RNA–Protein interactions for RNA: ENST00000390687.8

SNRPN-202, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPN, Length 1,528 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-202ENST00000390687 DNAJC5GQ8N7S2 189 aa18.9■□□□□ 0.62
SNRPN-202ENST00000390687 EYA3Q99504 573 aa18.9■□□□□ 0.62
SNRPN-202ENST00000390687 BCL2L13Q9BXK5 485 aa18.9■□□□□ 0.62
SNRPN-202ENST00000390687 MINPP1Q9UNW1 487 aa18.9■□□□□ 0.62
SNRPN-202ENST00000390687 ALDH1L1O75891 902 aa18.9■□□□□ 0.62
SNRPN-202ENST00000390687 ITGA6P23229 1130 aa18.9■□□□□ 0.62
SNRPN-202ENST00000390687 CIAPIN1Q6FI81 312 aa18.9■□□□□ 0.62
SNRPN-202ENST00000390687 PNMA8AQ86V59 439 aaPredicted RBP18.9■□□□□ 0.62
SNRPN-202ENST00000390687 ZC3H12CQ9C0D7 883 aaKnown RBP18.9■□□□□ 0.62
SNRPN-202ENST00000390687 SRCIN1Q9C0H9 1055 aa18.9■□□□□ 0.62
SNRPN-202ENST00000390687 DBNDD1Q9H9R9 158 aa18.9■□□□□ 0.62
SNRPN-202ENST00000390687 GGA1Q9UJY5 639 aa18.9■□□□□ 0.62
SNRPN-202ENST00000390687 WTIPA6NIX2 430 aaPredicted RBP18.89■□□□□ 0.61
SNRPN-202ENST00000390687 UFL1O94874 794 aa18.89■□□□□ 0.61
SNRPN-202ENST00000390687 LMOD1P29536 600 aaPredicted RBP18.89■□□□□ 0.61
SNRPN-202ENST00000390687 TNIP1Q15025 636 aa18.89■□□□□ 0.61
SNRPN-202ENST00000390687 DOK7Q18PE1 504 aa18.89■□□□□ 0.61
SNRPN-202ENST00000390687 FAM161AQ3B820 660 aa18.89■□□□□ 0.61
SNRPN-202ENST00000390687 ALDH1L2Q3SY69 923 aa18.89■□□□□ 0.61
SNRPN-202ENST00000390687 C9orf78Q9NZ63 289 aaPredicted RBP18.89■□□□□ 0.61
SNRPN-202ENST00000390687 PTPRCP08575 1304 aa18.88■□□□□ 0.61
SNRPN-202ENST00000390687 XDHP47989 1333 aa18.88■□□□□ 0.61
SNRPN-202ENST00000390687 EPHA10Q5JZY3 1008 aa18.88■□□□□ 0.61
SNRPN-202ENST00000390687 KCNQ5Q9NR82 932 aa18.88■□□□□ 0.61
SNRPN-202ENST00000390687 GPRC5DQ9NZD1 345 aa18.88■□□□□ 0.61
SNRPN-202ENST00000390687 CLEC11AQ9Y240 323 aa18.88■□□□□ 0.61
SNRPN-202ENST00000390687 IGHMBP2P38935 993 aaKnown RBP18.87■□□□□ 0.61
SNRPN-202ENST00000390687 GMPSP49915 693 aaPredicted RBP18.87■□□□□ 0.61
SNRPN-202ENST00000390687 ECE2O60344 883 aa18.86■□□□□ 0.61
SNRPN-202ENST00000390687 CT47B1P0C2W7 299 aaPredicted RBP18.86■□□□□ 0.61
SNRPN-202ENST00000390687 ATP2B4P23634 1241 aa18.86■□□□□ 0.61
SNRPN-202ENST00000390687 ITGBL1O95965 494 aaPredicted RBP18.85■□□□□ 0.61
SNRPN-202ENST00000390687 NBPF7P0C2Y1 421 aaPredicted RBP18.85■□□□□ 0.61
SNRPN-202ENST00000390687 LMBR1LQ6UX01 489 aa18.85■□□□□ 0.61
SNRPN-202ENST00000390687 SMC4Q9NTJ3 1288 aa18.85■□□□□ 0.61
SNRPN-202ENST00000390687 ANKRD18BA2A2Z9 1011 aa18.84■□□□□ 0.61
SNRPN-202ENST00000390687 PSMD14O00487 310 aa18.84■□□□□ 0.61
SNRPN-202ENST00000390687 USP50Q70EL3 339 aaPredicted RBP18.84■□□□□ 0.61
SNRPN-202ENST00000390687 KAZALD1Q96I82 304 aa18.84■□□□□ 0.61
SNRPN-202ENST00000390687 MPHOSPH8Q99549 860 aa18.84■□□□□ 0.61
SNRPN-202ENST00000390687 ZBTB12Q9Y330 459 aaPredicted RBP18.84■□□□□ 0.61
SNRPN-202ENST00000390687 UTYO14607 1347 aa18.84■□□□□ 0.61
SNRPN-202ENST00000390687 ADAMTSL1Q8N6G6 1762 aa18.84■□□□□ 0.61
SNRPN-202ENST00000390687 CCT4P50991 539 aaKnown RBP18.84■□□□□ 0.61
SNRPN-202ENST00000390687 IFIT5Q13325 482 aaKnown RBP18.84■□□□□ 0.61
SNRPN-202ENST00000390687 MAP1SQ66K74 1059 aaPredicted RBP18.84■□□□□ 0.61
SNRPN-202ENST00000390687 CNTROBQ8N137 903 aa18.84■□□□□ 0.61
SNRPN-202ENST00000390687 ADARB2Q9NS39 739 aaKnown RBP18.84■□□□□ 0.61
SNRPN-202ENST00000390687 CHMP3Q9Y3E7 222 aa18.84■□□□□ 0.61
SNRPN-202ENST00000390687 G3V3G9 751 aa18.83■□□□□ 0.6
SNRPN-202ENST00000390687 DCAF8Q5TAQ9 597 aa18.83■□□□□ 0.6
SNRPN-202ENST00000390687 SUCLG2Q96I99 432 aa18.83■□□□□ 0.6
SNRPN-202ENST00000390687 CNOT7Q9UIV1 285 aaKnown RBP18.83■□□□□ 0.6
SNRPN-202ENST00000390687 PASKQ96RG2 1323 aa18.83■□□□□ 0.6
SNRPN-202ENST00000390687 SPEF2Q9C093 1822 aa18.83■□□□□ 0.6
SNRPN-202ENST00000390687 BRPF1P55201 1214 aaPredicted RBP18.82■□□□□ 0.6
SNRPN-202ENST00000390687 DPF2Q92785 391 aa18.82■□□□□ 0.6
SNRPN-202ENST00000390687 NOB1Q9ULX3 412 aaKnown RBP18.82■□□□□ 0.6
SNRPN-202ENST00000390687 LEMD3Q9Y2U8 911 aa18.82■□□□□ 0.6
SNRPN-202ENST00000390687 SHTN1A0MZ66 631 aa18.81■□□□□ 0.6
SNRPN-202ENST00000390687 RARSP54136 660 aaKnown RBP18.81■□□□□ 0.6
SNRPN-202ENST00000390687 HNRNPUQ00839 825 aaKnown RBP eCLIP18.81■□□□□ 0.6
SNRPN-202ENST00000390687 CCDC57Q2TAC2 916 aa18.81■□□□□ 0.6
SNRPN-202ENST00000390687 ANKRD2Q9GZV1 360 aa18.81■□□□□ 0.6
SNRPN-202ENST00000390687 USP44Q9H0E7 712 aa18.81■□□□□ 0.6
SNRPN-202ENST00000390687 VIL1P09327 827 aaKnown RBP18.8■□□□□ 0.6
SNRPN-202ENST00000390687 HIRAP54198 1017 aaPredicted RBP18.8■□□□□ 0.6
SNRPN-202ENST00000390687 CHRNDQ07001 517 aa18.8■□□□□ 0.6
SNRPN-202ENST00000390687 KLRG1Q96E93 195 aa18.8■□□□□ 0.6
SNRPN-202ENST00000390687 ZNF594Q96JF6 807 aaPredicted RBP18.8■□□□□ 0.6
SNRPN-202ENST00000390687 SCN9AQ15858 1988 aa18.8■□□□□ 0.6
SNRPN-202ENST00000390687 PODNQ7Z5L7 613 aa18.79■□□□□ 0.6
SNRPN-202ENST00000390687 TXNRD3Q86VQ6 643 aa18.79■□□□□ 0.6
SNRPN-202ENST00000390687 MICALL2Q8IY33 904 aa18.79■□□□□ 0.6
SNRPN-202ENST00000390687 ZNF804BA4D1E1 1349 aa18.79■□□□□ 0.6
SNRPN-202ENST00000390687 MED23Q9ULK4 1368 aa18.79■□□□□ 0.6
SNRPN-202ENST00000390687 H7C1D1 291 aa18.79■□□□□ 0.6
SNRPN-202ENST00000390687 RPS12P25398 132 aaKnown RBP18.79■□□□□ 0.6
SNRPN-202ENST00000390687 CREBZFQ9NS37 354 aa18.79■□□□□ 0.6
SNRPN-202ENST00000390687 SNAP23O00161 211 aa18.78■□□□□ 0.6
SNRPN-202ENST00000390687 TAF5LO75529 589 aa18.78■□□□□ 0.6
SNRPN-202ENST00000390687 LDHAL6AQ6ZMR3 332 aa18.78■□□□□ 0.6
SNRPN-202ENST00000390687 HELBQ8NG08 1087 aaPredicted RBP18.78■□□□□ 0.6
SNRPN-202ENST00000390687 TRPM4Q8TD43 1214 aa18.78■□□□□ 0.6
SNRPN-202ENST00000390687 BICC1Q9H694 974 aaKnown RBP18.78■□□□□ 0.6
SNRPN-202ENST00000390687 PGAP2Q9UHJ9 254 aa18.78■□□□□ 0.6
SNRPN-202ENST00000390687 KLRK1P26718 216 aa18.77■□□□□ 0.6
SNRPN-202ENST00000390687 RABL6Q3YEC7 729 aaPredicted RBP18.77■□□□□ 0.6
SNRPN-202ENST00000390687 FMR1Q06787 632 aaKnown RBP eCLIP18.76■□□□□ 0.59
SNRPN-202ENST00000390687 TAF7LQ5H9L4 462 aa18.76■□□□□ 0.59
SNRPN-202ENST00000390687 RSBN1LQ6PCB5 846 aaPredicted RBP18.76■□□□□ 0.59
SNRPN-202ENST00000390687 SAMD7Q7Z3H4 446 aa18.76■□□□□ 0.59
SNRPN-202ENST00000390687 ANKRD44Q8N8A2 993 aa18.76■□□□□ 0.59
SNRPN-202ENST00000390687 COA1Q9GZY4 146 aa18.76■□□□□ 0.59
SNRPN-202ENST00000390687 USP17L3A6NCW0 530 aa18.75■□□□□ 0.59
SNRPN-202ENST00000390687 USP17L4A6NCW7 530 aa18.75■□□□□ 0.59
SNRPN-202ENST00000390687 TMEM88BA6NKF7 163 aa18.75■□□□□ 0.59
SNRPN-202ENST00000390687 EGFRP00533 1210 aa18.75■□□□□ 0.59
SNRPN-202ENST00000390687 KCNJ4P48050 445 aa18.75■□□□□ 0.59
SNRPN-202ENST00000390687 USP17L1Q7RTZ2 530 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms