCL2L12Q9HB09 334 aa12.79□□□□□ -0.36
BRF1-204ENST00000392557 SRCAPQ6ZRS2 3230 aa12.79□□□□□ -0.36
BRF1-204ENST00000392557 STARD3NLO95772 234 aa12.79□□□□□ -0.36
BRF1-204ENST00000392557 PDCP20941 246 aa12.79□□□□□ -0.36
BRF1-204ENST00000392557 LRRC24Q50LG9 513 aa12.79□□□□□ -0.36
BRF1-204ENST00000392557 CREB3L3Q68CJ9 461 aa12.79□□□□□ -0.36
BRF1-204ENST00000392557 SYNE4Q8N205 404 aa12.79□□□□□ -0.36
BRF1-204ENST00000392557 TTC14Q96N46 770 aa12.79□□□□□ -0.36
BRF1-204ENST00000392557 COPRSQ9NQ92 184 aa12.79□□□□□ -0.36
BRF1-204ENST00000392557 TPCN1Q9ULQ1 816 aa12.79□□□□□ -0.36
BRF1-204ENST00000392557 BECN2A8MW95 431 aa12.78□□□□□ -0.36
BRF1-204ENST00000392557 LRMPQ12912 555 aa12.78□□□□□ -0.36
BRF1-204ENST00000392557 VPS53Q5VIR6 699 aa12.78□□□□□ -0.36
BRF1-204ENST00000392557 TTC6Q86TZ1 520 aa12.78□□□□□ -0.36
BRF1-204ENST00000392557 FAM200AQ8TCP9 573 aa12.78□□□□□ -0.36
BRF1-204ENST00000392557 LRRC2Q9BYS8 371 aa12.78□□□□□ -0.36
BRF1-204ENST00000392557 TCHHQ07283 1943 aa12.78□□□□□ -0.36
BRF1-204ENST00000392557 GORABQ5T7V8 394 aa12.78□□□□□ -0.36
BRF1-204ENST00000392557 ATG3Q9NT62 314 aa12.78□□□□□ -0.36
BRF1-204ENST00000392557 TBC1D2BQ9UPU7 963 aa12.78□□□□□ -0.36
BRF1-204ENST00000392557 N4BP2Q86UW6 1770 aaPredicted RBP12.78□□□□□ -0.36
BRF1-204ENST00000392557 NPHP1O15259 732 aa12.78□□□□□ -0.36
BRF1-204ENST00000392557 RFX5P48382 616 aaPredicted RBP12.78□□□□□ -0.36
BRF1-204ENST00000392557 ZRSR1Q15695 479 aaKnown RBP12.78□□□□□ -0.36
BRF1-204ENST00000392557 DHX37Q8IY37 1157 aaKnown RBP12.78□□□□□ -0.36
BRF1-204ENST00000392557 PUS3Q9BZE2 481 aaKnown RBP12.78□□□□□ -0.36
BRF1-204ENST00000392557 NKX1-1Q15270 411 aaPredicted RBP12.77□□□□□ -0.36
BRF1-204ENST00000392557 CCDC129Q6ZRS4 1044 aa12.77□□□□□ -0.36
BRF1-204ENST00000392557 DNAJC25Q9H1X3 360 aa12.77□□□□□ -0.36
BRF1-204ENST00000392557 TPM3P06753 285 aa12.77□□□□□ -0.37
BRF1-204ENST00000392557 CCDC57Q2TAC2 916 aa12.77□□□□□ -0.37
BRF1-204ENST00000392557 SLFNL1Q499Z3 407 aa12.77□□□□□ -0.37
BRF1-204ENST00000392557 CCDC171Q6TFL3 1326 aa12.77□□□□□ -0.37
BRF1-204ENST00000392557 AP5Z1O43299 807 aa12.76□□□□□ -0.37
BRF1-204ENST00000392557 ZNF165P49910 485 aa12.76□□□□□ -0.37
BRF1-204ENST00000392557 FILIP1Q7Z7B0 1213 aa12.76□□□□□ -0.37
BRF1-204ENST00000392557 SEC62Q99442 399 aaKnown RBP12.76□□□□□ -0.37
BRF1-204ENST00000392557 NRBP1Q9UHY1 535 aa12.76□□□□□ -0.37
BRF1-204ENST00000392557 USP42Q9H9J4 1324 aaKnown RBP12.76□□□□□ -0.37
BRF1-204ENST00000392557 CRYBG1Q9Y4K1 1723 aa12.76□□□□□ -0.37
BRF1-204ENST00000392557 H7C1W4 665 aa12.76□□□□□ -0.37
BRF1-204ENST00000392557 GOLIM4O00461 696 aa12.76□□□□□ -0.37
BRF1-204ENST00000392557 U2AF2P26368 475 aaKnown RBP eCLIP12.76□□□□□ -0.371e-6■■■□□ 16.3
BRF1-204ENST00000392557 FOXO4P98177 505 aa12.76□□□□□ -0.37
BRF1-204ENST00000392557 CCDC191Q8NCU4 936 aa12.76□□□□□ -0.37
BRF1-204ENST00000392557 SNRKQ9NRH2 765 aa12.76□□□□□ -0.37
BRF1-204ENST00000392557 COL9A3Q14050 684 aaPredicted RBP12.76□□□□□ -0.37
BRF1-204ENST00000392557 ZNF589Q86UQ0 364 aaPredicted RBP12.76□□□□□ -0.37
BRF1-204ENST00000392557 TMEM87AQ8NBN3 555 aa12.76□□□□□ -0.37
BRF1-204ENST00000392557 ADAMTS7Q9UKP4 1686 aa12.75□□□□□ -0.37
BRF1-204ENST00000392557 MRC1P22897 1456 aa12.75□□□□□ -0.37
BRF1-204ENST00000392557 TNNT1P13805 278 aa12.75□□□□□ -0.37
BRF1-204ENST00000392557 CLIP2Q9UDT6 1046 aa12.75□□□□□ -0.37
BRF1-204ENST00000392557 ZBTB1Q9Y2K1 713 aa12.75□□□□□ -0.37
BRF1-204ENST00000392557 CASP7P55210 303 aa12.75□□□□□ -0.37
BRF1-204ENST00000392557 FKBP4Q02790 459 aaKnown RBP eCLIP12.75□□□□□ -0.37
BRF1-204ENST00000392557 HLFQ16534 295 aa12.75□□□□□ -0.37
BRF1-204ENST00000392557 RABL6Q3YEC7 729 aaPredicted RBP12.75□□□□□ -0.37
BRF1-204ENST00000392557 KIAA1524Q8TCG1 905 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms