RNA–Protein interactions for RNA: ENST00000390426.2

TRAV4-201, Transcript of T cell receptor alpha variable 4, humanhuman

APPRIS P1 BASIC

Gene TRAV4, Length 395 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4-201ENST00000390426 STK31Q9BXU1 1019 aa13.77□□□□□ -0.21
TRAV4-201ENST00000390426 ZC3H12CQ9C0D7 883 aaKnown RBP13.77□□□□□ -0.21
TRAV4-201ENST00000390426 MRS2Q9HD23 443 aa13.77□□□□□ -0.21
TRAV4-201ENST00000390426 PGAP2Q9UHJ9 254 aa13.77□□□□□ -0.21
TRAV4-201ENST00000390426 G3V3G9 751 aa13.76□□□□□ -0.21
TRAV4-201ENST00000390426 UFL1O94874 794 aa13.76□□□□□ -0.21
TRAV4-201ENST00000390426 CELF2O95319 508 aaKnown RBP13.76□□□□□ -0.21
TRAV4-201ENST00000390426 IGKV5-2P06315 115 aa13.76□□□□□ -0.21
TRAV4-201ENST00000390426 CTCFP49711 727 aaPredicted RBP13.76□□□□□ -0.21
TRAV4-201ENST00000390426 DCAF8Q5TAQ9 597 aa13.76□□□□□ -0.21
TRAV4-201ENST00000390426 G2E3Q7L622 706 aa13.76□□□□□ -0.21
TRAV4-201ENST00000390426 SAMD7Q7Z3H4 446 aa13.76□□□□□ -0.21
TRAV4-201ENST00000390426 ZC3H15Q8WU90 426 aaKnown RBP13.76□□□□□ -0.21
TRAV4-201ENST00000390426 DPF2Q92785 391 aa13.76□□□□□ -0.21
TRAV4-201ENST00000390426 CAPNS2Q96L46 248 aa13.76□□□□□ -0.21
TRAV4-201ENST00000390426 ZNF408Q9H9D4 720 aa13.76□□□□□ -0.21
TRAV4-201ENST00000390426 ANKIB1Q9P2G1 1089 aa13.76□□□□□ -0.21
TRAV4-201ENST00000390426 SALL2Q9Y467 1007 aaPredicted RBP13.76□□□□□ -0.21
TRAV4-201ENST00000390426 TLL2Q9Y6L7 1015 aa13.76□□□□□ -0.21
TRAV4-201ENST00000390426 SLC4A2P04920 1241 aa13.75□□□□□ -0.21
TRAV4-201ENST00000390426 LBX1P52954 281 aa13.75□□□□□ -0.21
TRAV4-201ENST00000390426 TBC1D10BQ4KMP7 808 aaPredicted RBP13.75□□□□□ -0.21
TRAV4-201ENST00000390426 RBM26Q5T8P6 1007 aaKnown RBP13.75□□□□□ -0.21
TRAV4-201ENST00000390426 CDC37L1Q7L3B6 337 aa13.75□□□□□ -0.21
TRAV4-201ENST00000390426 ANKRD18AQ8IVF6 992 aa13.75□□□□□ -0.21
TRAV4-201ENST00000390426 PODXL2Q9NZ53 605 aa13.75□□□□□ -0.21
TRAV4-201ENST00000390426 GGA1Q9UJY5 639 aa13.75□□□□□ -0.21
TRAV4-201ENST00000390426 RTL9Q8NET4 1388 aa13.74□□□□□ -0.21
TRAV4-201ENST00000390426 ANP32CO43423 234 aa13.74□□□□□ -0.21
TRAV4-201ENST00000390426 ZEB1P37275 1124 aaPredicted RBP13.74□□□□□ -0.21
TRAV4-201ENST00000390426 ECE1P42892 770 aa13.74□□□□□ -0.21
TRAV4-201ENST00000390426 CTSWP56202 376 aa13.74□□□□□ -0.21
TRAV4-201ENST00000390426 NEXNQ0ZGT2 675 aa13.74□□□□□ -0.21
TRAV4-201ENST00000390426 CWF19L2Q2TBE0 894 aaKnown RBP13.74□□□□□ -0.21
TRAV4-201ENST00000390426 DLK2Q6UY11 383 aa13.74□□□□□ -0.21
TRAV4-201ENST00000390426 USP48Q86UV5 1035 aa13.74□□□□□ -0.21
TRAV4-201ENST00000390426 PRDM10Q9NQV6 1147 aa13.74□□□□□ -0.21
TRAV4-201ENST00000390426 IL16Q14005 1332 aa13.73□□□□□ -0.21
TRAV4-201ENST00000390426 ZNF316A6NFI3 1004 aaPredicted RBP13.73□□□□□ -0.21
TRAV4-201ENST00000390426 AOC2O75106 756 aa13.73□□□□□ -0.21
TRAV4-201ENST00000390426 EGFRP00533 1210 aa13.73□□□□□ -0.21
TRAV4-201ENST00000390426 RPS12P25398 132 aaKnown RBP13.73□□□□□ -0.21
TRAV4-201ENST00000390426 MAP2K1Q02750 393 aaPredicted RBP13.73□□□□□ -0.21
TRAV4-201ENST00000390426 NEURL1BA8MQ27 555 aa13.72□□□□□ -0.21
TRAV4-201ENST00000390426 VIL1P09327 827 aaKnown RBP13.72□□□□□ -0.21
TRAV4-201ENST00000390426 HSPA8P11142 646 aaKnown RBP13.72□□□□□ -0.21
TRAV4-201ENST00000390426 UBE3BQ7Z3V4 1068 aa13.72□□□□□ -0.21
TRAV4-201ENST00000390426 SAPCD2Q86UD0 394 aa13.72□□□□□ -0.21
TRAV4-201ENST00000390426 TTLL11Q8NHH1 800 aa13.72□□□□□ -0.21
TRAV4-201ENST00000390426 CDC5LQ99459 802 aaKnown RBP13.72□□□□□ -0.21
TRAV4-201ENST00000390426 XDHP47989 1333 aa13.71□□□□□ -0.21
TRAV4-201ENST00000390426 FANCIQ9NVI1 1328 aa13.71□□□□□ -0.21
TRAV4-201ENST00000390426 WTIPA6NIX2 430 aaPredicted RBP13.71□□□□□ -0.21
TRAV4-201ENST00000390426 H7C1W4 665 aa13.71□□□□□ -0.21
TRAV4-201ENST00000390426 ATP2B4P23634 1241 aa13.71□□□□□ -0.21
TRAV4-201ENST00000390426 FLIIQ13045 1269 aa13.71□□□□□ -0.21
TRAV4-201ENST00000390426 GREM2Q9H772 168 aa13.71□□□□□ -0.21
TRAV4-201ENST00000390426 TRPM7Q96QT4 1865 aa13.71□□□□□ -0.21
TRAV4-201ENST00000390426 EXOSC9Q06265 439 aaKnown RBP13.7□□□□□ -0.22
TRAV4-201ENST00000390426 FKBP5Q13451 457 aaPredicted RBP13.7□□□□□ -0.22
TRAV4-201ENST00000390426 KIF4BQ2VIQ3 1234 aa13.7□□□□□ -0.22
TRAV4-201ENST00000390426 NCBP3Q53F19 620 aaKnown RBP13.7□□□□□ -0.22
TRAV4-201ENST00000390426 KRT26Q7Z3Y9 468 aa13.7□□□□□ -0.22
TRAV4-201ENST00000390426 MINPP1Q9UNW1 487 aa13.7□□□□□ -0.22
TRAV4-201ENST00000390426 PCNTO95613 3336 aa13.69□□□□□ -0.22
TRAV4-201ENST00000390426 ADM5C9JUS6 153 aa13.69□□□□□ -0.22
TRAV4-201ENST00000390426 VAMP4O75379 141 aa13.69□□□□□ -0.22
TRAV4-201ENST00000390426 MAP2K2P36507 400 aa13.69□□□□□ -0.22
TRAV4-201ENST00000390426 GCKRQ14397 625 aa13.69□□□□□ -0.22
TRAV4-201ENST00000390426 RSBN1LQ6PCB5 846 aaPredicted RBP13.69□□□□□ -0.22
TRAV4-201ENST00000390426 WDR63Q8IWG1 891 aa13.69□□□□□ -0.22
TRAV4-201ENST00000390426 DNAAF4Q8WXU2 420 aa13.69□□□□□ -0.22
TRAV4-201ENST00000390426 DCPSQ96C86 337 aaKnown RBP13.69□□□□□ -0.22
TRAV4-201ENST00000390426 BEGAINQ9BUH8 593 aa13.69□□□□□ -0.22
TRAV4-201ENST00000390426 BSDC1Q9NW68 430 aaPredicted RBP13.69□□□□□ -0.22
TRAV4-201ENST00000390426 ASTN2O75129 1339 aaPredicted RBP13.68□□□□□ -0.22
TRAV4-201ENST00000390426 HHIPL1Q96JK4 782 aa13.68□□□□□ -0.22
TRAV4-201ENST00000390426 GGA3Q9NZ52 723 aa13.68□□□□□ -0.22
TRAV4-201ENST00000390426 IGHMBP2P38935 993 aaKnown RBP13.67□□□□□ -0.22
TRAV4-201ENST00000390426 CCT4P50991 539 aaKnown RBP13.67□□□□□ -0.22
TRAV4-201ENST00000390426 HUNKP57058 714 aa13.67□□□□□ -0.22
TRAV4-201ENST00000390426 AGBL3Q8NEM8 1001 aa13.67□□□□□ -0.22
TRAV4-201ENST00000390426 LINS1Q8NG48 757 aa13.67□□□□□ -0.22
TRAV4-201ENST00000390426 MYH16Q9H6N6 1097 aa13.67□□□□□ -0.22
TRAV4-201ENST00000390426 SPINK5Q9NQ38 1064 aaPredicted RBP13.67□□□□□ -0.22
TRAV4-201ENST00000390426 TSKSQ9UJT2 592 aa13.67□□□□□ -0.22
TRAV4-201ENST00000390426 SCN9AQ15858 1988 aa13.67□□□□□ -0.22
TRAV4-201ENST00000390426 USP17L3A6NCW0 530 aa13.66□□□□□ -0.22
TRAV4-201ENST00000390426 USP17L4A6NCW7 530 aa13.66□□□□□ -0.22
TRAV4-201ENST00000390426 ITGA6P23229 1130 aa13.66□□□□□ -0.22
TRAV4-201ENST00000390426 CASP7P55210 303 aa13.66□□□□□ -0.22
TRAV4-201ENST00000390426 ZNF280AP59817 542 aaPredicted RBP13.66□□□□□ -0.22
TRAV4-201ENST00000390426 FAM161AQ3B820 660 aa13.66□□□□□ -0.22
TRAV4-201ENST00000390426 USP17L1Q7RTZ2 530 aa13.66□□□□□ -0.22
TRAV4-201ENST00000390426 PODNQ7Z5L7 613 aa13.66□□□□□ -0.22
TRAV4-201ENST00000390426 SULF1Q8IWU6 871 aa13.66□□□□□ -0.22
TRAV4-201ENST00000390426 FAM9BQ8IZU0 186 aa13.66□□□□□ -0.22
TRAV4-201ENST00000390426 C2orf69Q8N8R5 385 aa13.66□□□□□ -0.22
TRAV4-201ENST00000390426 GMLQ99445 158 aa13.66□□□□□ -0.22
TRAV4-201ENST00000390426 PLA2G12BQ9BX93 195 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms