RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 PMEPA1Q969W9 287 aa10.85□□□□□ -0.67
SNORA40.4-201ENST00000390971 RBSNQ9H1K0 784 aa10.85□□□□□ -0.67
SNORA40.4-201ENST00000390971 BIN2Q9UBW5 565 aaPredicted RBP10.85□□□□□ -0.67
SNORA40.4-201ENST00000390971 GHRHP01286 108 aa10.84□□□□□ -0.67
SNORA40.4-201ENST00000390971 AEBP1Q8IUX7 1158 aa10.84□□□□□ -0.67
SNORA40.4-201ENST00000390971 NUDT8Q8WV74 236 aa10.84□□□□□ -0.67
SNORA40.4-201ENST00000390971 NSUN5Q96P11 429 aaKnown RBP10.84□□□□□ -0.67
SNORA40.4-201ENST00000390971 JPH1Q9HDC5 661 aaPredicted RBP10.84□□□□□ -0.67
SNORA40.4-201ENST00000390971 CNTN3Q9P232 1028 aa10.84□□□□□ -0.67
SNORA40.4-201ENST00000390971 NAGPAQ9UK23 515 aa10.84□□□□□ -0.67
SNORA40.4-201ENST00000390971 J3QW42 95 aa10.83□□□□□ -0.68
SNORA40.4-201ENST00000390971 EIF2AK2P19525 551 aaKnown RBP10.83□□□□□ -0.68
SNORA40.4-201ENST00000390971 PDE3BQ13370 1112 aa10.83□□□□□ -0.68
SNORA40.4-201ENST00000390971 PERM1Q5SV97 790 aa10.83□□□□□ -0.68
SNORA40.4-201ENST00000390971 TTC9Q92623 222 aa10.83□□□□□ -0.68
SNORA40.4-201ENST00000390971 SPACA7Q96KW9 195 aa10.83□□□□□ -0.68
SNORA40.4-201ENST00000390971 NOP53Q9NZM5 478 aaKnown RBP10.83□□□□□ -0.68
SNORA40.4-201ENST00000390971 CES1P23141 567 aa10.82□□□□□ -0.68
SNORA40.4-201ENST00000390971 C8orf86Q6ZUL3 223 aa10.82□□□□□ -0.68
SNORA40.4-201ENST00000390971 SPDYE3A6NKU9 549 aa10.81□□□□□ -0.68
SNORA40.4-201ENST00000390971 TNFRSF21O75509 655 aa10.81□□□□□ -0.68
SNORA40.4-201ENST00000390971 CYP2E1P05181 493 aaPredicted RBP10.81□□□□□ -0.68
SNORA40.4-201ENST00000390971 RASSF7Q02833 373 aa10.81□□□□□ -0.68
SNORA40.4-201ENST00000390971 C1orf127Q8N9H9 656 aa10.81□□□□□ -0.68
SNORA40.4-201ENST00000390971 LPIN3Q9BQK8 851 aa10.81□□□□□ -0.68
SNORA40.4-201ENST00000390971 SMG9Q9H0W8 520 aaKnown RBP10.81□□□□□ -0.68
SNORA40.4-201ENST00000390971 KIF4AO95239 1232 aa10.8□□□□□ -0.68
SNORA40.4-201ENST00000390971 NEFLP07196 543 aa10.8□□□□□ -0.68
SNORA40.4-201ENST00000390971 NCAPG2Q86XI2 1143 aa10.8□□□□□ -0.68
SNORA40.4-201ENST00000390971 TMC1Q8TDI8 760 aa10.8□□□□□ -0.68
SNORA40.4-201ENST00000390971 SNX29Q8TEQ0 813 aa10.8□□□□□ -0.68
SNORA40.4-201ENST00000390971 PLD4Q96BZ4 506 aa10.8□□□□□ -0.68
SNORA40.4-201ENST00000390971 PLVAPQ9BX97 442 aa10.8□□□□□ -0.68
SNORA40.4-201ENST00000390971 PHACTR2O75167 634 aa10.79□□□□□ -0.68
SNORA40.4-201ENST00000390971 AFF1P51825 1210 aaKnown RBP10.79□□□□□ -0.68
SNORA40.4-201ENST00000390971 COL9A3Q14050 684 aaPredicted RBP10.79□□□□□ -0.68
SNORA40.4-201ENST00000390971 COL13A1Q5TAT6 717 aaPredicted RBP10.79□□□□□ -0.68
SNORA40.4-201ENST00000390971 ALYREFQ86V81 257 aaKnown RBP10.79□□□□□ -0.68
SNORA40.4-201ENST00000390971 TRIM11Q96F44 468 aa10.79□□□□□ -0.68
SNORA40.4-201ENST00000390971 NID1P14543 1247 aa10.78□□□□□ -0.68
SNORA40.4-201ENST00000390971 FAM129BQ96TA1 746 aa10.78□□□□□ -0.68
SNORA40.4-201ENST00000390971 RBCK1Q9BYM8 510 aa10.78□□□□□ -0.68
SNORA40.4-201ENST00000390971 SUV39H2Q9H5I1 410 aa10.78□□□□□ -0.68
SNORA40.4-201ENST00000390971 SALL4Q9UJQ4 1053 aa10.78□□□□□ -0.68
SNORA40.4-201ENST00000390971 DCTN4Q9UJW0 460 aa10.78□□□□□ -0.68
SNORA40.4-201ENST00000390971 GSK3AP49840 483 aa10.77□□□□□ -0.69
SNORA40.4-201ENST00000390971 TMEM151AQ8N4L1 468 aa10.77□□□□□ -0.69
SNORA40.4-201ENST00000390971 CHRDQ9H2X0 955 aa10.77□□□□□ -0.69
SNORA40.4-201ENST00000390971 GDF11O95390 407 aa10.76□□□□□ -0.69
SNORA40.4-201ENST00000390971 TRAPPC3LQ5T215 181 aa10.76□□□□□ -0.69
SNORA40.4-201ENST00000390971 CEP120Q8N960 986 aa10.76□□□□□ -0.69
SNORA40.4-201ENST00000390971 ZFYVE28Q9HCC9 887 aa10.76□□□□□ -0.69
SNORA40.4-201ENST00000390971 KANSL3Q9P2N6 904 aa10.76□□□□□ -0.69
SNORA40.4-201ENST00000390971 FOXD3Q9UJU5 478 aaPredicted RBP10.76□□□□□ -0.69
SNORA40.4-201ENST00000390971 GRIK5Q16478 980 aa10.75□□□□□ -0.69
SNORA40.4-201ENST00000390971 CACTIN-AS1Q8N1I8 211 aa10.75□□□□□ -0.69
SNORA40.4-201ENST00000390971 DMRTB1Q96MA1 342 aa10.75□□□□□ -0.69
SNORA40.4-201ENST00000390971 EREGO14944 169 aa10.74□□□□□ -0.69
SNORA40.4-201ENST00000390971 SMNDC1O75940 238 aaKnown RBP eCLIP10.74□□□□□ -0.69
SNORA40.4-201ENST00000390971 COL8A1P27658 744 aa10.74□□□□□ -0.69
SNORA40.4-201ENST00000390971 TRIM28Q13263 835 aaKnown RBP10.74□□□□□ -0.69
SNORA40.4-201ENST00000390971 PRRT3Q5FWE3 981 aa10.74□□□□□ -0.69
SNORA40.4-201ENST00000390971 HOMEZQ8IX15 550 aa10.74□□□□□ -0.69
SNORA40.4-201ENST00000390971 AMOTL2Q9Y2J4 779 aa10.74□□□□□ -0.69
SNORA40.4-201ENST00000390971 EDN3P14138 238 aa10.73□□□□□ -0.69
SNORA40.4-201ENST00000390971 MAPK1P28482 360 aa10.73□□□□□ -0.69
SNORA40.4-201ENST00000390971 MSL1Q68DK7 614 aa10.73□□□□□ -0.69
SNORA40.4-201ENST00000390971 WFDC8Q8IUA0 241 aa10.73□□□□□ -0.69
SNORA40.4-201ENST00000390971 DCAF5Q96JK2 942 aa10.73□□□□□ -0.69
SNORA40.4-201ENST00000390971 PBX4Q9BYU1 374 aa10.73□□□□□ -0.69
SNORA40.4-201ENST00000390971 CEP135Q66GS9 1140 aa10.72□□□□□ -0.69
SNORA40.4-201ENST00000390971 GDF6Q6KF10 455 aaPredicted RBP10.72□□□□□ -0.69
SNORA40.4-201ENST00000390971 DMRTC2Q8IXT2 367 aaPredicted RBP10.72□□□□□ -0.69
SNORA40.4-201ENST00000390971 RASSF4Q9H2L5 321 aa10.72□□□□□ -0.69
SNORA40.4-201ENST00000390971 RAC1P63000 192 aa10.71□□□□□ -0.69
SNORA40.4-201ENST00000390971 ATP11AP98196 1134 aa10.71□□□□□ -0.69
SNORA40.4-201ENST00000390971 ILDR2Q71H61 639 aa10.71□□□□□ -0.69
SNORA40.4-201ENST00000390971 NIF3L1Q9GZT8 377 aa10.71□□□□□ -0.69
SNORA40.4-201ENST00000390971 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.71□□□□□ -0.69
SNORA40.4-201ENST00000390971 IGHA2P01877 340 aa10.7□□□□□ -0.7
SNORA40.4-201ENST00000390971 SPATA31C1P0DKV0 1188 aa10.7□□□□□ -0.7
SNORA40.4-201ENST00000390971 TMC7Q7Z402 723 aa10.7□□□□□ -0.7
SNORA40.4-201ENST00000390971 ZSCAN29Q8IWY8 852 aaPredicted RBP10.7□□□□□ -0.7
SNORA40.4-201ENST00000390971 IL22RA1Q8N6P7 574 aa10.7□□□□□ -0.7
SNORA40.4-201ENST00000390971 ALKBH8Q96BT7 664 aaKnown RBP10.7□□□□□ -0.7
SNORA40.4-201ENST00000390971 DZANK1Q9NVP4 752 aa10.7□□□□□ -0.7
SNORA40.4-201ENST00000390971 TRIM33Q9UPN9 1127 aa10.7□□□□□ -0.7
SNORA40.4-201ENST00000390971 GPR182O15218 404 aa10.69□□□□□ -0.7
SNORA40.4-201ENST00000390971 CPNE3O75131 537 aaKnown RBP10.69□□□□□ -0.7
SNORA40.4-201ENST00000390971 DTWD1Q8N5C7 304 aa10.69□□□□□ -0.7
SNORA40.4-201ENST00000390971 MUC3BQ9H195 1237 aa10.69□□□□□ -0.7
SNORA40.4-201ENST00000390971 DNAJC25Q9H1X3 360 aa10.69□□□□□ -0.7
SNORA40.4-201ENST00000390971 A0A0A0MRY4 1105 aa10.68□□□□□ -0.7
SNORA40.4-201ENST00000390971 PLCB3Q01970 1234 aa10.68□□□□□ -0.7
SNORA40.4-201ENST00000390971 SND1Q7KZF4 910 aaKnown RBP eCLIP10.68□□□□□ -0.7
SNORA40.4-201ENST00000390971 POP1Q99575 1024 aaKnown RBP10.68□□□□□ -0.7
SNORA40.4-201ENST00000390971 OSMRQ99650 979 aa10.68□□□□□ -0.7
SNORA40.4-201ENST00000390971 FAM177BA6PVY3 158 aa10.67□□□□□ -0.7
SNORA40.4-201ENST00000390971 BAG6P46379 1132 aa10.67□□□□□ -0.7
SNORA40.4-201ENST00000390971 ORC1Q13415 861 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms