RNA–Protein interactions for RNA: ENST00000390439.2

TRAV13-2-201, Transcript of T cell receptor alpha variable 13-2, humanhuman

APPRIS P1 BASIC

Gene TRAV13-2, Length 410 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2-201ENST00000390439 ATP5J2-PTCD1G3V325 749 aa12.63□□□□□ -0.39
TRAV13-2-201ENST00000390439 IRS4O14654 1257 aaPredicted RBP12.63□□□□□ -0.39
TRAV13-2-201ENST00000390439 VIL1P09327 827 aaKnown RBP12.63□□□□□ -0.39
TRAV13-2-201ENST00000390439 TRIM28Q13263 835 aaKnown RBP12.63□□□□□ -0.39
TRAV13-2-201ENST00000390439 KIF4BQ2VIQ3 1234 aa12.63□□□□□ -0.39
TRAV13-2-201ENST00000390439 ANKIB1Q9P2G1 1089 aa12.63□□□□□ -0.39
TRAV13-2-201ENST00000390439 ANKRD36CQ5JPF3 1778 aa12.62□□□□□ -0.39
TRAV13-2-201ENST00000390439 ADM5C9JUS6 153 aa12.62□□□□□ -0.39
TRAV13-2-201ENST00000390439 RTL5Q5HYW3 569 aaPredicted RBP12.62□□□□□ -0.39
TRAV13-2-201ENST00000390439 DLK2Q6UY11 383 aa12.62□□□□□ -0.39
TRAV13-2-201ENST00000390439 TBC1D16Q8TBP0 767 aa12.62□□□□□ -0.39
TRAV13-2-201ENST00000390439 ZNF428Q96B54 188 aa12.62□□□□□ -0.39
TRAV13-2-201ENST00000390439 RNF186Q9NXI6 227 aa12.62□□□□□ -0.39
TRAV13-2-201ENST00000390439 GGA3Q9NZ52 723 aa12.62□□□□□ -0.39
TRAV13-2-201ENST00000390439 GGA1Q9UJY5 639 aa12.62□□□□□ -0.39
TRAV13-2-201ENST00000390439 PDE4DIPQ5VU43 2346 aa12.62□□□□□ -0.39
TRAV13-2-201ENST00000390439 UFL1O94874 794 aa12.61□□□□□ -0.39
TRAV13-2-201ENST00000390439 EGFRP00533 1210 aa12.61□□□□□ -0.39
TRAV13-2-201ENST00000390439 SLC10A3P09131 477 aa12.61□□□□□ -0.39
TRAV13-2-201ENST00000390439 FKBP1BP68106 108 aa12.61□□□□□ -0.39
TRAV13-2-201ENST00000390439 RIC3Q7Z5B4 369 aa12.61□□□□□ -0.39
TRAV13-2-201ENST00000390439 AGBL3Q8NEM8 1001 aa12.61□□□□□ -0.39
TRAV13-2-201ENST00000390439 KCNQ5Q9NR82 932 aa12.61□□□□□ -0.39
TRAV13-2-201ENST00000390439 PODXL2Q9NZ53 605 aa12.61□□□□□ -0.39
TRAV13-2-201ENST00000390439 GOLGA2Q08379 1002 aa12.6□□□□□ -0.39
TRAV13-2-201ENST00000390439 SCARF1Q14162 830 aa12.6□□□□□ -0.39
TRAV13-2-201ENST00000390439 KRT24Q2M2I5 525 aa12.6□□□□□ -0.39
TRAV13-2-201ENST00000390439 CCDC152Q4G0S7 254 aa12.6□□□□□ -0.39
TRAV13-2-201ENST00000390439 CTU1Q7Z7A3 348 aaKnown RBP12.6□□□□□ -0.39
TRAV13-2-201ENST00000390439 ZBTB38Q8NAP3 1195 aaPredicted RBP12.6□□□□□ -0.39
TRAV13-2-201ENST00000390439 RUNDC1Q96C34 613 aa12.6□□□□□ -0.39
TRAV13-2-201ENST00000390439 CDCA5Q96FF9 252 aa12.6□□□□□ -0.39
TRAV13-2-201ENST00000390439 CSRNP1Q96S65 589 aa12.6□□□□□ -0.39
TRAV13-2-201ENST00000390439 CHMP4AQ9BY43 222 aa12.6□□□□□ -0.39
TRAV13-2-201ENST00000390439 RTL9Q8NET4 1388 aa12.59□□□□□ -0.39
TRAV13-2-201ENST00000390439 ZNF280AP59817 542 aaPredicted RBP12.59□□□□□ -0.39
TRAV13-2-201ENST00000390439 WDR43Q15061 677 aaKnown RBP eCLIP12.59□□□□□ -0.39
TRAV13-2-201ENST00000390439 PKN2Q16513 984 aaKnown RBP12.59□□□□□ -0.39
TRAV13-2-201ENST00000390439 RSBN1LQ6PCB5 846 aaPredicted RBP12.59□□□□□ -0.39
TRAV13-2-201ENST00000390439 USP17L8P0C7I0 530 aa12.58□□□□□ -0.4
TRAV13-2-201ENST00000390439 SOX10P56693 466 aa12.58□□□□□ -0.4
TRAV13-2-201ENST00000390439 ANGEL2Q5VTE6 544 aaKnown RBP12.58□□□□□ -0.4
TRAV13-2-201ENST00000390439 DUSP27Q5VZP5 1158 aa12.58□□□□□ -0.4
TRAV13-2-201ENST00000390439 CCDC146Q8IYE0 955 aa12.58□□□□□ -0.4
TRAV13-2-201ENST00000390439 HDAC9Q9UKV0 1011 aa12.58□□□□□ -0.4
TRAV13-2-201ENST00000390439 DUOX1Q9NRD9 1551 aa12.57□□□□□ -0.4
TRAV13-2-201ENST00000390439 LAMB2P55268 1798 aa12.57□□□□□ -0.4
TRAV13-2-201ENST00000390439 PDE8AO60658 829 aa12.57□□□□□ -0.4
TRAV13-2-201ENST00000390439 ATP2B4P23634 1241 aa12.57□□□□□ -0.4
TRAV13-2-201ENST00000390439 PODNQ7Z5L7 613 aa12.57□□□□□ -0.4
TRAV13-2-201ENST00000390439 ANKRD18AQ8IVF6 992 aa12.57□□□□□ -0.4
TRAV13-2-201ENST00000390439 CCDC191Q8NCU4 936 aa12.57□□□□□ -0.4
TRAV13-2-201ENST00000390439 SEC31BQ9NQW1 1179 aa12.57□□□□□ -0.4
TRAV13-2-201ENST00000390439 TRIM35Q9UPQ4 493 aa12.57□□□□□ -0.4
TRAV13-2-201ENST00000390439 XDHP47989 1333 aa12.57□□□□□ -0.4
TRAV13-2-201ENST00000390439 PITPNM2Q9BZ72 1349 aa12.57□□□□□ -0.4
TRAV13-2-201ENST00000390439 USP17L3A6NCW0 530 aa12.56□□□□□ -0.4
TRAV13-2-201ENST00000390439 USP17L4A6NCW7 530 aa12.56□□□□□ -0.4
TRAV13-2-201ENST00000390439 DDX58O95786 925 aaKnown RBP12.56□□□□□ -0.4
TRAV13-2-201ENST00000390439 PCCAP05165 728 aaPredicted RBP12.56□□□□□ -0.4
TRAV13-2-201ENST00000390439 NF2P35240 595 aa12.56□□□□□ -0.4
TRAV13-2-201ENST00000390439 CALD1Q05682 793 aaKnown RBP12.56□□□□□ -0.4
TRAV13-2-201ENST00000390439 TTLL12Q14166 644 aaPredicted RBP12.56□□□□□ -0.4
TRAV13-2-201ENST00000390439 USP17L1Q7RTZ2 530 aa12.56□□□□□ -0.4
TRAV13-2-201ENST00000390439 RASAL3Q86YV0 1011 aa12.56□□□□□ -0.4
TRAV13-2-201ENST00000390439 OGFOD1Q8N543 542 aa12.56□□□□□ -0.4
TRAV13-2-201ENST00000390439 MYOZ2Q9NPC6 264 aa12.56□□□□□ -0.4
TRAV13-2-201ENST00000390439 POLR2AP24928 1970 aaKnown RBP12.56□□□□□ -0.4
TRAV13-2-201ENST00000390439 LRRC37AA6NMS7 1700 aa12.55□□□□□ -0.4
TRAV13-2-201ENST00000390439 MMP14P50281 582 aa12.55□□□□□ -0.4
TRAV13-2-201ENST00000390439 CDC5LQ99459 802 aaKnown RBP12.55□□□□□ -0.4
TRAV13-2-201ENST00000390439 MYD88Q99836 296 aa12.55□□□□□ -0.4
TRAV13-2-201ENST00000390439 CWC25Q9NXE8 425 aaPredicted RBP12.55□□□□□ -0.4
TRAV13-2-201ENST00000390439 ASTN2O75129 1339 aaPredicted RBP12.55□□□□□ -0.4
TRAV13-2-201ENST00000390439 MYBBP1AQ9BQG0 1328 aaKnown RBP12.55□□□□□ -0.4
TRAV13-2-201ENST00000390439 TAF1P21675 1872 aa12.55□□□□□ -0.4
TRAV13-2-201ENST00000390439 PRPF38BQ5VTL8 546 aaKnown RBP12.54□□□□□ -0.4
TRAV13-2-201ENST00000390439 GMLQ99445 158 aa12.54□□□□□ -0.4
TRAV13-2-201ENST00000390439 ZNF609O15014 1411 aa12.54□□□□□ -0.4
TRAV13-2-201ENST00000390439 AKAP11Q9UKA4 1901 aa12.53□□□□□ -0.4
TRAV13-2-201ENST00000390439 UBE2Q2LH0YL09 131 aa12.53□□□□□ -0.4
TRAV13-2-201ENST00000390439 CCDC85AQ96PX6 553 aaPredicted RBP12.53□□□□□ -0.4
TRAV13-2-201ENST00000390439 MBIPQ9NS73 344 aa12.53□□□□□ -0.4
TRAV13-2-201ENST00000390439 HPS5Q9UPZ3 1129 aa12.53□□□□□ -0.4
TRAV13-2-201ENST00000390439 TBC1D8O95759 1140 aa12.52□□□□□ -0.41
TRAV13-2-201ENST00000390439 GNAI1P63096 354 aa12.52□□□□□ -0.41
TRAV13-2-201ENST00000390439 SREBF2Q12772 1141 aa12.52□□□□□ -0.41
TRAV13-2-201ENST00000390439 CCDC30Q5VVM6 783 aa12.52□□□□□ -0.41
TRAV13-2-201ENST00000390439 ARMC9Q7Z3E5 817 aa12.52□□□□□ -0.41
TRAV13-2-201ENST00000390439 FBXW7Q969H0 707 aa12.52□□□□□ -0.41
TRAV13-2-201ENST00000390439 METTL22Q9BUU2 404 aaPredicted RBP12.52□□□□□ -0.41
TRAV13-2-201ENST00000390439 PHAXQ9H814 394 aaKnown RBP12.52□□□□□ -0.41
TRAV13-2-201ENST00000390439 ADAMTS8Q9UP79 889 aa12.52□□□□□ -0.41
TRAV13-2-201ENST00000390439 MYO3BQ8WXR4 1341 aa12.52□□□□□ -0.41
TRAV13-2-201ENST00000390439 DDX60Q8IY21 1712 aaKnown RBP12.51□□□□□ -0.41
TRAV13-2-201ENST00000390439 ELL2O00472 640 aaPredicted RBP12.51□□□□□ -0.41
TRAV13-2-201ENST00000390439 TM4SF4P48230 202 aa12.51□□□□□ -0.41
TRAV13-2-201ENST00000390439 NOM1Q5C9Z4 860 aaKnown RBP12.51□□□□□ -0.41
TRAV13-2-201ENST00000390439 ZNF296Q8WUU4 475 aaPredicted RBP12.51□□□□□ -0.41
TRAV13-2-201ENST00000390439 COA1Q9GZY4 146 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms