RNA–Protein interactions for RNA: ENST00000392023.1

SPTBN4-203, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best) BASIC

Gene SPTBN4, Length 2,419 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-203ENST00000392023 COL22A1Q8NFW1 1626 aaPredicted RBP25.4■■□□□ 1.66
SPTBN4-203ENST00000392023 UBN2Q6ZU65 1347 aa25.4■■□□□ 1.66
SPTBN4-203ENST00000392023 PTMSP20962 102 aa25.4■■□□□ 1.66
SPTBN4-203ENST00000392023 KCNQ4P56696 695 aa25.4■■□□□ 1.66
SPTBN4-203ENST00000392023 LDHAL6AQ6ZMR3 332 aa25.4■■□□□ 1.66
SPTBN4-203ENST00000392023 GPT2Q8TD30 523 aa25.4■■□□□ 1.66
SPTBN4-203ENST00000392023 RBM27Q9P2N5 1060 aaKnown RBP25.4■■□□□ 1.66
SPTBN4-203ENST00000392023 SCARF1Q14162 830 aa25.39■■□□□ 1.66
SPTBN4-203ENST00000392023 RNF20Q5VTR2 975 aa25.39■■□□□ 1.66
SPTBN4-203ENST00000392023 DOT1LQ8TEK3 1739 aa25.39■■□□□ 1.66
SPTBN4-203ENST00000392023 PLCH1Q4KWH8 1693 aa25.39■■□□□ 1.66
SPTBN4-203ENST00000392023 A0A0G2JLW4 131 aa25.39■■□□□ 1.66
SPTBN4-203ENST00000392023 ST3GAL1Q11201 340 aa25.39■■□□□ 1.66
SPTBN4-203ENST00000392023 BLOC1S2Q6QNY1 142 aa25.39■■□□□ 1.66
SPTBN4-203ENST00000392023 SMC3Q9UQE7 1217 aa25.39■■□□□ 1.66
SPTBN4-203ENST00000392023 RPAP1Q9BWH6 1393 aaPredicted RBP25.38■■□□□ 1.65
SPTBN4-203ENST00000392023 CRKLP46109 303 aaKnown RBP25.38■■□□□ 1.65
SPTBN4-203ENST00000392023 INTS5Q6P9B9 1019 aaKnown RBP25.38■■□□□ 1.65
SPTBN4-203ENST00000392023 PDCL3Q9H2J4 239 aa25.38■■□□□ 1.65
SPTBN4-203ENST00000392023 IL6STP40189 918 aaPredicted RBP25.37■■□□□ 1.65
SPTBN4-203ENST00000392023 STK3Q13188 491 aa25.37■■□□□ 1.65
SPTBN4-203ENST00000392023 ITPK1Q13572 414 aa25.37■■□□□ 1.65
SPTBN4-203ENST00000392023 METTL24Q5JXM2 366 aa25.37■■□□□ 1.65
SPTBN4-203ENST00000392023 TTC39AQ5SRH9 613 aa25.37■■□□□ 1.65
SPTBN4-203ENST00000392023 PLA2G12BQ9BX93 195 aa25.37■■□□□ 1.65
SPTBN4-203ENST00000392023 HCLS1P14317 486 aaPredicted RBP25.37■■□□□ 1.65
SPTBN4-203ENST00000392023 SYT1P21579 422 aa25.37■■□□□ 1.65
SPTBN4-203ENST00000392023 PSMA5P28066 241 aa25.37■■□□□ 1.65
SPTBN4-203ENST00000392023 GJB2P29033 226 aa25.37■■□□□ 1.65
SPTBN4-203ENST00000392023 CTSWP56202 376 aa25.37■■□□□ 1.65
SPTBN4-203ENST00000392023 RBM10P98175 930 aaKnown RBP25.37■■□□□ 1.65
SPTBN4-203ENST00000392023 FAM98CQ17RN3 349 aaKnown RBP25.37■■□□□ 1.65
SPTBN4-203ENST00000392023 HSP90AB3PQ58FF7 597 aa25.37■■□□□ 1.65
SPTBN4-203ENST00000392023 LOC102724428A0A0B4J2F2 783 aa25.36■■□□□ 1.65
SPTBN4-203ENST00000392023 CYP21A2P08686 494 aa25.36■■□□□ 1.65
SPTBN4-203ENST00000392023 SIK1P57059 783 aa25.36■■□□□ 1.65
SPTBN4-203ENST00000392023 GRPEL1Q9HAV7 217 aa25.36■■□□□ 1.65
SPTBN4-203ENST00000392023 CNNM1Q9NRU3 951 aa25.36■■□□□ 1.65
SPTBN4-203ENST00000392023 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.36■■□□□ 1.65
SPTBN4-203ENST00000392023 SPATA31A5Q5VU36 1347 aa25.36■■□□□ 1.65
SPTBN4-203ENST00000392023 SPATA31A7Q8IWB4 1347 aa25.36■■□□□ 1.65
SPTBN4-203ENST00000392023 LRRC2Q9BYS8 371 aa25.36■■□□□ 1.65
SPTBN4-203ENST00000392023 CCDC158Q5M9N0 1113 aa25.35■■□□□ 1.65
SPTBN4-203ENST00000392023 HELBQ8NG08 1087 aaPredicted RBP25.35■■□□□ 1.65
SPTBN4-203ENST00000392023 LRP6O75581 1613 aa25.35■■□□□ 1.65
SPTBN4-203ENST00000392023 TCHHQ07283 1943 aa25.35■■□□□ 1.65
SPTBN4-203ENST00000392023 RPS6KB1P23443 525 aa25.35■■□□□ 1.65
SPTBN4-203ENST00000392023 SMIM5Q71RC9 77 aa25.35■■□□□ 1.65
SPTBN4-203ENST00000392023 RIPOR2Q9Y4F9 1068 aa25.35■■□□□ 1.65
SPTBN4-203ENST00000392023 NUP98P52948 1817 aa25.35■■□□□ 1.65
SPTBN4-203ENST00000392023 USPL1Q5W0Q7 1092 aa25.34■■□□□ 1.65
SPTBN4-203ENST00000392023 C8orf37Q96NL8 207 aa25.34■■□□□ 1.65
SPTBN4-203ENST00000392023 THRAP3Q9Y2W1 955 aaKnown RBP25.34■■□□□ 1.65
SPTBN4-203ENST00000392023 WDR33Q9C0J8 1336 aaKnown RBP25.34■■□□□ 1.65
SPTBN4-203ENST00000392023 ANKRD18BA2A2Z9 1011 aa25.34■■□□□ 1.65
SPTBN4-203ENST00000392023 TPM2P07951 284 aa25.34■■□□□ 1.65
SPTBN4-203ENST00000392023 EIF5P55010 431 aaKnown RBP25.34■■□□□ 1.65
SPTBN4-203ENST00000392023 TOB2Q14106 344 aaPredicted RBP25.34■■□□□ 1.65
SPTBN4-203ENST00000392023 SUSD4Q5VX71 490 aa25.34■■□□□ 1.65
SPTBN4-203ENST00000392023 CDCA7Q9BWT1 371 aaPredicted RBP25.34■■□□□ 1.65
SPTBN4-203ENST00000392023 CCDC87Q9NVE4 849 aa25.34■■□□□ 1.65
SPTBN4-203ENST00000392023 STX6O43752 255 aa25.33■■□□□ 1.65
SPTBN4-203ENST00000392023 ZAP70P43403 619 aa25.33■■□□□ 1.65
SPTBN4-203ENST00000392023 PRDM4Q9UKN5 801 aa25.33■■□□□ 1.65
SPTBN4-203ENST00000392023 AKAP2Q9Y2D5 859 aa25.33■■□□□ 1.65
SPTBN4-203ENST00000392023 JCADQ9P266 1359 aa25.33■■□□□ 1.65
SPTBN4-203ENST00000392023 CDHR2Q9BYE9 1310 aa25.33■■□□□ 1.64
SPTBN4-203ENST00000392023 SNAP23O00161 211 aa25.33■■□□□ 1.64
SPTBN4-203ENST00000392023 ZNF34Q8IZ26 560 aa25.32■■□□□ 1.64
SPTBN4-203ENST00000392023 M0R2C6 588 aa25.32■■□□□ 1.64
SPTBN4-203ENST00000392023 ATP2B3Q16720 1220 aa25.32■■□□□ 1.64
SPTBN4-203ENST00000392023 PTF1AQ7RTS3 328 aa25.32■■□□□ 1.64
SPTBN4-203ENST00000392023 OSBP2Q969R2 916 aa25.32■■□□□ 1.64
SPTBN4-203ENST00000392023 NEK1Q96PY6 1258 aa25.32■■□□□ 1.64
SPTBN4-203ENST00000392023 ERVV-1B6SEH8 477 aa25.31■■□□□ 1.64
SPTBN4-203ENST00000392023 RNF113AO15541 343 aaKnown RBP25.31■■□□□ 1.64
SPTBN4-203ENST00000392023 TOM1O60784 492 aa25.31■■□□□ 1.64
SPTBN4-203ENST00000392023 GADD45BO75293 160 aaPredicted RBP25.31■■□□□ 1.64
SPTBN4-203ENST00000392023 MRE11P49959 708 aa25.31■■□□□ 1.64
SPTBN4-203ENST00000392023 ZMYM1Q5SVZ6 1142 aa25.31■■□□□ 1.64
SPTBN4-203ENST00000392023 STOX1Q6ZVD7 989 aa25.31■■□□□ 1.64
SPTBN4-203ENST00000392023 ZSCAN31Q96LW9 406 aaPredicted RBP25.31■■□□□ 1.64
SPTBN4-203ENST00000392023 HMG20BQ9P0W2 317 aa25.31■■□□□ 1.64
SPTBN4-203ENST00000392023 PALLDQ8WX93 1383 aa25.31■■□□□ 1.64
SPTBN4-203ENST00000392023 MAST3O60307 1309 aa25.31■■□□□ 1.64
SPTBN4-203ENST00000392023 PDE8AO60658 829 aa25.31■■□□□ 1.64
SPTBN4-203ENST00000392023 ZSCAN23Q3MJ62 389 aa25.31■■□□□ 1.64
SPTBN4-203ENST00000392023 U3KPZ7 1027 aaPredicted RBP25.31■■□□□ 1.64
SPTBN4-203ENST00000392023 WNK3Q9BYP7 1800 aa25.3■■□□□ 1.64
SPTBN4-203ENST00000392023 SH3TC1Q8TE82 1336 aa25.3■■□□□ 1.64
SPTBN4-203ENST00000392023 ZSCAN22P10073 491 aaPredicted RBP25.3■■□□□ 1.64
SPTBN4-203ENST00000392023 WASHC4Q2M389 1173 aa25.3■■□□□ 1.64
SPTBN4-203ENST00000392023 NGLY1Q96IV0 654 aa25.3■■□□□ 1.64
SPTBN4-203ENST00000392023 SH2B1Q9NRF2 756 aaPredicted RBP25.3■■□□□ 1.64
SPTBN4-203ENST00000392023 HSPD1P10809 573 aaKnown RBP25.29■■□□□ 1.64
SPTBN4-203ENST00000392023 TTLL5Q6EMB2 1281 aa25.29■■□□□ 1.64
SPTBN4-203ENST00000392023 CNPY2Q9Y2B0 182 aa25.29■■□□□ 1.64
SPTBN4-203ENST00000392023 FAM182BQ5T319 152 aa25.29■■□□□ 1.64
SPTBN4-203ENST00000392023 SEC31BQ9NQW1 1179 aa25.29■■□□□ 1.64
SPTBN4-203ENST00000392023 HELLSQ9NRZ9 838 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms