RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 EMILIN1Q9Y6C2 1016 aa7.26□□□□□ -1.25
ERCC4-202ENST00000389138 MIA2Q96PC5 1412 aa7.26□□□□□ -1.25
ERCC4-202ENST00000389138 PLEKHH2Q8IVE3 1493 aa7.26□□□□□ -1.25
ERCC4-202ENST00000389138 JCADQ9P266 1359 aa7.25□□□□□ -1.25
ERCC4-202ENST00000389138 RGS20O76081 388 aa7.25□□□□□ -1.25
ERCC4-202ENST00000389138 CD53P19397 219 aa7.25□□□□□ -1.25
ERCC4-202ENST00000389138 TMC4Q7Z404 712 aa7.25□□□□□ -1.25
ERCC4-202ENST00000389138 USP48Q86UV5 1035 aa7.25□□□□□ -1.25
ERCC4-202ENST00000389138 ANKMY2Q8IV38 441 aa7.25□□□□□ -1.25
ERCC4-202ENST00000389138 CXorf38Q8TB03 319 aa7.25□□□□□ -1.25
ERCC4-202ENST00000389138 APBA2Q99767 749 aa7.25□□□□□ -1.25
ERCC4-202ENST00000389138 ARPC5LQ9BPX5 153 aa7.25□□□□□ -1.25
ERCC4-202ENST00000389138 TYW1Q9NV66 732 aaKnown RBP7.25□□□□□ -1.25
ERCC4-202ENST00000389138 SEPT3Q9UH03 358 aa7.25□□□□□ -1.25
ERCC4-202ENST00000389138 DNMT3AQ9Y6K1 912 aaPredicted RBP7.25□□□□□ -1.25
ERCC4-202ENST00000389138 KIAA1107Q9UPP5 1409 aa7.25□□□□□ -1.25
ERCC4-202ENST00000389138 TIAM1Q13009 1591 aa7.25□□□□□ -1.25
ERCC4-202ENST00000389138 RPGRIP1LQ68CZ1 1315 aa7.25□□□□□ -1.25
ERCC4-202ENST00000389138 CCDC18Q5T9S5 1454 aa7.25□□□□□ -1.25
ERCC4-202ENST00000389138 SCAF11Q99590 1463 aaKnown RBP7.25□□□□□ -1.25
ERCC4-202ENST00000389138 SORBS3O60504 671 aa7.25□□□□□ -1.25
ERCC4-202ENST00000389138 FAM193AP78312 1265 aa7.25□□□□□ -1.25
ERCC4-202ENST00000389138 SWI5Q1ZZU3 235 aa7.25□□□□□ -1.25
ERCC4-202ENST00000389138 CAPN12Q6ZSI9 719 aa7.25□□□□□ -1.25
ERCC4-202ENST00000389138 PCGF5Q86SE9 256 aa7.25□□□□□ -1.25
ERCC4-202ENST00000389138 WDR75Q8IWA0 830 aaKnown RBP7.25□□□□□ -1.25
ERCC4-202ENST00000389138 FRMD6Q96NE9 622 aa7.25□□□□□ -1.25
ERCC4-202ENST00000389138 PAGR1Q9BTK6 254 aa7.25□□□□□ -1.25
ERCC4-202ENST00000389138 EVA1BQ9NVM1 165 aa7.25□□□□□ -1.25
ERCC4-202ENST00000389138 FCF1Q9Y324 198 aaKnown RBP7.25□□□□□ -1.25
ERCC4-202ENST00000389138 SETBP1Q9Y6X0 1596 aa7.25□□□□□ -1.25
ERCC4-202ENST00000389138 KCNH2Q12809 1159 aa7.24□□□□□ -1.25
ERCC4-202ENST00000389138 DPYDQ12882 1025 aa7.24□□□□□ -1.25
ERCC4-202ENST00000389138 CCSAPQ6IQ19 270 aaPredicted RBP7.24□□□□□ -1.25
ERCC4-202ENST00000389138 PLEKHM2Q8IWE5 1019 aa7.24□□□□□ -1.25
ERCC4-202ENST00000389138 PGBD3Q8N328 593 aa7.24□□□□□ -1.25
ERCC4-202ENST00000389138 GTF3C2Q8WUA4 911 aaPredicted RBP7.24□□□□□ -1.25
ERCC4-202ENST00000389138 C12orf49Q9H741 205 aa7.24□□□□□ -1.25
ERCC4-202ENST00000389138 DDX41Q9UJV9 622 aaKnown RBP7.24□□□□□ -1.25
ERCC4-202ENST00000389138 CFAP65Q6ZU64 1925 aaKnown RBP7.24□□□□□ -1.25
ERCC4-202ENST00000389138 CLSPNQ9HAW4 1339 aa7.24□□□□□ -1.25
ERCC4-202ENST00000389138 GPATCH8Q9UKJ3 1502 aaKnown RBP7.24□□□□□ -1.25
ERCC4-202ENST00000389138 IFRD1O00458 451 aaPredicted RBP7.24□□□□□ -1.25
ERCC4-202ENST00000389138 FAM163BP0C2L3 166 aa7.24□□□□□ -1.25
ERCC4-202ENST00000389138 SKIP12755 728 aa7.24□□□□□ -1.25
ERCC4-202ENST00000389138 RPIAP49247 311 aa7.24□□□□□ -1.25
ERCC4-202ENST00000389138 SAFB2Q14151 953 aaKnown RBP eCLIP7.24□□□□□ -1.25
ERCC4-202ENST00000389138 ZNF772Q68DY9 489 aaPredicted RBP7.24□□□□□ -1.25
ERCC4-202ENST00000389138 GET4Q7L5D6 327 aaPredicted RBP7.24□□□□□ -1.25
ERCC4-202ENST00000389138 CCDC24Q8N4L8 307 aa7.24□□□□□ -1.25
ERCC4-202ENST00000389138 PNMA1Q8ND90 353 aa7.24□□□□□ -1.25
ERCC4-202ENST00000389138 C1orf131Q8NDD1 294 aaKnown RBP7.24□□□□□ -1.25
ERCC4-202ENST00000389138 MRS2Q9HD23 443 aa7.24□□□□□ -1.25
ERCC4-202ENST00000389138 PRKAB1Q9Y478 270 aa7.24□□□□□ -1.25
ERCC4-202ENST00000389138 SCINQ9Y6U3 715 aa7.24□□□□□ -1.25
ERCC4-202ENST00000389138 SLIT1O75093 1534 aa7.23□□□□□ -1.25
ERCC4-202ENST00000389138 CCNB3Q8WWL7 1395 aa7.23□□□□□ -1.25
ERCC4-202ENST00000389138 NWD1Q149M9 1564 aa7.23□□□□□ -1.25
ERCC4-202ENST00000389138 PPEF1O14829 653 aaPredicted RBP7.23□□□□□ -1.25
ERCC4-202ENST00000389138 ZBTB24O43167 697 aaPredicted RBP7.23□□□□□ -1.25
ERCC4-202ENST00000389138 F12P00748 615 aaPredicted RBP7.23□□□□□ -1.25
ERCC4-202ENST00000389138 HNRNPMP52272 730 aaKnown RBP eCLIP7.23□□□□□ -1.25
ERCC4-202ENST00000389138 FMR1Q06787 632 aaKnown RBP eCLIP7.23□□□□□ -1.25
ERCC4-202ENST00000389138 DIEXFQ68CQ4 756 aaKnown RBP7.23□□□□□ -1.25
ERCC4-202ENST00000389138 ARMC2Q8NEN0 867 aa7.23□□□□□ -1.25
ERCC4-202ENST00000389138 NEUROD6Q96NK8 337 aa7.23□□□□□ -1.25
ERCC4-202ENST00000389138 SETDB2Q96T68 719 aa7.23□□□□□ -1.25
ERCC4-202ENST00000389138 KDM5AP29375 1690 aaKnown RBP7.23□□□□□ -1.25
ERCC4-202ENST00000389138 ARHGAP23Q9P227 1491 aa7.22□□□□□ -1.25
ERCC4-202ENST00000389138 CEP152O94986 1710 aa7.22□□□□□ -1.25
ERCC4-202ENST00000389138 PER1O15534 1290 aaPredicted RBP7.22□□□□□ -1.25
ERCC4-202ENST00000389138 DAB2P98082 770 aa7.22□□□□□ -1.25
ERCC4-202ENST00000389138 NCOA4Q13772 614 aa7.22□□□□□ -1.25
ERCC4-202ENST00000389138 PRIMPOLQ96LW4 560 aa7.22□□□□□ -1.25
ERCC4-202ENST00000389138 CEP63Q96MT8 703 aa7.22□□□□□ -1.25
ERCC4-202ENST00000389138 TPX2Q9ULW0 747 aaKnown RBP7.22□□□□□ -1.25
ERCC4-202ENST00000389138 LRP5O75197 1615 aa7.22□□□□□ -1.25
ERCC4-202ENST00000389138 EP400Q96L91 3159 aa7.22□□□□□ -1.25
ERCC4-202ENST00000389138 RRBP1Q9P2E9 1410 aaKnown RBP7.22□□□□□ -1.25
ERCC4-202ENST00000389138 TREHO43280 583 aa7.22□□□□□ -1.25
ERCC4-202ENST00000389138 PRPF38AQ8NAV1 312 aaKnown RBP7.22□□□□□ -1.25
ERCC4-202ENST00000389138 NFATC2IPQ8NCF5 419 aa7.22□□□□□ -1.25
ERCC4-202ENST00000389138 CASS4Q9NQ75 786 aa7.22□□□□□ -1.25
ERCC4-202ENST00000389138 VTI1BQ9UEU0 232 aa7.22□□□□□ -1.25
ERCC4-202ENST00000389138 TMEM94Q12767 1356 aa7.22□□□□□ -1.25
ERCC4-202ENST00000389138 RGS12O14924 1447 aa7.22□□□□□ -1.25
ERCC4-202ENST00000389138 FGD6Q6ZV73 1430 aa7.22□□□□□ -1.25
ERCC4-202ENST00000389138 NCOA2Q15596 1464 aa7.21□□□□□ -1.25
ERCC4-202ENST00000389138 AHDC1Q5TGY3 1603 aaPredicted RBP7.21□□□□□ -1.25
ERCC4-202ENST00000389138 ANP32CO43423 234 aa7.21□□□□□ -1.25
ERCC4-202ENST00000389138 LDHBP07195 334 aaKnown RBP7.21□□□□□ -1.25
ERCC4-202ENST00000389138 CTHP32929 405 aa7.21□□□□□ -1.25
ERCC4-202ENST00000389138 COPB2P35606 906 aa7.21□□□□□ -1.25
ERCC4-202ENST00000389138 EIF4G2P78344 907 aaKnown RBP eCLIP7.21□□□□□ -1.25
ERCC4-202ENST00000389138 C10orf62Q5T681 223 aaPredicted RBP7.21□□□□□ -1.25
ERCC4-202ENST00000389138 ICE2Q659A1 982 aa7.21□□□□□ -1.25
ERCC4-202ENST00000389138 LARP1Q6PKG0 1096 aaKnown RBP7.21□□□□□ -1.25
ERCC4-202ENST00000389138 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.21□□□□□ -1.25
ERCC4-202ENST00000389138 CXXC1Q9P0U4 656 aaPredicted RBP7.21□□□□□ -1.25
ERCC4-202ENST00000389138 ERVK-7P63135 1459 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms