RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 PHF14O94880 888 aa21■□□□□ 0.95
THUMPD2-201ENST00000378727 MCCP23508 829 aa21■□□□□ 0.95
THUMPD2-201ENST00000378727 ATP2B3Q16720 1220 aa21■□□□□ 0.95
THUMPD2-201ENST00000378727 C3orf67Q6ZVT6 689 aa21■□□□□ 0.95
THUMPD2-201ENST00000378727 SLKQ9H2G2 1235 aaPredicted RBP21■□□□□ 0.95
THUMPD2-201ENST00000378727 SNRKQ9NRH2 765 aa21■□□□□ 0.95
THUMPD2-201ENST00000378727 ANAPC15P60006 121 aa21■□□□□ 0.95
THUMPD2-201ENST00000378727 RFX7Q2KHR2 1363 aa21■□□□□ 0.95
THUMPD2-201ENST00000378727 TRAPPC3LQ5T215 181 aa21■□□□□ 0.95
THUMPD2-201ENST00000378727 DDX46Q7L014 1031 aaKnown RBP21■□□□□ 0.95
THUMPD2-201ENST00000378727 SPRYD3Q8NCJ5 442 aa21■□□□□ 0.95
THUMPD2-201ENST00000378727 ABCC12Q96J65 1359 aa20.99■□□□□ 0.95
THUMPD2-201ENST00000378727 PDE8BO95263 885 aa20.99■□□□□ 0.95
THUMPD2-201ENST00000378727 SLC27A3Q5K4L6 730 aa20.99■□□□□ 0.95
THUMPD2-201ENST00000378727 KIAA1211Q6ZU35 1233 aa20.99■□□□□ 0.95
THUMPD2-201ENST00000378727 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.99■□□□□ 0.95
THUMPD2-201ENST00000378727 SETDB2Q96T68 719 aa20.99■□□□□ 0.95
THUMPD2-201ENST00000378727 IFIT1P09914 478 aaKnown RBP20.98■□□□□ 0.95
THUMPD2-201ENST00000378727 PTH1RQ03431 593 aa20.98■□□□□ 0.95
THUMPD2-201ENST00000378727 SLC10A5Q5PT55 438 aa20.98■□□□□ 0.95
THUMPD2-201ENST00000378727 PAG1Q9NWQ8 432 aa20.98■□□□□ 0.95
THUMPD2-201ENST00000378727 MROH5Q6ZUA9 1318 aa20.98■□□□□ 0.95
THUMPD2-201ENST00000378727 K7ELQ4 463 aaPredicted RBP20.98■□□□□ 0.95
THUMPD2-201ENST00000378727 RFC4P35249 363 aa20.98■□□□□ 0.95
THUMPD2-201ENST00000378727 KBTBD3Q8NAB2 608 aa20.98■□□□□ 0.95
THUMPD2-201ENST00000378727 MED23Q9ULK4 1368 aa20.97■□□□□ 0.95
THUMPD2-201ENST00000378727 GOLIM4O00461 696 aa20.97■□□□□ 0.95
THUMPD2-201ENST00000378727 CHGBP05060 677 aa20.97■□□□□ 0.95
THUMPD2-201ENST00000378727 SF3B3Q15393 1217 aaKnown RBP20.97■□□□□ 0.95
THUMPD2-201ENST00000378727 CCDC158Q5M9N0 1113 aa20.97■□□□□ 0.95
THUMPD2-201ENST00000378727 TAF1P21675 1872 aa20.97■□□□□ 0.95
THUMPD2-201ENST00000378727 TTC39AQ5SRH9 613 aa20.97■□□□□ 0.95
THUMPD2-201ENST00000378727 GORABQ5T7V8 394 aa20.97■□□□□ 0.95
THUMPD2-201ENST00000378727 HELBQ8NG08 1087 aaPredicted RBP20.97■□□□□ 0.95
THUMPD2-201ENST00000378727 MPHOSPH8Q99549 860 aa20.97■□□□□ 0.95
THUMPD2-201ENST00000378727 ARAP2Q8WZ64 1704 aa20.96■□□□□ 0.95
THUMPD2-201ENST00000378727 PROM2Q8N271 834 aa20.96■□□□□ 0.95
THUMPD2-201ENST00000378727 NYXQ9GZU5 481 aa20.96■□□□□ 0.95
THUMPD2-201ENST00000378727 CCDC171Q6TFL3 1326 aa20.95■□□□□ 0.95
THUMPD2-201ENST00000378727 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.95■□□□□ 0.94
THUMPD2-201ENST00000378727 ADRA2BP18089 450 aa20.95■□□□□ 0.94
THUMPD2-201ENST00000378727 FGFR2P21802 821 aa20.95■□□□□ 0.94
THUMPD2-201ENST00000378727 SCARF1Q14162 830 aa20.95■□□□□ 0.94
THUMPD2-201ENST00000378727 NBPF5PQ86XG9 351 aaPredicted RBP20.95■□□□□ 0.94
THUMPD2-201ENST00000378727 AKAP11Q9UKA4 1901 aa20.95■□□□□ 0.94
THUMPD2-201ENST00000378727 GTF2E1P29083 439 aaPredicted RBP20.95■□□□□ 0.94
THUMPD2-201ENST00000378727 ZNF589Q86UQ0 364 aaPredicted RBP20.95■□□□□ 0.94
THUMPD2-201ENST00000378727 IGHMBP2P38935 993 aaKnown RBP20.94■□□□□ 0.94
THUMPD2-201ENST00000378727 PUM3Q15397 648 aaKnown RBP20.94■□□□□ 0.94
THUMPD2-201ENST00000378727 TXNRD1Q16881 649 aa20.93■□□□□ 0.94
THUMPD2-201ENST00000378727 RASEFQ8IZ41 740 aa20.93■□□□□ 0.94
THUMPD2-201ENST00000378727 SNX14Q9Y5W7 946 aa20.93■□□□□ 0.94
THUMPD2-201ENST00000378727 ST18O60284 1047 aa20.93■□□□□ 0.94
THUMPD2-201ENST00000378727 RXRBP28702 533 aa20.93■□□□□ 0.94
THUMPD2-201ENST00000378727 MAP4K1Q92918 833 aa20.93■□□□□ 0.94
THUMPD2-201ENST00000378727 TAF5LO75529 589 aa20.92■□□□□ 0.94
THUMPD2-201ENST00000378727 NEK4P51957 841 aa20.92■□□□□ 0.94
THUMPD2-201ENST00000378727 FKBP4Q02790 459 aaKnown RBP eCLIP20.92■□□□□ 0.94
THUMPD2-201ENST00000378727 TPTE2Q6XPS3 522 aa20.92■□□□□ 0.94
THUMPD2-201ENST00000378727 LPIN2Q92539 896 aa20.92■□□□□ 0.94
THUMPD2-201ENST00000378727 CDC5LQ99459 802 aaKnown RBP20.92■□□□□ 0.94
THUMPD2-201ENST00000378727 A0A1B0GUL6 1792 aa20.92■□□□□ 0.94
THUMPD2-201ENST00000378727 SNAP23O00161 211 aa20.92■□□□□ 0.94
THUMPD2-201ENST00000378727 NFIXQ14938 502 aa20.92■□□□□ 0.94
THUMPD2-201ENST00000378727 PI16Q6UXB8 463 aa20.92■□□□□ 0.94
THUMPD2-201ENST00000378727 TICAM2Q86XR7 235 aa20.92■□□□□ 0.94
THUMPD2-201ENST00000378727 CCDC24Q8N4L8 307 aa20.92■□□□□ 0.94
THUMPD2-201ENST00000378727 ZNF512BQ96KM6 892 aaPredicted RBP20.92■□□□□ 0.94
THUMPD2-201ENST00000378727 SEC62Q99442 399 aaKnown RBP20.92■□□□□ 0.94
THUMPD2-201ENST00000378727 DDIT3P35638 169 aa20.91■□□□□ 0.94
THUMPD2-201ENST00000378727 MCAMP43121 646 aa20.91■□□□□ 0.94
THUMPD2-201ENST00000378727 NBR1Q14596 966 aa20.91■□□□□ 0.94
THUMPD2-201ENST00000378727 NECTIN1Q15223 517 aa20.91■□□□□ 0.94
THUMPD2-201ENST00000378727 SLFNL1Q499Z3 407 aa20.91■□□□□ 0.94
THUMPD2-201ENST00000378727 KCNB2Q92953 911 aa20.91■□□□□ 0.94
THUMPD2-201ENST00000378727 RGS17Q9UGC6 210 aaPredicted RBP20.91■□□□□ 0.94
THUMPD2-201ENST00000378727 SSFA2P28290 1259 aa20.9■□□□□ 0.94
THUMPD2-201ENST00000378727 ZAP70P43403 619 aa20.9■□□□□ 0.94
THUMPD2-201ENST00000378727 RBM8AQ9Y5S9 174 aaKnown RBP20.9■□□□□ 0.94
THUMPD2-201ENST00000378727 CARMIL3Q8ND23 1372 aa20.9■□□□□ 0.94
THUMPD2-201ENST00000378727 TNRC6CQ9HCJ0 1690 aaKnown RBP20.9■□□□□ 0.94
THUMPD2-201ENST00000378727 PHKA1P46020 1223 aa20.9■□□□□ 0.94
THUMPD2-201ENST00000378727 CHRNDQ07001 517 aa20.9■□□□□ 0.94
THUMPD2-201ENST00000378727 CCDC102BQ68D86 513 aa20.9■□□□□ 0.94
THUMPD2-201ENST00000378727 PRPF40BQ6NWY9 871 aaKnown RBP20.9■□□□□ 0.94
THUMPD2-201ENST00000378727 ANKRD18AQ8IVF6 992 aa20.9■□□□□ 0.94
THUMPD2-201ENST00000378727 GYS1P13807 737 aa20.89■□□□□ 0.93
THUMPD2-201ENST00000378727 MCMDC2Q4G0Z9 681 aa20.89■□□□□ 0.93
THUMPD2-201ENST00000378727 CCDC129Q6ZRS4 1044 aa20.89■□□□□ 0.93
THUMPD2-201ENST00000378727 NLRP3Q96P20 1036 aa20.89■□□□□ 0.93
THUMPD2-201ENST00000378727 UPF3BQ9BZI7 483 aaKnown RBP20.89■□□□□ 0.93
THUMPD2-201ENST00000378727 PLSCR1O15162 318 aa20.89■□□□□ 0.93
THUMPD2-201ENST00000378727 SLC5A1P13866 664 aa20.89■□□□□ 0.93
THUMPD2-201ENST00000378727 ARID4AP29374 1257 aaPredicted RBP20.89■□□□□ 0.93
THUMPD2-201ENST00000378727 ZMYM1Q5SVZ6 1142 aa20.89■□□□□ 0.93
THUMPD2-201ENST00000378727 CELF1Q92879 486 aaKnown RBP20.89■□□□□ 0.93
THUMPD2-201ENST00000378727 BSDC1Q9NW68 430 aaPredicted RBP20.88■□□□□ 0.93
THUMPD2-201ENST00000378727 RNF113AO15541 343 aaKnown RBP20.87■□□□□ 0.93
THUMPD2-201ENST00000378727 HELLSQ9NRZ9 838 aa20.87■□□□□ 0.93
THUMPD2-201ENST00000378727 MYH7P12883 1935 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms