RNA–Protein interactions for RNA: ENST00000390428.3

TRAV6-201, Transcript of T cell receptor alpha variable 6, humanhuman

APPRIS P1 BASIC

Gene TRAV6, Length 404 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6-201ENST00000390428 SNRPA1P09661 255 aaKnown RBP10.26□□□□□ -0.77
TRAV6-201ENST00000390428 PPP2R1AP30153 589 aa10.26□□□□□ -0.77
TRAV6-201ENST00000390428 CLEC4GQ6UXB4 293 aa10.26□□□□□ -0.77
TRAV6-201ENST00000390428 MCM10Q7L590 875 aa10.26□□□□□ -0.77
TRAV6-201ENST00000390428 MASTLQ96GX5 879 aa10.26□□□□□ -0.77
TRAV6-201ENST00000390428 TAOK3Q9H2K8 898 aa10.26□□□□□ -0.77
TRAV6-201ENST00000390428 LAMB4A4D0S4 1761 aa10.26□□□□□ -0.77
TRAV6-201ENST00000390428 DCTN1Q14203 1278 aa10.25□□□□□ -0.77
TRAV6-201ENST00000390428 SOGA3Q5TF21 947 aa10.25□□□□□ -0.77
TRAV6-201ENST00000390428 PRPF40BQ6NWY9 871 aaKnown RBP10.25□□□□□ -0.77
TRAV6-201ENST00000390428 NYAP1Q6ZVC0 841 aa10.25□□□□□ -0.77
TRAV6-201ENST00000390428 ZNF652Q9Y2D9 606 aa10.25□□□□□ -0.77
TRAV6-201ENST00000390428 SCN4AP35499 1836 aa10.25□□□□□ -0.77
TRAV6-201ENST00000390428 NUP98P52948 1817 aa10.25□□□□□ -0.77
TRAV6-201ENST00000390428 HTATSF1O43719 755 aaKnown RBP10.24□□□□□ -0.77
TRAV6-201ENST00000390428 COL13A1Q5TAT6 717 aaPredicted RBP10.24□□□□□ -0.77
TRAV6-201ENST00000390428 NBPF10Q6P3W6 841 aaKnown RBP10.24□□□□□ -0.77
TRAV6-201ENST00000390428 NBPF5PQ86XG9 351 aaPredicted RBP10.24□□□□□ -0.77
TRAV6-201ENST00000390428 NBPF15Q8N660 670 aa10.24□□□□□ -0.77
TRAV6-201ENST00000390428 C7orf43Q8WVR3 580 aa10.24□□□□□ -0.77
TRAV6-201ENST00000390428 KLRG2A4D1S0 409 aaPredicted RBP10.23□□□□□ -0.77
TRAV6-201ENST00000390428 DDNO94850 711 aaPredicted RBP10.23□□□□□ -0.77
TRAV6-201ENST00000390428 NPR1P16066 1061 aa10.23□□□□□ -0.77
TRAV6-201ENST00000390428 TAF7Q15545 349 aaPredicted RBP10.23□□□□□ -0.77
TRAV6-201ENST00000390428 TPTE2Q6XPS3 522 aa10.23□□□□□ -0.77
TRAV6-201ENST00000390428 NIP7Q9Y221 180 aaKnown RBP eCLIP10.23□□□□□ -0.77
TRAV6-201ENST00000390428 ADGRG1Q9Y653 693 aa10.23□□□□□ -0.77
TRAV6-201ENST00000390428 KDM3BQ7LBC6 1761 aa10.23□□□□□ -0.77
TRAV6-201ENST00000390428 GPR37O15354 613 aa10.22□□□□□ -0.77
TRAV6-201ENST00000390428 PPP4CP60510 307 aa10.22□□□□□ -0.77
TRAV6-201ENST00000390428 HIC1Q14526 733 aa10.22□□□□□ -0.77
TRAV6-201ENST00000390428 CCDC93Q567U6 631 aa10.22□□□□□ -0.77
TRAV6-201ENST00000390428 HLFQ16534 295 aa10.21□□□□□ -0.77
TRAV6-201ENST00000390428 FAM161AQ3B820 660 aa10.21□□□□□ -0.77
TRAV6-201ENST00000390428 SWT1Q5T5J6 900 aaKnown RBP10.21□□□□□ -0.77
TRAV6-201ENST00000390428 MIS18AQ9NYP9 233 aa10.21□□□□□ -0.77
TRAV6-201ENST00000390428 FAM177BA6PVY3 158 aa10.2□□□□□ -0.78
TRAV6-201ENST00000390428 HSPA1AP0DMV8 641 aaKnown RBP10.2□□□□□ -0.78
TRAV6-201ENST00000390428 HSPA1BP0DMV9 641 aaKnown RBP10.2□□□□□ -0.78
TRAV6-201ENST00000390428 FKBP4Q02790 459 aaKnown RBP eCLIP10.2□□□□□ -0.78
TRAV6-201ENST00000390428 IQCA1LA6NCM1 817 aa10.19□□□□□ -0.78
TRAV6-201ENST00000390428 ITGBL1O95965 494 aaPredicted RBP10.19□□□□□ -0.78
TRAV6-201ENST00000390428 NEFMP07197 916 aa10.19□□□□□ -0.78
TRAV6-201ENST00000390428 FECHP22830 423 aa10.19□□□□□ -0.78
TRAV6-201ENST00000390428 GTF2E1P29083 439 aaPredicted RBP10.19□□□□□ -0.78
TRAV6-201ENST00000390428 ALDH1B1P30837 517 aa10.19□□□□□ -0.78
TRAV6-201ENST00000390428 OLFM4Q6UX06 510 aa10.19□□□□□ -0.78
TRAV6-201ENST00000390428 RTKN2Q8IZC4 609 aa10.19□□□□□ -0.78
TRAV6-201ENST00000390428 PNISRQ8TF01 805 aaKnown RBP10.19□□□□□ -0.78
TRAV6-201ENST00000390428 TAF1DQ9H5J8 278 aaPredicted RBP10.19□□□□□ -0.78
TRAV6-201ENST00000390428 ZNF277Q9NRM2 450 aaPredicted RBP10.19□□□□□ -0.78
TRAV6-201ENST00000390428 MAP3K15Q6ZN16 1313 aa10.18□□□□□ -0.78
TRAV6-201ENST00000390428 ZNF541Q9H0D2 1346 aa10.18□□□□□ -0.78
TRAV6-201ENST00000390428 ERVV-1B6SEH8 477 aa10.18□□□□□ -0.78
TRAV6-201ENST00000390428 CRY2Q49AN0 593 aa10.18□□□□□ -0.78
TRAV6-201ENST00000390428 LDHDQ86WU2 507 aa10.18□□□□□ -0.78
TRAV6-201ENST00000390428 TNS4Q8IZW8 715 aa10.18□□□□□ -0.78
TRAV6-201ENST00000390428 NGEFQ8N5V2 710 aa10.18□□□□□ -0.78
TRAV6-201ENST00000390428 PLEKHF1Q96S99 279 aa10.18□□□□□ -0.78
TRAV6-201ENST00000390428 ADAMTSL1Q8N6G6 1762 aa10.18□□□□□ -0.78
TRAV6-201ENST00000390428 SNED1Q8TER0 1413 aa10.17□□□□□ -0.78
TRAV6-201ENST00000390428 ABCC12Q96J65 1359 aa10.17□□□□□ -0.78
TRAV6-201ENST00000390428 PASKQ96RG2 1323 aa10.17□□□□□ -0.78
TRAV6-201ENST00000390428 DNAJB2P25686 324 aa10.17□□□□□ -0.78
TRAV6-201ENST00000390428 IARSP41252 1262 aaKnown RBP10.17□□□□□ -0.78
TRAV6-201ENST00000390428 EIF4A1P60842 406 aaKnown RBP10.17□□□□□ -0.78
TRAV6-201ENST00000390428 NUTM1Q86Y26 1132 aa10.17□□□□□ -0.78
TRAV6-201ENST00000390428 NYXQ9GZU5 481 aa10.17□□□□□ -0.78
TRAV6-201ENST00000390428 MKRN1Q9UHC7 482 aaKnown RBP10.17□□□□□ -0.78
TRAV6-201ENST00000390428 PCNTO95613 3336 aa10.16□□□□□ -0.78
TRAV6-201ENST00000390428 FZD9O00144 591 aa10.16□□□□□ -0.78
TRAV6-201ENST00000390428 RNF40O75150 1001 aa10.16□□□□□ -0.78
TRAV6-201ENST00000390428 MYL6BP14649 208 aa10.16□□□□□ -0.78
TRAV6-201ENST00000390428 EPHX2P34913 555 aa10.16□□□□□ -0.78
TRAV6-201ENST00000390428 NFE2L2Q16236 605 aa10.16□□□□□ -0.78
TRAV6-201ENST00000390428 KIF6Q6ZMV9 814 aa10.16□□□□□ -0.78
TRAV6-201ENST00000390428 TTLL7Q6ZT98 887 aa10.16□□□□□ -0.78
TRAV6-201ENST00000390428 SYNE4Q8N205 404 aa10.16□□□□□ -0.78
TRAV6-201ENST00000390428 THUMPD2Q9BTF0 503 aaKnown RBP10.16□□□□□ -0.78
TRAV6-201ENST00000390428 HACL1Q9UJ83 578 aa10.16□□□□□ -0.78
TRAV6-201ENST00000390428 RRP7AQ9Y3A4 280 aaKnown RBP10.16□□□□□ -0.78
TRAV6-201ENST00000390428 RIC1Q4ADV7 1423 aa10.16□□□□□ -0.78
TRAV6-201ENST00000390428 CNTNAP1P78357 1384 aa10.15□□□□□ -0.78
TRAV6-201ENST00000390428 IBTKQ9P2D0 1353 aaPredicted RBP10.15□□□□□ -0.78
TRAV6-201ENST00000390428 UBN2Q6ZU65 1347 aa10.15□□□□□ -0.78
TRAV6-201ENST00000390428 RCCD1A6NED2 376 aa10.15□□□□□ -0.78
TRAV6-201ENST00000390428 GPTP24298 496 aa10.15□□□□□ -0.78
TRAV6-201ENST00000390428 HOXA10P31260 410 aaPredicted RBP10.15□□□□□ -0.78
TRAV6-201ENST00000390428 EAPPQ56P03 285 aaPredicted RBP10.15□□□□□ -0.78
TRAV6-201ENST00000390428 CC2D2BQ6DHV5 1058 aa10.15□□□□□ -0.78
TRAV6-201ENST00000390428 GPIHBP1Q8IV16 184 aa10.15□□□□□ -0.78
TRAV6-201ENST00000390428 SLF2Q8IX21 1173 aa10.15□□□□□ -0.78
TRAV6-201ENST00000390428 PXYLP1Q8TE99 480 aa10.15□□□□□ -0.78
TRAV6-201ENST00000390428 PSMD1Q99460 953 aa10.15□□□□□ -0.78
TRAV6-201ENST00000390428 ZBTB3Q9H5J0 574 aa10.15□□□□□ -0.78
TRAV6-201ENST00000390428 TMEM134Q9H6X4 195 aa10.15□□□□□ -0.78
TRAV6-201ENST00000390428 ERBB4Q15303 1308 aa10.14□□□□□ -0.79
TRAV6-201ENST00000390428 RNF123Q5XPI4 1314 aa10.14□□□□□ -0.79
TRAV6-201ENST00000390428 TMEM88BA6NKF7 163 aa10.14□□□□□ -0.79
TRAV6-201ENST00000390428 SUSD4Q5VX71 490 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms