RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 FILIP1Q7Z7B0 1213 aa8.74□□□□□ -1.01
CDKL5-201ENST00000379989 MBIPQ9NS73 344 aa8.74□□□□□ -1.01
CDKL5-201ENST00000379989 ORC3Q9UBD5 711 aaPredicted RBP8.74□□□□□ -1.01
CDKL5-201ENST00000379989 ELP1O95163 1332 aa8.73□□□□□ -1.01
CDKL5-201ENST00000379989 CCDC93Q567U6 631 aa8.73□□□□□ -1.01
CDKL5-201ENST00000379989 ANKRD45Q5TZF3 282 aa8.73□□□□□ -1.01
CDKL5-201ENST00000379989 KCNV1Q6PIU1 500 aa8.73□□□□□ -1.01
CDKL5-201ENST00000379989 PHACTR3Q96KR7 559 aa8.73□□□□□ -1.01
CDKL5-201ENST00000379989 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.73□□□□□ -1.01
CDKL5-201ENST00000379989 NEBLO76041 1014 aa8.73□□□□□ -1.01
CDKL5-201ENST00000379989 PAX7P23759 505 aa8.73□□□□□ -1.01
CDKL5-201ENST00000379989 CADPS2Q86UW7 1296 aa8.73□□□□□ -1.01
CDKL5-201ENST00000379989 PLA2G4DQ86XP0 818 aa8.73□□□□□ -1.01
CDKL5-201ENST00000379989 ITPRIPQ8IWB1 547 aa8.73□□□□□ -1.01
CDKL5-201ENST00000379989 TATDN2Q93075 761 aa8.73□□□□□ -1.01
CDKL5-201ENST00000379989 NBPF3Q9H094 633 aa8.73□□□□□ -1.01
CDKL5-201ENST00000379989 GNAT3A8MTJ3 354 aa8.73□□□□□ -1.01
CDKL5-201ENST00000379989 H3BQF6 201 aa8.73□□□□□ -1.01
CDKL5-201ENST00000379989 RRS1Q15050 365 aaKnown RBP8.73□□□□□ -1.01
CDKL5-201ENST00000379989 ZRSR1Q15695 479 aaKnown RBP8.73□□□□□ -1.01
CDKL5-201ENST00000379989 MICALL1Q8N3F8 863 aa8.73□□□□□ -1.01
CDKL5-201ENST00000379989 ABTB2Q8N961 1025 aa8.73□□□□□ -1.01
CDKL5-201ENST00000379989 KDM3BQ7LBC6 1761 aa8.72□□□□□ -1.01
CDKL5-201ENST00000379989 HNRNPH1P31943 449 aaKnown RBP8.72□□□□□ -1.01
CDKL5-201ENST00000379989 ZNF75DP51815 510 aa8.72□□□□□ -1.01
CDKL5-201ENST00000379989 IRX1P78414 480 aaPredicted RBP8.72□□□□□ -1.01
CDKL5-201ENST00000379989 RPAP2Q8IXW5 612 aaPredicted RBP8.72□□□□□ -1.01
CDKL5-201ENST00000379989 FAM200AQ8TCP9 573 aa8.72□□□□□ -1.01
CDKL5-201ENST00000379989 TMX3Q96JJ7 454 aa8.72□□□□□ -1.01
CDKL5-201ENST00000379989 PRDM16Q9HAZ2 1276 aa8.72□□□□□ -1.01
CDKL5-201ENST00000379989 TAOK2Q9UL54 1235 aa8.72□□□□□ -1.01
CDKL5-201ENST00000379989 NOB1Q9ULX3 412 aaKnown RBP8.72□□□□□ -1.01
CDKL5-201ENST00000379989 CEMIPQ8WUJ3 1361 aa8.72□□□□□ -1.01
CDKL5-201ENST00000379989 A0A087WUV0 522 aaPredicted RBP8.72□□□□□ -1.01
CDKL5-201ENST00000379989 CCT4P50991 539 aaKnown RBP8.72□□□□□ -1.01
CDKL5-201ENST00000379989 CPLX2Q6PUV4 134 aaKnown RBP8.72□□□□□ -1.01
CDKL5-201ENST00000379989 LUZP1Q86V48 1076 aa8.72□□□□□ -1.01
CDKL5-201ENST00000379989 GNL3LQ9NVN8 582 aaKnown RBP8.72□□□□□ -1.01
CDKL5-201ENST00000379989 TRMT1Q9NXH9 659 aaKnown RBP8.72□□□□□ -1.01
CDKL5-201ENST00000379989 TBC1D8BQ0IIM8 1120 aa8.71□□□□□ -1.01
CDKL5-201ENST00000379989 ARID5BQ14865 1188 aa8.71□□□□□ -1.01
CDKL5-201ENST00000379989 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.71□□□□□ -1.01
CDKL5-201ENST00000379989 LRRC8AQ8IWT6 810 aa8.71□□□□□ -1.01
CDKL5-201ENST00000379989 PRPF38AQ8NAV1 312 aaKnown RBP8.71□□□□□ -1.01
CDKL5-201ENST00000379989 FAM210AQ96ND0 272 aa8.71□□□□□ -1.01
CDKL5-201ENST00000379989 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.71□□□□□ -1.01
CDKL5-201ENST00000379989 RPAP1Q9BWH6 1393 aaPredicted RBP8.71□□□□□ -1.01
CDKL5-201ENST00000379989 CTAGE5O15320 804 aa8.71□□□□□ -1.02
CDKL5-201ENST00000379989 SGSM2O43147 1006 aa8.71□□□□□ -1.02
CDKL5-201ENST00000379989 HMOX1P09601 288 aa8.71□□□□□ -1.02
CDKL5-201ENST00000379989 GSPT1P15170 499 aaKnown RBP8.71□□□□□ -1.02
CDKL5-201ENST00000379989 CC2D1AQ6P1N0 951 aaPredicted RBP8.71□□□□□ -1.02
CDKL5-201ENST00000379989 STAG1Q8WVM7 1258 aa8.71□□□□□ -1.02
CDKL5-201ENST00000379989 TSR2Q969E8 191 aaKnown RBP8.71□□□□□ -1.02
CDKL5-201ENST00000379989 TACO1Q9BSH4 297 aaKnown RBP8.71□□□□□ -1.02
CDKL5-201ENST00000379989 CNPY2Q9Y2B0 182 aa8.71□□□□□ -1.02
CDKL5-201ENST00000379989 CPDO75976 1380 aa8.71□□□□□ -1.02
CDKL5-201ENST00000379989 PARP4Q9UKK3 1724 aaKnown RBP8.71□□□□□ -1.02
CDKL5-201ENST00000379989 CAND2O75155 1236 aa8.71□□□□□ -1.02
CDKL5-201ENST00000379989 UBE2HP62256 183 aa8.71□□□□□ -1.02
CDKL5-201ENST00000379989 JAKMIP3Q5VZ66 844 aa8.71□□□□□ -1.02
CDKL5-201ENST00000379989 CCAR2Q8N163 923 aaKnown RBP8.71□□□□□ -1.02
CDKL5-201ENST00000379989 GIMAP7Q8NHV1 300 aa8.71□□□□□ -1.02
CDKL5-201ENST00000379989 TRIM5Q9C035 493 aa8.71□□□□□ -1.02
CDKL5-201ENST00000379989 MKRN1Q9UHC7 482 aaKnown RBP8.71□□□□□ -1.02
CDKL5-201ENST00000379989 NPHP3Q7Z494 1330 aa8.71□□□□□ -1.02
CDKL5-201ENST00000379989 CRYBG1Q9Y4K1 1723 aa8.71□□□□□ -1.02
CDKL5-201ENST00000379989 ELF1P32519 619 aa8.7□□□□□ -1.02
CDKL5-201ENST00000379989 PSMD1Q99460 953 aa8.7□□□□□ -1.02
CDKL5-201ENST00000379989 EYA1Q99502 592 aa8.7□□□□□ -1.02
CDKL5-201ENST00000379989 ETAA1Q9NY74 926 aa8.7□□□□□ -1.02
CDKL5-201ENST00000379989 CLIP2Q9UDT6 1046 aa8.7□□□□□ -1.02
CDKL5-201ENST00000379989 CCDC192P0DO97 292 aa8.7□□□□□ -1.02
CDKL5-201ENST00000379989 CUL4AQ13619 759 aa8.7□□□□□ -1.02
CDKL5-201ENST00000379989 HSP90AB2PQ58FF8 381 aa8.7□□□□□ -1.02
CDKL5-201ENST00000379989 CCDC30Q5VVM6 783 aa8.7□□□□□ -1.02
CDKL5-201ENST00000379989 LRRC31Q6UY01 552 aa8.7□□□□□ -1.02
CDKL5-201ENST00000379989 GBP6Q6ZN66 633 aa8.7□□□□□ -1.02
CDKL5-201ENST00000379989 IPO7O95373 1038 aaKnown RBP8.7□□□□□ -1.02
CDKL5-201ENST00000379989 ANAPC15P60006 121 aa8.7□□□□□ -1.02
CDKL5-201ENST00000379989 ARHGEF25Q86VW2 580 aa8.7□□□□□ -1.02
CDKL5-201ENST00000379989 UBXN4Q92575 508 aa8.7□□□□□ -1.02
CDKL5-201ENST00000379989 ZRANB1Q9UGI0 708 aa8.7□□□□□ -1.02
CDKL5-201ENST00000379989 ZBTB7BO15156 539 aaPredicted RBP8.69□□□□□ -1.02
CDKL5-201ENST00000379989 HMMRO75330 724 aa8.69□□□□□ -1.02
CDKL5-201ENST00000379989 ERCC3P19447 782 aa8.69□□□□□ -1.02
CDKL5-201ENST00000379989 CCT2P78371 535 aaKnown RBP8.69□□□□□ -1.02
CDKL5-201ENST00000379989 ADCY2Q08462 1091 aa8.69□□□□□ -1.02
CDKL5-201ENST00000379989 TAF7Q15545 349 aaPredicted RBP8.69□□□□□ -1.02
CDKL5-201ENST00000379989 JPH2Q9BR39 696 aaPredicted RBP8.69□□□□□ -1.02
CDKL5-201ENST00000379989 FUT8Q9BYC5 575 aa8.69□□□□□ -1.02
CDKL5-201ENST00000379989 NUCKS1Q9H1E3 243 aaKnown RBP8.69□□□□□ -1.02
CDKL5-201ENST00000379989 A1CFQ9NQ94 594 aaKnown RBP8.69□□□□□ -1.02
CDKL5-201ENST00000379989 IRAK4Q9NWZ3 460 aa8.69□□□□□ -1.02
CDKL5-201ENST00000379989 NCKAP5LQ9HCH0 1330 aa8.69□□□□□ -1.02
CDKL5-201ENST00000379989 ERLIN2O94905 339 aa8.69□□□□□ -1.02
CDKL5-201ENST00000379989 SKILP12757 684 aa8.69□□□□□ -1.02
CDKL5-201ENST00000379989 AKAP4Q5JQC9 854 aa8.69□□□□□ -1.02
CDKL5-201ENST00000379989 PROSER2Q86WR7 435 aaPredicted RBP8.69□□□□□ -1.02
CDKL5-201ENST00000379989 TEX11Q8IYF3 940 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms