RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 GREM2Q9H772 168 aa17.07■□□□□ 0.32
CLCN4-201ENST00000380829 GOLIM4O00461 696 aa17.07■□□□□ 0.32
CLCN4-201ENST00000380829 TTLL11Q8NHH1 800 aa17.07■□□□□ 0.32
CLCN4-201ENST00000380829 SEC62Q99442 399 aaKnown RBP17.07■□□□□ 0.32
CLCN4-201ENST00000380829 NUP98P52948 1817 aa17.07■□□□□ 0.32
CLCN4-201ENST00000380829 PALLDQ8WX93 1383 aa17.06■□□□□ 0.32
CLCN4-201ENST00000380829 BAG4O95429 457 aaKnown RBP17.06■□□□□ 0.32
CLCN4-201ENST00000380829 ITGA6P23229 1130 aa17.06■□□□□ 0.32
CLCN4-201ENST00000380829 CCDC129Q6ZRS4 1044 aa17.06■□□□□ 0.32
CLCN4-201ENST00000380829 ZDHHC9Q9Y397 364 aa17.06■□□□□ 0.32
CLCN4-201ENST00000380829 ANKRD36CQ5JPF3 1778 aa17.06■□□□□ 0.32
CLCN4-201ENST00000380829 CTSWP56202 376 aa17.06■□□□□ 0.32
CLCN4-201ENST00000380829 SLFNL1Q499Z3 407 aa17.06■□□□□ 0.32
CLCN4-201ENST00000380829 KCNB2Q92953 911 aa17.06■□□□□ 0.32
CLCN4-201ENST00000380829 PAG1Q9NWQ8 432 aa17.06■□□□□ 0.32
CLCN4-201ENST00000380829 FAM177BA6PVY3 158 aa17.05■□□□□ 0.32
CLCN4-201ENST00000380829 ZKSCAN1P17029 563 aaPredicted RBP17.05■□□□□ 0.32
CLCN4-201ENST00000380829 ADORA1P30542 326 aa17.05■□□□□ 0.32
CLCN4-201ENST00000380829 FOXD4L5Q5VV16 416 aaPredicted RBP17.05■□□□□ 0.32
CLCN4-201ENST00000380829 RUFY3Q7L099 469 aa17.05■□□□□ 0.32
CLCN4-201ENST00000380829 KBTBD3Q8NAB2 608 aa17.05■□□□□ 0.32
CLCN4-201ENST00000380829 FOXD4L4Q8WXT5 416 aaPredicted RBP17.05■□□□□ 0.32
CLCN4-201ENST00000380829 SLC27A2O14975 620 aa17.05■□□□□ 0.32
CLCN4-201ENST00000380829 TAF5LO75529 589 aa17.05■□□□□ 0.32
CLCN4-201ENST00000380829 IFIT1P09914 478 aaKnown RBP17.05■□□□□ 0.32
CLCN4-201ENST00000380829 ZNF34Q8IZ26 560 aa17.05■□□□□ 0.32
CLCN4-201ENST00000380829 BCL9LQ86UU0 1499 aa17.04■□□□□ 0.32
CLCN4-201ENST00000380829 COL9A3Q14050 684 aaPredicted RBP17.04■□□□□ 0.32
CLCN4-201ENST00000380829 INTS4Q96HW7 963 aaKnown RBP17.04■□□□□ 0.32
CLCN4-201ENST00000380829 TAF6LQ9Y6J9 622 aa17.04■□□□□ 0.32
CLCN4-201ENST00000380829 LDHAL6AQ6ZMR3 332 aa17.04■□□□□ 0.32
CLCN4-201ENST00000380829 CLEC17AQ6ZS10 378 aa17.04■□□□□ 0.32
CLCN4-201ENST00000380829 GORABQ5T7V8 394 aa17.03■□□□□ 0.32
CLCN4-201ENST00000380829 ANP32BQ92688 251 aaKnown RBP17.03■□□□□ 0.32
CLCN4-201ENST00000380829 XAGE2Q96GT9 111 aa17.03■□□□□ 0.32
CLCN4-201ENST00000380829 MAP7D2Q96T17 732 aa17.03■□□□□ 0.32
CLCN4-201ENST00000380829 ZSWIM6Q9HCJ5 1215 aa17.03■□□□□ 0.32
CLCN4-201ENST00000380829 PDRG1Q9NUG6 133 aa17.03■□□□□ 0.32
CLCN4-201ENST00000380829 FBXO3Q9UK99 471 aa17.03■□□□□ 0.32
CLCN4-201ENST00000380829 CYP46A1Q9Y6A2 500 aa17.03■□□□□ 0.32
CLCN4-201ENST00000380829 RFX7Q2KHR2 1363 aa17.02■□□□□ 0.32
CLCN4-201ENST00000380829 ANKRD18BA2A2Z9 1011 aa17.02■□□□□ 0.32
CLCN4-201ENST00000380829 PDE8AO60658 829 aa17.02■□□□□ 0.32
CLCN4-201ENST00000380829 KCNQ4P56696 695 aa17.02■□□□□ 0.32
CLCN4-201ENST00000380829 METTL24Q5JXM2 366 aa17.02■□□□□ 0.32
CLCN4-201ENST00000380829 MCTP1Q6DN14 999 aa17.02■□□□□ 0.32
CLCN4-201ENST00000380829 SMAP1Q8IYB5 467 aaPredicted RBP17.02■□□□□ 0.32
CLCN4-201ENST00000380829 LIMCH1Q9UPQ0 1083 aa17.02■□□□□ 0.32
CLCN4-201ENST00000380829 AKAP2Q9Y2D5 859 aa17.02■□□□□ 0.32
CLCN4-201ENST00000380829 RIC1Q4ADV7 1423 aa17.02■□□□□ 0.32
CLCN4-201ENST00000380829 JCADQ9P266 1359 aa17.02■□□□□ 0.32
CLCN4-201ENST00000380829 VPS72Q15906 364 aa17.02■□□□□ 0.32
CLCN4-201ENST00000380829 SKOR2Q2VWA4 1001 aaPredicted RBP17.02■□□□□ 0.32
CLCN4-201ENST00000380829 MCMDC2Q4G0Z9 681 aa17.02■□□□□ 0.32
CLCN4-201ENST00000380829 SUSD4Q5VX71 490 aa17.02■□□□□ 0.32
CLCN4-201ENST00000380829 CHAMP1Q96JM3 812 aa17.02■□□□□ 0.32
CLCN4-201ENST00000380829 TM6SF1Q9BZW5 370 aa17.02■□□□□ 0.32
CLCN4-201ENST00000380829 RIPOR2Q9Y4F9 1068 aa17.02■□□□□ 0.32
CLCN4-201ENST00000380829 MYH14Q7Z406 1995 aaKnown RBP17.02■□□□□ 0.31
CLCN4-201ENST00000380829 GOLGA6L22H0YM25 854 aa17.01■□□□□ 0.31
CLCN4-201ENST00000380829 LARGE1O95461 756 aa17.01■□□□□ 0.31
CLCN4-201ENST00000380829 FGD1P98174 961 aa17.01■□□□□ 0.31
CLCN4-201ENST00000380829 FKBP4Q02790 459 aaKnown RBP eCLIP17.01■□□□□ 0.31
CLCN4-201ENST00000380829 CNNM1Q9NRU3 951 aa17.01■□□□□ 0.31
CLCN4-201ENST00000380829 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.01■□□□□ 0.31
CLCN4-201ENST00000380829 CAMTA2O94983 1202 aa17.01■□□□□ 0.31
CLCN4-201ENST00000380829 HCLS1P14317 486 aaPredicted RBP17.01■□□□□ 0.31
CLCN4-201ENST00000380829 TERF1P54274 439 aa17.01■□□□□ 0.31
CLCN4-201ENST00000380829 CCDC158Q5M9N0 1113 aa17.01■□□□□ 0.31
CLCN4-201ENST00000380829 TTC39AQ5SRH9 613 aa17.01■□□□□ 0.31
CLCN4-201ENST00000380829 VPS53Q5VIR6 699 aa17.01■□□□□ 0.31
CLCN4-201ENST00000380829 RNF20Q5VTR2 975 aa17.01■□□□□ 0.31
CLCN4-201ENST00000380829 RPAP1Q9BWH6 1393 aaPredicted RBP17.01■□□□□ 0.31
CLCN4-201ENST00000380829 PTF1AQ7RTS3 328 aa17■□□□□ 0.31
CLCN4-201ENST00000380829 TCEANC2Q96MN5 208 aa17■□□□□ 0.31
CLCN4-201ENST00000380829 MYH3P11055 1940 aa17■□□□□ 0.31
CLCN4-201ENST00000380829 SMARCC1Q92922 1105 aaPredicted RBP17■□□□□ 0.31
CLCN4-201ENST00000380829 DTNBO60941 627 aa16.99■□□□□ 0.31
CLCN4-201ENST00000380829 SCARF1Q14162 830 aa16.99■□□□□ 0.31
CLCN4-201ENST00000380829 ATP2B3Q16720 1220 aa16.99■□□□□ 0.31
CLCN4-201ENST00000380829 SH3TC1Q8TE82 1336 aa16.99■□□□□ 0.31
CLCN4-201ENST00000380829 PI16Q6UXB8 463 aa16.99■□□□□ 0.31
CLCN4-201ENST00000380829 DDX49Q9Y6V7 483 aaKnown RBP16.99■□□□□ 0.31
CLCN4-201ENST00000380829 BRD1O95696 1058 aa16.98■□□□□ 0.31
CLCN4-201ENST00000380829 PSMA5P28066 241 aa16.98■□□□□ 0.31
CLCN4-201ENST00000380829 USPL1Q5W0Q7 1092 aa16.98■□□□□ 0.31
CLCN4-201ENST00000380829 UTP14AQ9BVJ6 771 aaKnown RBP16.98■□□□□ 0.31
CLCN4-201ENST00000380829 FAM182BQ5T319 152 aa16.98■□□□□ 0.31
CLCN4-201ENST00000380829 LINC00116Q8NCU8 138 aa16.98■□□□□ 0.31
CLCN4-201ENST00000380829 HMG20BQ9P0W2 317 aa16.98■□□□□ 0.31
CLCN4-201ENST00000380829 USP21Q9UK80 565 aa16.98■□□□□ 0.31
CLCN4-201ENST00000380829 NIP7Q9Y221 180 aaKnown RBP eCLIP16.98■□□□□ 0.31
CLCN4-201ENST00000380829 PTMSP20962 102 aa16.97■□□□□ 0.31
CLCN4-201ENST00000380829 ZMYM1Q5SVZ6 1142 aa16.97■□□□□ 0.31
CLCN4-201ENST00000380829 BLOC1S2Q6QNY1 142 aa16.97■□□□□ 0.31
CLCN4-201ENST00000380829 CCDC83Q8IWF9 413 aa16.97■□□□□ 0.31
CLCN4-201ENST00000380829 FNBP4Q8N3X1 1017 aaPredicted RBP16.97■□□□□ 0.31
CLCN4-201ENST00000380829 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.97■□□□□ 0.31
CLCN4-201ENST00000380829 RREB1Q92766 1687 aa16.97■□□□□ 0.31
CLCN4-201ENST00000380829 VGLL2Q8N8G2 317 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms