RNA–Protein interactions for RNA: ENST00000391945.8

ERCC2-204, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC2, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-204ENST00000391945 ZBTB38Q8NAP3 1195 aaPredicted RBP15.11■□□□□ 0.01
ERCC2-204ENST00000391945 ANO8Q9HCE9 1232 aaPredicted RBP15.11■□□□□ 0.01
ERCC2-204ENST00000391945 RNF113AO15541 343 aaKnown RBP15.11■□□□□ 0.01
ERCC2-204ENST00000391945 HLFQ16534 295 aa15.11■□□□□ 0.01
ERCC2-204ENST00000391945 OSBPL3Q9H4L5 887 aa15.11■□□□□ 0.01
ERCC2-204ENST00000391945 HMG20BQ9P0W2 317 aa15.11■□□□□ 0.01
ERCC2-204ENST00000391945 STAP2Q9UGK3 403 aa15.11■□□□□ 0.01
ERCC2-204ENST00000391945 SNX14Q9Y5W7 946 aa15.11■□□□□ 0.01
ERCC2-204ENST00000391945 PTPN12Q05209 780 aaKnown RBP15.1■□□□□ 0.01
ERCC2-204ENST00000391945 PARP10Q53GL7 1025 aa15.1■□□□□ 0.01
ERCC2-204ENST00000391945 TRAPPC3LQ5T215 181 aa15.1■□□□□ 0.01
ERCC2-204ENST00000391945 MIGA1Q8NAN2 632 aa15.1■□□□□ 0.01
ERCC2-204ENST00000391945 A0A0D9SFI3 127 aa15.1■□□□□ 0.01
ERCC2-204ENST00000391945 CD2BP2O95400 341 aaKnown RBP15.1■□□□□ 0.01
ERCC2-204ENST00000391945 TFIP11Q9UBB9 837 aaKnown RBP15.1■□□□□ 0.01
ERCC2-204ENST00000391945 STX6O43752 255 aa15.1■□□□□ 0.01
ERCC2-204ENST00000391945 PTH1RQ03431 593 aa15.1■□□□□ 0.01
ERCC2-204ENST00000391945 CREBRFQ8IUR6 639 aa15.1■□□□□ 0.01
ERCC2-204ENST00000391945 TFCP2L1Q9NZI6 479 aa15.1■□□□□ 0.01
ERCC2-204ENST00000391945 RAD50Q92878 1312 aa15.1■□□□□ 0.01
ERCC2-204ENST00000391945 BECN2A8MW95 431 aa15.1■□□□□ 0.01
ERCC2-204ENST00000391945 RANBP6O60518 1105 aaKnown RBP15.1■□□□□ 0.01
ERCC2-204ENST00000391945 PCCAP05165 728 aaPredicted RBP15.1■□□□□ 0.01
ERCC2-204ENST00000391945 ZFYP08048 801 aaPredicted RBP15.1■□□□□ 0.01
ERCC2-204ENST00000391945 SLC3A2P08195 630 aaKnown RBP15.1■□□□□ 0.01
ERCC2-204ENST00000391945 CYP7A1P22680 504 aa15.1■□□□□ 0.01
ERCC2-204ENST00000391945 CTSWP56202 376 aa15.1■□□□□ 0.01
ERCC2-204ENST00000391945 KBTBD3Q8NAB2 608 aa15.1■□□□□ 0.01
ERCC2-204ENST00000391945 SDF4Q9BRK5 362 aa15.1■□□□□ 0.01
ERCC2-204ENST00000391945 SYCE3A1L190 88 aa15.09■□□□□ 0.01
ERCC2-204ENST00000391945 GOLGA8BA8MQT2 603 aa15.09■□□□□ 0.01
ERCC2-204ENST00000391945 KCNQ2O43526 872 aa15.09■□□□□ 0.01
ERCC2-204ENST00000391945 HMGB1P09429 215 aaKnown RBP15.09■□□□□ 0.01
ERCC2-204ENST00000391945 ZAP70P43403 619 aa15.09■□□□□ 0.01
ERCC2-204ENST00000391945 NSFL1CQ9UNZ2 370 aaKnown RBP15.09■□□□□ 0.01
ERCC2-204ENST00000391945 XRCC6P12956 609 aaKnown RBP eCLIP15.09■□□□□ 0.01
ERCC2-204ENST00000391945 ATP5JP18859 108 aa15.09■□□□□ 0.01
ERCC2-204ENST00000391945 ATP2B2Q01814 1243 aa15.09■□□□□ 0.01
ERCC2-204ENST00000391945 Q6ZUG5 572 aa15.09■□□□□ 0.01
ERCC2-204ENST00000391945 RBM5P52756 815 aaKnown RBP eCLIP15.09■□□□□ 0.012e-7■□□□□ 11
ERCC2-204ENST00000391945 STK38Q15208 465 aa15.09■□□□□ 0.01
ERCC2-204ENST00000391945 ME1P48163 572 aa15.08■□□□□ 0.01
ERCC2-204ENST00000391945 MAGEB6Q8N7X4 407 aa15.08■□□□□ 0.01
ERCC2-204ENST00000391945 IFIT3O14879 490 aaKnown RBP15.08■□□□□ 0
ERCC2-204ENST00000391945 IL6STP40189 918 aaPredicted RBP15.08■□□□□ 0
ERCC2-204ENST00000391945 USP5P45974 858 aa15.08■□□□□ 0
ERCC2-204ENST00000391945 MICU3Q86XE3 530 aa15.08■□□□□ 0
ERCC2-204ENST00000391945 SPATA32Q96LK8 384 aa15.08■□□□□ 0
ERCC2-204ENST00000391945 RBM27Q9P2N5 1060 aaKnown RBP15.08■□□□□ 0
ERCC2-204ENST00000391945 GOLGA6L6A8MZA4 724 aa15.08■□□□□ 0
ERCC2-204ENST00000391945 MARCH6O60337 910 aa15.08■□□□□ 0
ERCC2-204ENST00000391945 ADORA1P30542 326 aa15.07■□□□□ 0
ERCC2-204ENST00000391945 FAM43AQ8N2R8 423 aa15.07■□□□□ 0
ERCC2-204ENST00000391945 NRXN3Q9Y4C0 1643 aa15.07■□□□□ 0
ERCC2-204ENST00000391945 GOLGA6L19H0YKK7 550 aa15.07■□□□□ 0
ERCC2-204ENST00000391945 NLRP10Q86W26 655 aa15.07■□□□□ 0
ERCC2-204ENST00000391945 TRIM22Q8IYM9 498 aa15.07■□□□□ 0
ERCC2-204ENST00000391945 SHPRHQ149N8 1683 aa15.07■□□□□ 0
ERCC2-204ENST00000391945 SLC27A2O14975 620 aa15.07■□□□□ 0
ERCC2-204ENST00000391945 NYXQ9GZU5 481 aa15.07■□□□□ 0
ERCC2-204ENST00000391945 WWC3Q9ULE0 1092 aa15.07■□□□□ 0
ERCC2-204ENST00000391945 HSPA4P34932 840 aa15.06■□□□□ 0
ERCC2-204ENST00000391945 VPS53Q5VIR6 699 aa15.06■□□□□ 0
ERCC2-204ENST00000391945 SASS6Q6UVJ0 657 aa15.06■□□□□ 0
ERCC2-204ENST00000391945 ZNF622Q969S3 477 aaKnown RBP eCLIP15.06■□□□□ 0
ERCC2-204ENST00000391945 CCDC34Q96HJ3 373 aa15.06■□□□□ 0
ERCC2-204ENST00000391945 PUM3Q15397 648 aaKnown RBP15.06■□□□□ 0
ERCC2-204ENST00000391945 NCOA7Q8NI08 942 aa15.06■□□□□ 0
ERCC2-204ENST00000391945 SLC4A4Q9Y6R1 1079 aa15.06■□□□□ 0
ERCC2-204ENST00000391945 ADGRB2O60241 1585 aa15.06■□□□□ 0
ERCC2-204ENST00000391945 SMIM5Q71RC9 77 aa15.06■□□□□ 0
ERCC2-204ENST00000391945 PXDNQ92626 1479 aa15.06■□□□□ 0
ERCC2-204ENST00000391945 RAB3GAP1Q15042 981 aa15.06■□□□□ 0
ERCC2-204ENST00000391945 USPL1Q5W0Q7 1092 aa15.06■□□□□ 0
ERCC2-204ENST00000391945 RUFY3Q7L099 469 aa15.06■□□□□ 0
ERCC2-204ENST00000391945 PI4K2BQ8TCG2 481 aa15.06■□□□□ 0
ERCC2-204ENST00000391945 MEGF6O75095 1541 aa15.05■□□□□ 0
ERCC2-204ENST00000391945 KLF18A0A0U1RQI7 1052 aa15.05■□□□□ 0
ERCC2-204ENST00000391945 PDIA6Q15084 440 aa15.05■□□□□ 0
ERCC2-204ENST00000391945 RASEFQ8IZ41 740 aa15.05■□□□□ 0
ERCC2-204ENST00000391945 SEC31BQ9NQW1 1179 aa15.05■□□□□ 0
ERCC2-204ENST00000391945 H7C1W4 665 aa15.05■□□□□ -0
ERCC2-204ENST00000391945 ST5P78524 1137 aa15.05■□□□□ -0
ERCC2-204ENST00000391945 QTRT2Q9H974 415 aaKnown RBP15.05■□□□□ -0
ERCC2-204ENST00000391945 XBP1P17861 261 aa15.05■□□□□ -0
ERCC2-204ENST00000391945 CNBD1Q8NA66 436 aa15.05■□□□□ -0
ERCC2-204ENST00000391945 MCM5P33992 734 aa15.04■□□□□ -0
ERCC2-204ENST00000391945 APOBRQ0VD83 1088 aa15.04■□□□□ -0
ERCC2-204ENST00000391945 TMEM67Q5HYA8 995 aa15.04■□□□□ -0
ERCC2-204ENST00000391945 PI16Q6UXB8 463 aa15.04■□□□□ -0
ERCC2-204ENST00000391945 ZNF396Q96N95 335 aaPredicted RBP15.04■□□□□ -0
ERCC2-204ENST00000391945 SNAP23O00161 211 aa15.04■□□□□ -0
ERCC2-204ENST00000391945 KINO60870 393 aaKnown RBP15.04■□□□□ -0
ERCC2-204ENST00000391945 POLR3DP05423 398 aaPredicted RBP15.04■□□□□ -0
ERCC2-204ENST00000391945 MTX1Q13505 466 aa15.04■□□□□ -0
ERCC2-204ENST00000391945 NAA16Q6N069 864 aaPredicted RBP15.04■□□□□ -0
ERCC2-204ENST00000391945 MFSD6Q6ZSS7 791 aa15.04■□□□□ -0
ERCC2-204ENST00000391945 ZSCAN29Q8IWY8 852 aaPredicted RBP15.04■□□□□ -0
ERCC2-204ENST00000391945 VSIG10Q8N0Z9 540 aa15.04■□□□□ -0
ERCC2-204ENST00000391945 SLC12A7Q9Y666 1083 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms