RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 ATG3Q9NT62 314 aa8.85□□□□□ -0.99
GPCPD1-201ENST00000379019 RPS6KA4O75676 772 aa8.85□□□□□ -0.99
GPCPD1-201ENST00000379019 PIP4K2AP48426 406 aaPredicted RBP8.85□□□□□ -0.99
GPCPD1-201ENST00000379019 TTC5Q8N0Z6 440 aa8.85□□□□□ -0.99
GPCPD1-201ENST00000379019 ANKRD7Q92527 254 aa8.85□□□□□ -0.99
GPCPD1-201ENST00000379019 MTMR6Q9Y217 621 aa8.85□□□□□ -0.99
GPCPD1-201ENST00000379019 KDM3BQ7LBC6 1761 aa8.85□□□□□ -0.99
GPCPD1-201ENST00000379019 STARD3NLO95772 234 aa8.85□□□□□ -0.99
GPCPD1-201ENST00000379019 GTF2F1P35269 517 aaKnown RBP eCLIP8.85□□□□□ -0.99
GPCPD1-201ENST00000379019 ZNF589Q86UQ0 364 aaPredicted RBP8.85□□□□□ -0.99
GPCPD1-201ENST00000379019 OSBPL3Q9H4L5 887 aa8.85□□□□□ -0.99
GPCPD1-201ENST00000379019 CAPN2P17655 700 aa8.85□□□□□ -0.99
GPCPD1-201ENST00000379019 R3HDM1Q15032 1099 aaKnown RBP8.85□□□□□ -0.99
GPCPD1-201ENST00000379019 CCDC94Q9BW85 323 aaPredicted RBP8.85□□□□□ -0.99
GPCPD1-201ENST00000379019 HYPKQ9NX55 129 aa8.85□□□□□ -0.99
GPCPD1-201ENST00000379019 DENND2AQ9ULE3 1009 aa8.85□□□□□ -0.99
GPCPD1-201ENST00000379019 CD2APQ9Y5K6 639 aa8.85□□□□□ -0.99
GPCPD1-201ENST00000379019 MRVI1Q9Y6F6 885 aa8.85□□□□□ -0.99
GPCPD1-201ENST00000379019 UBE2Q2LH0YL09 131 aa8.84□□□□□ -0.99
GPCPD1-201ENST00000379019 CT47B1P0C2W7 299 aaPredicted RBP8.84□□□□□ -0.99
GPCPD1-201ENST00000379019 LGR6Q9HBX8 967 aa8.84□□□□□ -0.99
GPCPD1-201ENST00000379019 MYO15AQ9UKN7 3530 aa8.84□□□□□ -0.99
GPCPD1-201ENST00000379019 JAK2O60674 1132 aa8.84□□□□□ -0.99
GPCPD1-201ENST00000379019 NR1I2O75469 434 aa8.84□□□□□ -0.99
GPCPD1-201ENST00000379019 HOXB7P09629 217 aa8.84□□□□□ -0.99
GPCPD1-201ENST00000379019 CWC27Q6UX04 472 aaKnown RBP8.84□□□□□ -0.99
GPCPD1-201ENST00000379019 NLGN1Q8N2Q7 840 aa8.84□□□□□ -0.99
GPCPD1-201ENST00000379019 N4BP2Q86UW6 1770 aaPredicted RBP8.84□□□□□ -0.99
GPCPD1-201ENST00000379019 GOLGA8FQ08AF8 430 aa8.84□□□□□ -0.99
GPCPD1-201ENST00000379019 GOLGA8DPQ0D2H9 430 aa8.84□□□□□ -0.99
GPCPD1-201ENST00000379019 CCDC83Q8IWF9 413 aa8.84□□□□□ -0.99
GPCPD1-201ENST00000379019 C16orf45Q96MC5 204 aaPredicted RBP8.84□□□□□ -0.99
GPCPD1-201ENST00000379019 FMNL2Q96PY5 1086 aa8.84□□□□□ -0.99
GPCPD1-201ENST00000379019 ERC2O15083 957 aa8.84□□□□□ -0.99
GPCPD1-201ENST00000379019 PLCB2Q00722 1185 aa8.84□□□□□ -0.99
GPCPD1-201ENST00000379019 SASS6Q6UVJ0 657 aa8.84□□□□□ -0.99
GPCPD1-201ENST00000379019 MKI67P46013 3256 aaKnown RBP8.84□□□□□ -0.99
GPCPD1-201ENST00000379019 SLFN14P0C7P3 912 aa8.84□□□□□ -1
GPCPD1-201ENST00000379019 HSPA4P34932 840 aa8.84□□□□□ -1
GPCPD1-201ENST00000379019 RTCBQ9Y3I0 505 aaKnown RBP8.84□□□□□ -1
GPCPD1-201ENST00000379019 PNPLA7Q6ZV29 1317 aa8.83□□□□□ -1
GPCPD1-201ENST00000379019 MPRIPQ6WCQ1 1025 aa8.83□□□□□ -1
GPCPD1-201ENST00000379019 KMT5BQ4FZB7 885 aa8.83□□□□□ -1
GPCPD1-201ENST00000379019 C11orf57Q6ZUT1 292 aaPredicted RBP8.83□□□□□ -1
GPCPD1-201ENST00000379019 LRRC2Q9BYS8 371 aa8.83□□□□□ -1
GPCPD1-201ENST00000379019 TFCP2L1Q9NZI6 479 aa8.83□□□□□ -1
GPCPD1-201ENST00000379019 HEG1Q9ULI3 1381 aa8.83□□□□□ -1
GPCPD1-201ENST00000379019 SCN7AQ01118 1682 aa8.83□□□□□ -1
GPCPD1-201ENST00000379019 KIF13BQ9NQT8 1826 aa8.83□□□□□ -1
GPCPD1-201ENST00000379019 GPHNQ9NQX3 736 aaPredicted RBP8.83□□□□□ -1
GPCPD1-201ENST00000379019 ATP6V1AP38606 617 aa8.83□□□□□ -1
GPCPD1-201ENST00000379019 KCTD19Q17RG1 926 aaPredicted RBP8.83□□□□□ -1
GPCPD1-201ENST00000379019 FAM182BQ5T319 152 aa8.83□□□□□ -1
GPCPD1-201ENST00000379019 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.83□□□□□ -1
GPCPD1-201ENST00000379019 MX1P20591 662 aa8.82□□□□□ -1
GPCPD1-201ENST00000379019 SKOR2Q2VWA4 1001 aaPredicted RBP8.82□□□□□ -1
GPCPD1-201ENST00000379019 CTIFO43310 598 aaKnown RBP8.82□□□□□ -1
GPCPD1-201ENST00000379019 KDM4AO75164 1064 aa8.82□□□□□ -1
GPCPD1-201ENST00000379019 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.82□□□□□ -1
GPCPD1-201ENST00000379019 TRERF1Q96PN7 1200 aa8.82□□□□□ -1
GPCPD1-201ENST00000379019 PPP1R1BQ9UD71 204 aaPredicted RBP8.82□□□□□ -1
GPCPD1-201ENST00000379019 RIC1Q4ADV7 1423 aa8.82□□□□□ -1
GPCPD1-201ENST00000379019 DYNC1I1O14576 645 aa8.82□□□□□ -1
GPCPD1-201ENST00000379019 TAF7Q15545 349 aaPredicted RBP8.82□□□□□ -1
GPCPD1-201ENST00000379019 CCDC87Q9NVE4 849 aa8.82□□□□□ -1
GPCPD1-201ENST00000379019 TRAPPC3LQ5T215 181 aa8.82□□□□□ -1
GPCPD1-201ENST00000379019 GOLPH3LQ9H4A5 285 aa8.82□□□□□ -1
GPCPD1-201ENST00000379019 CTNNA3Q9UI47 895 aa8.82□□□□□ -1
GPCPD1-201ENST00000379019 SGIP1Q9BQI5 828 aa8.81□□□□□ -1
GPCPD1-201ENST00000379019 TRIM6-TRIM34B2RNG4 842 aa8.81□□□□□ -1
GPCPD1-201ENST00000379019 NPHP1O15259 732 aa8.81□□□□□ -1
GPCPD1-201ENST00000379019 NBPF11Q86T75 865 aa8.81□□□□□ -1
GPCPD1-201ENST00000379019 TSPY26PQ9H489 355 aa8.81□□□□□ -1
GPCPD1-201ENST00000379019 C4AP0C0L4 1744 aa8.81□□□□□ -1
GPCPD1-201ENST00000379019 A0A0D9SFI3 127 aa8.81□□□□□ -1
GPCPD1-201ENST00000379019 IPO8O15397 1037 aaKnown RBP8.81□□□□□ -1
GPCPD1-201ENST00000379019 BCORQ6W2J9 1755 aa8.81□□□□□ -1
GPCPD1-201ENST00000379019 ADD1P35611 737 aaKnown RBP8.81□□□□□ -1
GPCPD1-201ENST00000379019 TOB2Q14106 344 aaPredicted RBP8.81□□□□□ -1
GPCPD1-201ENST00000379019 CWF19L2Q2TBE0 894 aaKnown RBP8.81□□□□□ -1
GPCPD1-201ENST00000379019 LRRC4BQ9NT99 713 aa8.81□□□□□ -1
GPCPD1-201ENST00000379019 ISY1Q9ULR0 285 aaKnown RBP8.81□□□□□ -1
GPCPD1-201ENST00000379019 IL6STP40189 918 aaPredicted RBP8.8□□□□□ -1
GPCPD1-201ENST00000379019 FOSBP53539 338 aa8.8□□□□□ -1
GPCPD1-201ENST00000379019 PPP1R42Q7Z4L9 355 aa8.8□□□□□ -1
GPCPD1-201ENST00000379019 NRXN2Q9P2S2 1712 aa8.8□□□□□ -1
GPCPD1-201ENST00000379019 GNAI1P63096 354 aa8.8□□□□□ -1
GPCPD1-201ENST00000379019 EPHA10Q5JZY3 1008 aa8.8□□□□□ -1
GPCPD1-201ENST00000379019 CCDC129Q6ZRS4 1044 aa8.8□□□□□ -1
GPCPD1-201ENST00000379019 CCDC186Q7Z3E2 898 aa8.8□□□□□ -1
GPCPD1-201ENST00000379019 SMAP1Q8IYB5 467 aaPredicted RBP8.8□□□□□ -1
GPCPD1-201ENST00000379019 FBXW7Q969H0 707 aa8.8□□□□□ -1
GPCPD1-201ENST00000379019 HSD3B7Q9H2F3 369 aa8.8□□□□□ -1
GPCPD1-201ENST00000379019 PXDNLA1KZ92 1463 aa8.8□□□□□ -1
GPCPD1-201ENST00000379019 SGSM2O43147 1006 aa8.8□□□□□ -1
GPCPD1-201ENST00000379019 SNRPA1P09661 255 aaKnown RBP8.8□□□□□ -1
GPCPD1-201ENST00000379019 FLIIQ13045 1269 aa8.8□□□□□ -1
GPCPD1-201ENST00000379019 ZNF827Q17R98 1081 aa8.8□□□□□ -1
GPCPD1-201ENST00000379019 ZCCHC17Q9NP64 241 aaKnown RBP8.8□□□□□ -1
GPCPD1-201ENST00000379019 GJB2P29033 226 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms