RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 PPP1R12CQ9BZL4 782 aa5.58□□□□□ -1.52
PTPRD-203ENST00000381196 ZNF219Q9P2Y4 722 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-203ENST00000381196 MED14O60244 1454 aa5.58□□□□□ -1.52
PTPRD-203ENST00000381196 ADGRB3O60242 1522 aa5.58□□□□□ -1.52
PTPRD-203ENST00000381196 SNW1Q13573 536 aaKnown RBP5.58□□□□□ -1.52
PTPRD-203ENST00000381196 WDR78Q5VTH9 848 aa5.58□□□□□ -1.52
PTPRD-203ENST00000381196 C8orf37Q96NL8 207 aa5.58□□□□□ -1.52
PTPRD-203ENST00000381196 RBM27Q9P2N5 1060 aaKnown RBP5.58□□□□□ -1.52
PTPRD-203ENST00000381196 U3KPZ7 1027 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-203ENST00000381196 MTMR3Q13615 1198 aa5.58□□□□□ -1.52
PTPRD-203ENST00000381196 TTC39AQ5SRH9 613 aa5.58□□□□□ -1.52
PTPRD-203ENST00000381196 PLVAPQ9BX97 442 aa5.58□□□□□ -1.52
PTPRD-203ENST00000381196 CDK12Q9NYV4 1490 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-203ENST00000381196 PTPRTO14522 1441 aa5.58□□□□□ -1.52
PTPRD-203ENST00000381196 ADGRL3Q9HAR2 1447 aa5.58□□□□□ -1.52
PTPRD-203ENST00000381196 EXOC5O00471 708 aa5.58□□□□□ -1.52
PTPRD-203ENST00000381196 BRPF1P55201 1214 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-203ENST00000381196 PRPF38AQ8NAV1 312 aaKnown RBP5.58□□□□□ -1.52
PTPRD-203ENST00000381196 TTC12Q9H892 705 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-203ENST00000381196 ZNF608Q9ULD9 1512 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-203ENST00000381196 CCDC172P0C7W6 258 aa5.58□□□□□ -1.52
PTPRD-203ENST00000381196 JAKMIP2Q96AA8 810 aa5.58□□□□□ -1.52
PTPRD-203ENST00000381196 CDK19Q9BWU1 502 aa5.58□□□□□ -1.52
PTPRD-203ENST00000381196 TTC41PQ6P2S7 1318 aa5.58□□□□□ -1.52
PTPRD-203ENST00000381196 IBSPP21815 317 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-203ENST00000381196 CASQ1P31415 396 aa5.58□□□□□ -1.52
PTPRD-203ENST00000381196 MAP2K2P36507 400 aa5.58□□□□□ -1.52
PTPRD-203ENST00000381196 CCDC158Q5M9N0 1113 aa5.58□□□□□ -1.52
PTPRD-203ENST00000381196 TNPO1Q92973 898 aaKnown RBP5.58□□□□□ -1.52
PTPRD-203ENST00000381196 SCLT1Q96NL6 688 aa5.58□□□□□ -1.52
PTPRD-203ENST00000381196 NBPF3Q9H094 633 aa5.58□□□□□ -1.52
PTPRD-203ENST00000381196 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.57□□□□□ -1.52
PTPRD-203ENST00000381196 FCHSD2O94868 740 aa5.57□□□□□ -1.52
PTPRD-203ENST00000381196 LMNTD2Q8IXW0 634 aa5.57□□□□□ -1.52
PTPRD-203ENST00000381196 CDK5RAP3Q96JB5 506 aa5.57□□□□□ -1.52
PTPRD-203ENST00000381196 UPF3BQ9BZI7 483 aaKnown RBP5.57□□□□□ -1.52
PTPRD-203ENST00000381196 SPATS2LQ9NUQ6 558 aaKnown RBP5.57□□□□□ -1.52
PTPRD-203ENST00000381196 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.57□□□□□ -1.52
PTPRD-203ENST00000381196 RABGAP1Q9Y3P9 1069 aa5.57□□□□□ -1.52
PTPRD-203ENST00000381196 PHLPP2Q6ZVD8 1323 aa5.57□□□□□ -1.52
PTPRD-203ENST00000381196 ARHGAP29Q52LW3 1261 aa5.57□□□□□ -1.52
PTPRD-203ENST00000381196 FAM71BQ8TC56 605 aa5.57□□□□□ -1.52
PTPRD-203ENST00000381196 FSD1Q9BTV5 496 aa5.57□□□□□ -1.52
PTPRD-203ENST00000381196 BATF3Q9NR55 127 aa5.57□□□□□ -1.52
PTPRD-203ENST00000381196 RMND1Q9NWS8 449 aa5.57□□□□□ -1.52
PTPRD-203ENST00000381196 BCAP29Q9UHQ4 241 aa5.57□□□□□ -1.52
PTPRD-203ENST00000381196 ATP10BO94823 1461 aa5.57□□□□□ -1.52
PTPRD-203ENST00000381196 DNAJC8O75937 253 aaPredicted RBP5.57□□□□□ -1.52
PTPRD-203ENST00000381196 ZSCAN23Q3MJ62 389 aa5.57□□□□□ -1.52
PTPRD-203ENST00000381196 CFAP58Q5T655 872 aa5.57□□□□□ -1.52
PTPRD-203ENST00000381196 ARHGAP24Q8N264 748 aa5.57□□□□□ -1.52
PTPRD-203ENST00000381196 MAGEC2Q9UBF1 373 aaPredicted RBP5.57□□□□□ -1.52
PTPRD-203ENST00000381196 LMTK3Q96Q04 1460 aa5.57□□□□□ -1.52
PTPRD-203ENST00000381196 CLTCQ00610 1675 aaKnown RBP5.57□□□□□ -1.52
PTPRD-203ENST00000381196 PPP1R12BO60237 982 aaPredicted RBP5.57□□□□□ -1.52
PTPRD-203ENST00000381196 KRT18P05783 430 aaKnown RBP5.57□□□□□ -1.52
PTPRD-203ENST00000381196 ZSCAN25Q6NSZ9 544 aa5.57□□□□□ -1.52
PTPRD-203ENST00000381196 CCDC174Q6PII3 467 aa5.57□□□□□ -1.52
PTPRD-203ENST00000381196 CCDC170Q8IYT3 715 aa5.57□□□□□ -1.52
PTPRD-203ENST00000381196 MRFAP1L1Q96HT8 127 aa5.57□□□□□ -1.52
PTPRD-203ENST00000381196 PHF8Q9UPP1 1060 aa5.57□□□□□ -1.52
PTPRD-203ENST00000381196 DISP3Q9P2K9 1392 aa5.57□□□□□ -1.52
PTPRD-203ENST00000381196 DESP17661 470 aa5.57□□□□□ -1.52
PTPRD-203ENST00000381196 NMIQ13287 307 aaPredicted RBP5.57□□□□□ -1.52
PTPRD-203ENST00000381196 CFAP57Q96MR6 1250 aa5.57□□□□□ -1.52
PTPRD-203ENST00000381196 PPRC1Q5VV67 1664 aaKnown RBP5.57□□□□□ -1.52
PTPRD-203ENST00000381196 TTC21BQ7Z4L5 1316 aa5.57□□□□□ -1.52
PTPRD-203ENST00000381196 DYNC1I2Q13409 638 aaKnown RBP5.57□□□□□ -1.52
PTPRD-203ENST00000381196 MUM1L1Q5H9M0 696 aa5.57□□□□□ -1.52
PTPRD-203ENST00000381196 ANKRD45Q5TZF3 282 aa5.57□□□□□ -1.52
PTPRD-203ENST00000381196 NAP1L1P55209 391 aaKnown RBP5.57□□□□□ -1.52
PTPRD-203ENST00000381196 MAP3K21Q5TCX8 1036 aa5.57□□□□□ -1.52
PTPRD-203ENST00000381196 KCNG4Q8TDN1 519 aa5.57□□□□□ -1.52
PTPRD-203ENST00000381196 BCL2L13Q9BXK5 485 aa5.57□□□□□ -1.52
PTPRD-203ENST00000381196 ANKIB1Q9P2G1 1089 aa5.57□□□□□ -1.52
PTPRD-203ENST00000381196 ZNF644Q9H582 1327 aaPredicted RBP5.57□□□□□ -1.52
PTPRD-203ENST00000381196 A0A087WZG4 1122 aa5.57□□□□□ -1.52
PTPRD-203ENST00000381196 TRIM21P19474 475 aaKnown RBP5.57□□□□□ -1.52
PTPRD-203ENST00000381196 RASSF2P50749 326 aa5.57□□□□□ -1.52
PTPRD-203ENST00000381196 CRACR2BQ8N4Y2 399 aaPredicted RBP5.57□□□□□ -1.52
PTPRD-203ENST00000381196 ACTR5Q9H9F9 607 aaPredicted RBP5.57□□□□□ -1.52
PTPRD-203ENST00000381196 PLCB1Q9NQ66 1216 aa5.57□□□□□ -1.52
PTPRD-203ENST00000381196 PSD3Q9NYI0 1048 aa5.57□□□□□ -1.52
PTPRD-203ENST00000381196 RASAL2Q9UJF2 1139 aa5.57□□□□□ -1.52
PTPRD-203ENST00000381196 MROH2AA6NES4 1674 aa5.56□□□□□ -1.52
PTPRD-203ENST00000381196 VWDEQ8N2E2 1590 aa5.56□□□□□ -1.52
PTPRD-203ENST00000381196 RFX7Q2KHR2 1363 aa5.56□□□□□ -1.52
PTPRD-203ENST00000381196 CNGA1P29973 690 aa5.56□□□□□ -1.52
PTPRD-203ENST00000381196 CHMP4BP1P59074 171 aa5.56□□□□□ -1.52
PTPRD-203ENST00000381196 DEUP1Q05D60 604 aa5.56□□□□□ -1.52
PTPRD-203ENST00000381196 TTF2Q9UNY4 1162 aaKnown RBP5.56□□□□□ -1.52
PTPRD-203ENST00000381196 EPS15P42566 896 aa5.56□□□□□ -1.52
PTPRD-203ENST00000381196 RNASELQ05823 741 aaKnown RBP5.56□□□□□ -1.52
PTPRD-203ENST00000381196 CNGA4Q8IV77 575 aa5.56□□□□□ -1.52
PTPRD-203ENST00000381196 MSL3Q8N5Y2 521 aaKnown RBP5.56□□□□□ -1.52
PTPRD-203ENST00000381196 LLPHQ9BRT6 129 aaKnown RBP5.56□□□□□ -1.52
PTPRD-203ENST00000381196 DNAI2Q9GZS0 605 aa5.56□□□□□ -1.52
PTPRD-203ENST00000381196 EFCAB8A8MWE9 144 aa5.56□□□□□ -1.52
PTPRD-203ENST00000381196 CCDC175P0C221 793 aa5.56□□□□□ -1.52
PTPRD-203ENST00000381196 ARHGAP18Q8N392 663 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms