RNA–Protein interactions for RNA: ENST00000390394.3

TRBV20-1-201, Transcript of T cell receptor beta variable 20-1, humanhuman

APPRIS P1 BASIC

Gene TRBV20-1, Length 413 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1-201ENST00000390394 CCDC93Q567U6 631 aa11.98□□□□□ -0.49
TRBV20-1-201ENST00000390394 SUPT20HQ8NEM7 779 aa11.98□□□□□ -0.49
TRBV20-1-201ENST00000390394 ZBTB47Q9UFB7 747 aaPredicted RBP11.98□□□□□ -0.49
TRBV20-1-201ENST00000390394 RAB11FIP3O75154 756 aa11.97□□□□□ -0.49
TRBV20-1-201ENST00000390394 SURF6O75683 361 aaKnown RBP11.97□□□□□ -0.49
TRBV20-1-201ENST00000390394 RFX5P48382 616 aaPredicted RBP11.97□□□□□ -0.49
TRBV20-1-201ENST00000390394 HDAC1Q13547 482 aaPredicted RBP11.97□□□□□ -0.49
TRBV20-1-201ENST00000390394 ANKIB1Q9P2G1 1089 aa11.97□□□□□ -0.49
TRBV20-1-201ENST00000390394 AKAP2Q9Y2D5 859 aa11.97□□□□□ -0.49
TRBV20-1-201ENST00000390394 NOP58Q9Y2X3 529 aaKnown RBP11.97□□□□□ -0.49
TRBV20-1-201ENST00000390394 XDHP47989 1333 aa11.96□□□□□ -0.49
TRBV20-1-201ENST00000390394 METTL24Q5JXM2 366 aa11.96□□□□□ -0.49
TRBV20-1-201ENST00000390394 MPNDQ8N594 471 aa11.96□□□□□ -0.49
TRBV20-1-201ENST00000390394 GCC1Q96CN9 775 aa11.96□□□□□ -0.49
TRBV20-1-201ENST00000390394 VPS33BQ9H267 617 aa11.96□□□□□ -0.49
TRBV20-1-201ENST00000390394 PODXL2Q9NZ53 605 aa11.96□□□□□ -0.49
TRBV20-1-201ENST00000390394 CEP126Q9P2H0 1117 aa11.96□□□□□ -0.49
TRBV20-1-201ENST00000390394 MINPP1Q9UNW1 487 aa11.96□□□□□ -0.49
TRBV20-1-201ENST00000390394 LEMD3Q9Y2U8 911 aa11.96□□□□□ -0.49
TRBV20-1-201ENST00000390394 COL11A2P13942 1736 aaPredicted RBP11.96□□□□□ -0.49
TRBV20-1-201ENST00000390394 C21orf2O43822 256 aa11.95□□□□□ -0.5
TRBV20-1-201ENST00000390394 HSPA6P17066 643 aa11.95□□□□□ -0.5
TRBV20-1-201ENST00000390394 ATP2B4P23634 1241 aa11.95□□□□□ -0.5
TRBV20-1-201ENST00000390394 KCNJ4P48050 445 aa11.95□□□□□ -0.5
TRBV20-1-201ENST00000390394 DPP8Q6V1X1 898 aaPredicted RBP11.95□□□□□ -0.5
TRBV20-1-201ENST00000390394 PELP1Q8IZL8 1130 aaKnown RBP11.95□□□□□ -0.5
TRBV20-1-201ENST00000390394 ZNF594Q96JF6 807 aaPredicted RBP11.95□□□□□ -0.5
TRBV20-1-201ENST00000390394 EYA3Q99504 573 aa11.95□□□□□ -0.5
TRBV20-1-201ENST00000390394 SIL1Q9H173 461 aa11.95□□□□□ -0.5
TRBV20-1-201ENST00000390394 NSFL1CQ9UNZ2 370 aaKnown RBP11.95□□□□□ -0.5
TRBV20-1-201ENST00000390394 RIPOR2Q9Y4F9 1068 aa11.95□□□□□ -0.5
TRBV20-1-201ENST00000390394 PCDHB15Q9Y5E8 787 aa11.95□□□□□ -0.5
TRBV20-1-201ENST00000390394 PDE8BO95263 885 aa11.94□□□□□ -0.5
TRBV20-1-201ENST00000390394 CHRNDQ07001 517 aa11.94□□□□□ -0.5
TRBV20-1-201ENST00000390394 C7orf43Q8WVR3 580 aa11.94□□□□□ -0.5
TRBV20-1-201ENST00000390394 KIF1BPQ96EK5 621 aa11.94□□□□□ -0.5
TRBV20-1-201ENST00000390394 PSMD1Q99460 953 aa11.94□□□□□ -0.5
TRBV20-1-201ENST00000390394 DCTPP1Q9H773 170 aa11.94□□□□□ -0.5
TRBV20-1-201ENST00000390394 GGA1Q9UJY5 639 aa11.94□□□□□ -0.5
TRBV20-1-201ENST00000390394 KIAA1551Q9HCM1 1747 aa11.94□□□□□ -0.5
TRBV20-1-201ENST00000390394 IFIT1P09914 478 aaKnown RBP11.93□□□□□ -0.5
TRBV20-1-201ENST00000390394 UBE4AQ14139 1066 aa11.93□□□□□ -0.5
TRBV20-1-201ENST00000390394 PUM3Q15397 648 aaKnown RBP11.93□□□□□ -0.5
TRBV20-1-201ENST00000390394 SIRT2Q8IXJ6 389 aa11.93□□□□□ -0.5
TRBV20-1-201ENST00000390394 CLASRPQ8N2M8 674 aaKnown RBP11.93□□□□□ -0.5
TRBV20-1-201ENST00000390394 KLHDC4Q8TBB5 520 aa11.93□□□□□ -0.5
TRBV20-1-201ENST00000390394 TAOK3Q9H2K8 898 aa11.93□□□□□ -0.5
TRBV20-1-201ENST00000390394 GPR108Q9NPR9 543 aa11.93□□□□□ -0.5
TRBV20-1-201ENST00000390394 ZNF219Q9P2Y4 722 aaPredicted RBP11.93□□□□□ -0.5
TRBV20-1-201ENST00000390394 PA2G4Q9UQ80 394 aaKnown RBP11.93□□□□□ -0.5
TRBV20-1-201ENST00000390394 BRCA1P38398 1863 aaKnown RBP11.93□□□□□ -0.5
TRBV20-1-201ENST00000390394 LTBP3Q9NS15 1303 aa11.92□□□□□ -0.5
TRBV20-1-201ENST00000390394 C6orf229H3BNL8 230 aa11.92□□□□□ -0.5
TRBV20-1-201ENST00000390394 SLC5A1P13866 664 aa11.92□□□□□ -0.5
TRBV20-1-201ENST00000390394 FKBP4Q02790 459 aaKnown RBP eCLIP11.92□□□□□ -0.5
TRBV20-1-201ENST00000390394 LRRC24Q50LG9 513 aa11.92□□□□□ -0.5
TRBV20-1-201ENST00000390394 ATG9AQ7Z3C6 839 aa11.92□□□□□ -0.5
TRBV20-1-201ENST00000390394 CCDC136Q96JN2 1154 aa11.92□□□□□ -0.5
TRBV20-1-201ENST00000390394 RTFDC1Q9BY42 306 aaPredicted RBP11.92□□□□□ -0.5
TRBV20-1-201ENST00000390394 PUS3Q9BZE2 481 aaKnown RBP11.92□□□□□ -0.5
TRBV20-1-201ENST00000390394 LRRCC1Q9C099 1032 aa11.92□□□□□ -0.5
TRBV20-1-201ENST00000390394 ZC3H12CQ9C0D7 883 aaKnown RBP11.92□□□□□ -0.5
TRBV20-1-201ENST00000390394 PPP4R2Q9NY27 417 aa11.92□□□□□ -0.5
TRBV20-1-201ENST00000390394 SLX4Q8IY92 1834 aa11.92□□□□□ -0.5
TRBV20-1-201ENST00000390394 ZNF804BA4D1E1 1349 aa11.91□□□□□ -0.5
TRBV20-1-201ENST00000390394 ARFGEF1Q9Y6D6 1849 aa11.91□□□□□ -0.5
TRBV20-1-201ENST00000390394 G3V3G9 751 aa11.91□□□□□ -0.5
TRBV20-1-201ENST00000390394 UFL1O94874 794 aa11.91□□□□□ -0.5
TRBV20-1-201ENST00000390394 GPSM2P81274 684 aa11.91□□□□□ -0.5
TRBV20-1-201ENST00000390394 CAVIN4Q5BKX8 364 aa11.91□□□□□ -0.5
TRBV20-1-201ENST00000390394 DCAF8Q5TAQ9 597 aa11.91□□□□□ -0.5
TRBV20-1-201ENST00000390394 ARHGAP27Q6ZUM4 889 aa11.91□□□□□ -0.5
TRBV20-1-201ENST00000390394 RHPN1Q8TCX5 695 aa11.91□□□□□ -0.5
TRBV20-1-201ENST00000390394 LPIN2Q92539 896 aa11.91□□□□□ -0.5
TRBV20-1-201ENST00000390394 EXOC6BQ9Y2D4 811 aa11.91□□□□□ -0.5
TRBV20-1-201ENST00000390394 LRRC37AA6NMS7 1700 aa11.9□□□□□ -0.5
TRBV20-1-201ENST00000390394 ATP2B3Q16720 1220 aa11.9□□□□□ -0.5
TRBV20-1-201ENST00000390394 WASHC4Q2M389 1173 aa11.9□□□□□ -0.5
TRBV20-1-201ENST00000390394 C15orf52Q6ZUT6 534 aaKnown RBP11.9□□□□□ -0.5
TRBV20-1-201ENST00000390394 CENPQQ7L2Z9 268 aaPredicted RBP11.9□□□□□ -0.5
TRBV20-1-201ENST00000390394 VPS37DQ86XT2 251 aa11.9□□□□□ -0.5
TRBV20-1-201ENST00000390394 TBC1D16Q8TBP0 767 aa11.9□□□□□ -0.5
TRBV20-1-201ENST00000390394 GPBP1L1Q9HC44 474 aaPredicted RBP11.9□□□□□ -0.5
TRBV20-1-201ENST00000390394 WWC3Q9ULE0 1092 aa11.9□□□□□ -0.5
TRBV20-1-201ENST00000390394 CACNA1SQ13698 1873 aa11.89□□□□□ -0.51
TRBV20-1-201ENST00000390394 TAF5LO75529 589 aa11.89□□□□□ -0.51
TRBV20-1-201ENST00000390394 YBX3P16989 372 aaKnown RBP eCLIP11.89□□□□□ -0.51
TRBV20-1-201ENST00000390394 LMNB1P20700 586 aa11.89□□□□□ -0.51
TRBV20-1-201ENST00000390394 TFCP2Q12800 502 aa11.89□□□□□ -0.51
TRBV20-1-201ENST00000390394 GORABQ5T7V8 394 aa11.89□□□□□ -0.51
TRBV20-1-201ENST00000390394 ZNF804AQ7Z570 1209 aa11.89□□□□□ -0.51
TRBV20-1-201ENST00000390394 SMC5Q8IY18 1101 aa11.89□□□□□ -0.51
TRBV20-1-201ENST00000390394 VGLL2Q8N8G2 317 aa11.89□□□□□ -0.51
TRBV20-1-201ENST00000390394 HELBQ8NG08 1087 aaPredicted RBP11.89□□□□□ -0.51
TRBV20-1-201ENST00000390394 JDP2Q8WYK2 163 aa11.89□□□□□ -0.51
TRBV20-1-201ENST00000390394 GPATCH3Q96I76 525 aa11.89□□□□□ -0.51
TRBV20-1-201ENST00000390394 GNL3LQ9NVN8 582 aaKnown RBP11.89□□□□□ -0.51
TRBV20-1-201ENST00000390394 MED23Q9ULK4 1368 aa11.89□□□□□ -0.51
TRBV20-1-201ENST00000390394 PPIP5K2O43314 1243 aa11.88□□□□□ -0.51
TRBV20-1-201ENST00000390394 SASH1O94885 1247 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms