RNA–Protein interactions for RNA: ENST00000382519.8

CD9-204, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-204ENST00000382519 RTL9Q8NET4 1388 aa23.18■■□□□ 1.3
CD9-204ENST00000382519 ECE2O60344 883 aa23.18■■□□□ 1.3
CD9-204ENST00000382519 ITGBL1O95965 494 aaPredicted RBP23.18■■□□□ 1.3
CD9-204ENST00000382519 DOK7Q18PE1 504 aa23.18■■□□□ 1.3
CD9-204ENST00000382519 USP50Q70EL3 339 aaPredicted RBP23.18■■□□□ 1.3
CD9-204ENST00000382519 CNTROBQ8N137 903 aa23.18■■□□□ 1.3
CD9-204ENST00000382519 ADARB2Q9NS39 739 aaKnown RBP23.18■■□□□ 1.3
CD9-204ENST00000382519 XDHP47989 1333 aa23.17■■□□□ 1.3
CD9-204ENST00000382519 ZC3H12CQ9C0D7 883 aaKnown RBP23.17■■□□□ 1.3
CD9-204ENST00000382519 SCN9AQ15858 1988 aa23.17■■□□□ 1.3
CD9-204ENST00000382519 G3V3G9 751 aa23.16■■□□□ 1.3
CD9-204ENST00000382519 DCAF8Q5TAQ9 597 aa23.16■■□□□ 1.3
CD9-204ENST00000382519 JMYQ8N9B5 988 aa23.16■■□□□ 1.3
CD9-204ENST00000382519 PLA2G12BQ9BX93 195 aa23.16■■□□□ 1.3
CD9-204ENST00000382519 E9PSI1 815 aa23.15■■□□□ 1.3
CD9-204ENST00000382519 PSMD14O00487 310 aa23.15■■□□□ 1.3
CD9-204ENST00000382519 CASP7P55210 303 aa23.15■■□□□ 1.3
CD9-204ENST00000382519 FAM161AQ3B820 660 aa23.15■■□□□ 1.3
CD9-204ENST00000382519 PSME4Q14997 1843 aa23.15■■□□□ 1.3
CD9-204ENST00000382519 TRPM7Q96QT4 1865 aa23.14■■□□□ 1.29
CD9-204ENST00000382519 TMEM88BA6NKF7 163 aa23.14■■□□□ 1.29
CD9-204ENST00000382519 BEND3Q5T5X7 828 aa23.14■■□□□ 1.29
CD9-204ENST00000382519 MKRN1Q9UHC7 482 aaKnown RBP23.14■■□□□ 1.29
CD9-204ENST00000382519 ZBTB12Q9Y330 459 aaPredicted RBP23.14■■□□□ 1.29
CD9-204ENST00000382519 CCER2I3L3R5 266 aa23.13■■□□□ 1.29
CD9-204ENST00000382519 ITGA6P23229 1130 aa23.13■■□□□ 1.29
CD9-204ENST00000382519 IGHMBP2P38935 993 aaKnown RBP23.13■■□□□ 1.29
CD9-204ENST00000382519 SLC4A10Q6U841 1118 aa23.13■■□□□ 1.29
CD9-204ENST00000382519 BSDC1Q9NW68 430 aaPredicted RBP23.13■■□□□ 1.29
CD9-204ENST00000382519 SHTN1A0MZ66 631 aa23.12■■□□□ 1.29
CD9-204ENST00000382519 ATP2B4P23634 1241 aa23.12■■□□□ 1.29
CD9-204ENST00000382519 MICALL2Q8IY33 904 aa23.12■■□□□ 1.29
CD9-204ENST00000382519 KCNQ5Q9NR82 932 aa23.12■■□□□ 1.29
CD9-204ENST00000382519 CNOT7Q9UIV1 285 aaKnown RBP23.12■■□□□ 1.29
CD9-204ENST00000382519 H7C1D1 291 aa23.11■■□□□ 1.29
CD9-204ENST00000382519 MINPP1Q9UNW1 487 aa23.11■■□□□ 1.29
CD9-204ENST00000382519 SLFN5Q08AF3 891 aa23.1■■□□□ 1.29
CD9-204ENST00000382519 TRPM4Q8TD43 1214 aa23.1■■□□□ 1.29
CD9-204ENST00000382519 MPHOSPH8Q99549 860 aa23.1■■□□□ 1.29
CD9-204ENST00000382519 CHMP3Q9Y3E7 222 aa23.1■■□□□ 1.29
CD9-204ENST00000382519 CNTNAP1P78357 1384 aa23.1■■□□□ 1.29
CD9-204ENST00000382519 A0A1B0GUL6 1792 aa23.09■■□□□ 1.29
CD9-204ENST00000382519 CSF1RP07333 972 aa23.09■■□□□ 1.29
CD9-204ENST00000382519 SRCIN1Q9C0H9 1055 aa23.09■■□□□ 1.29
CD9-204ENST00000382519 ANKRD18BA2A2Z9 1011 aa23.08■■□□□ 1.29
CD9-204ENST00000382519 GRM8O00222 908 aa23.08■■□□□ 1.29
CD9-204ENST00000382519 TRAF5O00463 557 aa23.08■■□□□ 1.29
CD9-204ENST00000382519 RPS12P25398 132 aaKnown RBP23.08■■□□□ 1.29
CD9-204ENST00000382519 CCT4P50991 539 aaKnown RBP23.08■■□□□ 1.29
CD9-204ENST00000382519 DPF2Q92785 391 aa23.08■■□□□ 1.29
CD9-204ENST00000382519 CDCA7LQ96GN5 454 aa23.08■■□□□ 1.29
CD9-204ENST00000382519 C9orf78Q9NZ63 289 aaPredicted RBP23.08■■□□□ 1.29
CD9-204ENST00000382519 MED23Q9ULK4 1368 aa23.08■■□□□ 1.29
CD9-204ENST00000382519 WTIPA6NIX2 430 aaPredicted RBP23.07■■□□□ 1.28
CD9-204ENST00000382519 ALDH1L1O75891 902 aa23.07■■□□□ 1.28
CD9-204ENST00000382519 HIRAP54198 1017 aaPredicted RBP23.07■■□□□ 1.28
CD9-204ENST00000382519 FMR1Q06787 632 aaKnown RBP eCLIP23.07■■□□□ 1.28
CD9-204ENST00000382519 MRPL50Q8N5N7 158 aaKnown RBP23.07■■□□□ 1.28
CD9-204ENST00000382519 ABT1Q9ULW3 272 aaKnown RBP23.07■■□□□ 1.28
CD9-204ENST00000382519 FOXO4P98177 505 aa23.06■■□□□ 1.28
CD9-204ENST00000382519 IFIT5Q13325 482 aaKnown RBP23.06■■□□□ 1.28
CD9-204ENST00000382519 SAMD7Q7Z3H4 446 aa23.06■■□□□ 1.28
CD9-204ENST00000382519 VIL1P09327 827 aaKnown RBP23.05■■□□□ 1.28
CD9-204ENST00000382519 TBC1D10BQ4KMP7 808 aaPredicted RBP23.05■■□□□ 1.28
CD9-204ENST00000382519 GLIS2Q9BZE0 524 aaPredicted RBP23.05■■□□□ 1.28
CD9-204ENST00000382519 ANKRD2Q9GZV1 360 aa23.05■■□□□ 1.28
CD9-204ENST00000382519 LMBR1LQ6UX01 489 aa23.04■■□□□ 1.28
CD9-204ENST00000382519 ZC3H15Q8WU90 426 aaKnown RBP23.04■■□□□ 1.28
CD9-204ENST00000382519 SSH1Q8WYL5 1049 aa23.04■■□□□ 1.28
CD9-204ENST00000382519 LEMD3Q9Y2U8 911 aa23.04■■□□□ 1.28
CD9-204ENST00000382519 PTPRCP08575 1304 aa23.04■■□□□ 1.28
CD9-204ENST00000382519 ZNF646O15015 1829 aaPredicted RBP23.03■■□□□ 1.28
CD9-204ENST00000382519 KCNJ4P48050 445 aa23.03■■□□□ 1.28
CD9-204ENST00000382519 EPHA10Q5JZY3 1008 aa23.03■■□□□ 1.28
CD9-204ENST00000382519 RBM26Q5T8P6 1007 aaKnown RBP23.03■■□□□ 1.28
CD9-204ENST00000382519 PODNQ7Z5L7 613 aa23.03■■□□□ 1.28
CD9-204ENST00000382519 PGAP2Q9UHJ9 254 aa23.03■■□□□ 1.28
CD9-204ENST00000382519 POLR2AP24928 1970 aaKnown RBP23.03■■□□□ 1.28
CD9-204ENST00000382519 ZNF804BA4D1E1 1349 aa23.03■■□□□ 1.28
CD9-204ENST00000382519 EGFRP00533 1210 aa23.02■■□□□ 1.28
CD9-204ENST00000382519 HSPA1AP0DMV8 641 aaKnown RBP23.02■■□□□ 1.28
CD9-204ENST00000382519 HSPA1BP0DMV9 641 aaKnown RBP23.02■■□□□ 1.28
CD9-204ENST00000382519 VEGFBP49765 207 aa23.02■■□□□ 1.28
CD9-204ENST00000382519 CHRNDQ07001 517 aa23.02■■□□□ 1.28
CD9-204ENST00000382519 TAF7LQ5H9L4 462 aa23.02■■□□□ 1.28
CD9-204ENST00000382519 RSBN1LQ6PCB5 846 aaPredicted RBP23.02■■□□□ 1.28
CD9-204ENST00000382519 FBXW7Q969H0 707 aa23.02■■□□□ 1.28
CD9-204ENST00000382519 ZNF609O15014 1411 aa23.01■■□□□ 1.27
CD9-204ENST00000382519 USP17L3A6NCW0 530 aa23.01■■□□□ 1.27
CD9-204ENST00000382519 USP17L4A6NCW7 530 aa23.01■■□□□ 1.27
CD9-204ENST00000382519 RASSF10A6NK89 507 aa23.01■■□□□ 1.27
CD9-204ENST00000382519 CCDC57Q2TAC2 916 aa23.01■■□□□ 1.27
CD9-204ENST00000382519 KIF4BQ2VIQ3 1234 aa23.01■■□□□ 1.27
CD9-204ENST00000382519 DEFB115Q30KQ5 88 aa23.01■■□□□ 1.27
CD9-204ENST00000382519 USP17L1Q7RTZ2 530 aa23.01■■□□□ 1.27
CD9-204ENST00000382519 AGBL3Q8NEM8 1001 aa23.01■■□□□ 1.27
CD9-204ENST00000382519 SMC4Q9NTJ3 1288 aa23.01■■□□□ 1.27
CD9-204ENST00000382519 CELF2O95319 508 aaKnown RBP23■■□□□ 1.27
CD9-204ENST00000382519 KLRK1P26718 216 aa23■■□□□ 1.27
CD9-204ENST00000382519 PAXIP1Q6ZW49 1069 aaPredicted RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms