RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 CTCFP49711 727 aaPredicted RBP22.13■■□□□ 1.13
HMGN1-204ENST00000380749 DPF2Q92785 391 aa22.13■■□□□ 1.13
HMGN1-204ENST00000380749 PI4KAP2A4QPH2 592 aa22.12■■□□□ 1.13
HMGN1-204ENST00000380749 ANP32CO43423 234 aa22.12■■□□□ 1.13
HMGN1-204ENST00000380749 UFL1O94874 794 aa22.12■■□□□ 1.13
HMGN1-204ENST00000380749 MAP2K1Q02750 393 aaPredicted RBP22.12■■□□□ 1.13
HMGN1-204ENST00000380749 NCBP3Q53F19 620 aaKnown RBP22.12■■□□□ 1.13
HMGN1-204ENST00000380749 PI4KAP1Q8N8J0 262 aa22.12■■□□□ 1.13
HMGN1-204ENST00000380749 GLIS2Q9BZE0 524 aaPredicted RBP22.12■■□□□ 1.13
HMGN1-204ENST00000380749 ZC3H12CQ9C0D7 883 aaKnown RBP22.12■■□□□ 1.13
HMGN1-204ENST00000380749 PGAP2Q9UHJ9 254 aa22.12■■□□□ 1.13
HMGN1-204ENST00000380749 GGA1Q9UJY5 639 aa22.12■■□□□ 1.13
HMGN1-204ENST00000380749 G3V3G9 751 aa22.12■■□□□ 1.13
HMGN1-204ENST00000380749 RPS12P25398 132 aaKnown RBP22.12■■□□□ 1.13
HMGN1-204ENST00000380749 DCAF8Q5TAQ9 597 aa22.12■■□□□ 1.13
HMGN1-204ENST00000380749 ANKRD18AQ8IVF6 992 aa22.12■■□□□ 1.13
HMGN1-204ENST00000380749 JARID2Q92833 1246 aaPredicted RBP22.12■■□□□ 1.13
HMGN1-204ENST00000380749 CAPNS2Q96L46 248 aa22.12■■□□□ 1.13
HMGN1-204ENST00000380749 GPR101Q96P66 508 aaPredicted RBP22.12■■□□□ 1.13
HMGN1-204ENST00000380749 CCDC85AQ96PX6 553 aaPredicted RBP22.12■■□□□ 1.13
HMGN1-204ENST00000380749 PRDM10Q9NQV6 1147 aa22.12■■□□□ 1.13
HMGN1-204ENST00000380749 WBP1LQ9NX94 342 aa22.12■■□□□ 1.13
HMGN1-204ENST00000380749 ZBTB12Q9Y330 459 aaPredicted RBP22.12■■□□□ 1.13
HMGN1-204ENST00000380749 TLL2Q9Y6L7 1015 aa22.12■■□□□ 1.13
HMGN1-204ENST00000380749 CAPN15O75808 1086 aa22.11■■□□□ 1.13
HMGN1-204ENST00000380749 CELF2O95319 508 aaKnown RBP22.11■■□□□ 1.13
HMGN1-204ENST00000380749 CTSWP56202 376 aa22.11■■□□□ 1.13
HMGN1-204ENST00000380749 DOK7Q18PE1 504 aa22.11■■□□□ 1.13
HMGN1-204ENST00000380749 CST9Q5W186 159 aa22.11■■□□□ 1.13
HMGN1-204ENST00000380749 CDC5LQ99459 802 aaKnown RBP22.11■■□□□ 1.13
HMGN1-204ENST00000380749 XDHP47989 1333 aa22.1■■□□□ 1.13
HMGN1-204ENST00000380749 RTL9Q8NET4 1388 aa22.1■■□□□ 1.13
HMGN1-204ENST00000380749 SHTN1A0MZ66 631 aa22.1■■□□□ 1.13
HMGN1-204ENST00000380749 HIRAP54198 1017 aaPredicted RBP22.1■■□□□ 1.13
HMGN1-204ENST00000380749 CDC37L1Q7L3B6 337 aa22.1■■□□□ 1.13
HMGN1-204ENST00000380749 IGKV5-2P06315 115 aa22.09■■□□□ 1.13
HMGN1-204ENST00000380749 GRM1Q13255 1194 aa22.09■■□□□ 1.13
HMGN1-204ENST00000380749 FANCIQ9NVI1 1328 aa22.08■■□□□ 1.13
HMGN1-204ENST00000380749 CYP4F22Q6NT55 531 aa22.08■■□□□ 1.12
HMGN1-204ENST00000380749 ZNF408Q9H9D4 720 aa22.08■■□□□ 1.12
HMGN1-204ENST00000380749 ZNF609O15014 1411 aa22.08■■□□□ 1.12
HMGN1-204ENST00000380749 ZNF646O15015 1829 aaPredicted RBP22.07■■□□□ 1.12
HMGN1-204ENST00000380749 NEURL1BA8MQ27 555 aa22.07■■□□□ 1.12
HMGN1-204ENST00000380749 SLC4A2P04920 1241 aa22.07■■□□□ 1.12
HMGN1-204ENST00000380749 TBC1D10BQ4KMP7 808 aaPredicted RBP22.07■■□□□ 1.12
HMGN1-204ENST00000380749 SAMD7Q7Z3H4 446 aa22.07■■□□□ 1.12
HMGN1-204ENST00000380749 SAPCD2Q86UD0 394 aa22.07■■□□□ 1.12
HMGN1-204ENST00000380749 A0A1B0GUL6 1792 aa22.07■■□□□ 1.12
HMGN1-204ENST00000380749 ZNF316A6NFI3 1004 aaPredicted RBP22.06■■□□□ 1.12
HMGN1-204ENST00000380749 CWF19L2Q2TBE0 894 aaKnown RBP22.06■■□□□ 1.12
HMGN1-204ENST00000380749 BEGAINQ9BUH8 593 aa22.06■■□□□ 1.12
HMGN1-204ENST00000380749 ATP2B4P23634 1241 aa22.05■■□□□ 1.12
HMGN1-204ENST00000380749 FLIIQ13045 1269 aa22.05■■□□□ 1.12
HMGN1-204ENST00000380749 G2E3Q7L622 706 aa22.05■■□□□ 1.12
HMGN1-204ENST00000380749 UBE3BQ7Z3V4 1068 aa22.05■■□□□ 1.12
HMGN1-204ENST00000380749 HHIPL1Q96JK4 782 aa22.05■■□□□ 1.12
HMGN1-204ENST00000380749 KCNQ5Q9NR82 932 aa22.05■■□□□ 1.12
HMGN1-204ENST00000380749 LBX1P52954 281 aa22.04■■□□□ 1.12
HMGN1-204ENST00000380749 FKBP5Q13451 457 aaPredicted RBP22.04■■□□□ 1.12
HMGN1-204ENST00000380749 WDR63Q8IWG1 891 aa22.04■■□□□ 1.12
HMGN1-204ENST00000380749 TTLL11Q8NHH1 800 aa22.04■■□□□ 1.12
HMGN1-204ENST00000380749 MYH16Q9H6N6 1097 aa22.04■■□□□ 1.12
HMGN1-204ENST00000380749 GREM2Q9H772 168 aa22.04■■□□□ 1.12
HMGN1-204ENST00000380749 AKAP11Q9UKA4 1901 aa22.04■■□□□ 1.12
HMGN1-204ENST00000380749 VIL1P09327 827 aaKnown RBP22.03■■□□□ 1.12
HMGN1-204ENST00000380749 HSPA8P11142 646 aaKnown RBP22.03■■□□□ 1.12
HMGN1-204ENST00000380749 KIF4BQ2VIQ3 1234 aa22.03■■□□□ 1.12
HMGN1-204ENST00000380749 KRT26Q7Z3Y9 468 aa22.03■■□□□ 1.12
HMGN1-204ENST00000380749 MED23Q9ULK4 1368 aa22.03■■□□□ 1.12
HMGN1-204ENST00000380749 MAP2K2P36507 400 aa22.02■■□□□ 1.12
HMGN1-204ENST00000380749 RBM26Q5T8P6 1007 aaKnown RBP22.02■■□□□ 1.12
HMGN1-204ENST00000380749 USP48Q86UV5 1035 aa22.02■■□□□ 1.12
HMGN1-204ENST00000380749 DCPSQ96C86 337 aaKnown RBP22.02■■□□□ 1.12
HMGN1-204ENST00000380749 BSDC1Q9NW68 430 aaPredicted RBP22.02■■□□□ 1.12
HMGN1-204ENST00000380749 SALL2Q9Y467 1007 aaPredicted RBP22.02■■□□□ 1.12
HMGN1-204ENST00000380749 CASP8AP2Q9UKL3 1982 aa22.02■■□□□ 1.12
HMGN1-204ENST00000380749 EGFRP00533 1210 aa22.01■■□□□ 1.11
HMGN1-204ENST00000380749 RSBN1LQ6PCB5 846 aaPredicted RBP22.01■■□□□ 1.11
HMGN1-204ENST00000380749 AGBL3Q8NEM8 1001 aa22.01■■□□□ 1.11
HMGN1-204ENST00000380749 DNAAF4Q8WXU2 420 aa22.01■■□□□ 1.11
HMGN1-204ENST00000380749 H7C1W4 665 aa22■■□□□ 1.11
HMGN1-204ENST00000380749 IGHMBP2P38935 993 aaKnown RBP22■■□□□ 1.11
HMGN1-204ENST00000380749 GCKRQ14397 625 aa22■■□□□ 1.11
HMGN1-204ENST00000380749 PODNQ7Z5L7 613 aa21.99■■□□□ 1.11
HMGN1-204ENST00000380749 LINS1Q8NG48 757 aa21.99■■□□□ 1.11
HMGN1-204ENST00000380749 PLA2G12BQ9BX93 195 aa21.99■■□□□ 1.11
HMGN1-204ENST00000380749 GGA3Q9NZ52 723 aa21.99■■□□□ 1.11
HMGN1-204ENST00000380749 MINPP1Q9UNW1 487 aa21.99■■□□□ 1.11
HMGN1-204ENST00000380749 AOC2O75106 756 aa21.99■■□□□ 1.11
HMGN1-204ENST00000380749 HUNKP57058 714 aa21.99■■□□□ 1.11
HMGN1-204ENST00000380749 EXOSC9Q06265 439 aaKnown RBP21.99■■□□□ 1.11
HMGN1-204ENST00000380749 SULF1Q8IWU6 871 aa21.99■■□□□ 1.11
HMGN1-204ENST00000380749 USP17L3A6NCW0 530 aa21.98■■□□□ 1.11
HMGN1-204ENST00000380749 USP17L4A6NCW7 530 aa21.98■■□□□ 1.11
HMGN1-204ENST00000380749 ADM5C9JUS6 153 aa21.98■■□□□ 1.11
HMGN1-204ENST00000380749 VAMP4O75379 141 aa21.98■■□□□ 1.11
HMGN1-204ENST00000380749 CCT4P50991 539 aaKnown RBP21.98■■□□□ 1.11
HMGN1-204ENST00000380749 USP17L1Q7RTZ2 530 aa21.98■■□□□ 1.11
HMGN1-204ENST00000380749 ECM29Q5VYK3 1845 aa21.97■■□□□ 1.11
HMGN1-204ENST00000380749 CA12O43570 354 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms