RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 ALS2CR12Q96Q35 445 aa16.61■□□□□ 0.25
PRDM16-203ENST00000378391 ABCC1P33527 1531 aa16.61■□□□□ 0.25
PRDM16-203ENST00000378391 RIMS2Q9UQ26 1411 aa16.61■□□□□ 0.25
PRDM16-203ENST00000378391 MPRIPQ6WCQ1 1025 aa16.61■□□□□ 0.25
PRDM16-203ENST00000378391 ZNF622Q969S3 477 aaKnown RBP eCLIP16.61■□□□□ 0.25
PRDM16-203ENST00000378391 POTEJP0CG39 1038 aa16.61■□□□□ 0.25
PRDM16-203ENST00000378391 DNM1Q05193 864 aaKnown RBP16.61■□□□□ 0.25
PRDM16-203ENST00000378391 IFFO1Q0D2I5 559 aa16.61■□□□□ 0.25
PRDM16-203ENST00000378391 MAP3K2Q9Y2U5 619 aa16.61■□□□□ 0.25
PRDM16-203ENST00000378391 POLR3DP05423 398 aaPredicted RBP16.61■□□□□ 0.25
PRDM16-203ENST00000378391 TMEM266Q2M3C6 531 aa16.61■□□□□ 0.25
PRDM16-203ENST00000378391 RANBP6O60518 1105 aaKnown RBP16.6■□□□□ 0.25
PRDM16-203ENST00000378391 TTF1Q15361 905 aaPredicted RBP16.6■□□□□ 0.25
PRDM16-203ENST00000378391 TDRD12Q587J7 1177 aaKnown RBP16.6■□□□□ 0.25
PRDM16-203ENST00000378391 NCOA7Q8NI08 942 aa16.6■□□□□ 0.25
PRDM16-203ENST00000378391 CCDC12Q8WUD4 166 aaPredicted RBP16.6■□□□□ 0.25
PRDM16-203ENST00000378391 CD109Q6YHK3 1445 aa16.6■□□□□ 0.25
PRDM16-203ENST00000378391 NLRP5P59047 1200 aa16.6■□□□□ 0.25
PRDM16-203ENST00000378391 ANO6Q4KMQ2 910 aa16.6■□□□□ 0.25
PRDM16-203ENST00000378391 CATIPQ7Z7H3 387 aa16.6■□□□□ 0.25
PRDM16-203ENST00000378391 KCNG4Q8TDN1 519 aa16.6■□□□□ 0.25
PRDM16-203ENST00000378391 BRD1O95696 1058 aa16.6■□□□□ 0.25
PRDM16-203ENST00000378391 EHBP1Q8NDI1 1231 aa16.6■□□□□ 0.25
PRDM16-203ENST00000378391 CLTCL1P53675 1640 aa16.6■□□□□ 0.25
PRDM16-203ENST00000378391 SLC5A1P13866 664 aa16.6■□□□□ 0.25
PRDM16-203ENST00000378391 FBXO31Q5XUX0 539 aaPredicted RBP16.6■□□□□ 0.25
PRDM16-203ENST00000378391 BRF1Q92994 677 aa16.6■□□□□ 0.25
PRDM16-203ENST00000378391 GTPBP4Q9BZE4 634 aaKnown RBP16.6■□□□□ 0.25
PRDM16-203ENST00000378391 MTIF2P46199 727 aaKnown RBP16.6■□□□□ 0.25
PRDM16-203ENST00000378391 SEPT14Q6ZU15 432 aa16.6■□□□□ 0.25
PRDM16-203ENST00000378391 ATP8B2P98198 1209 aa16.59■□□□□ 0.25
PRDM16-203ENST00000378391 USHBP1Q8N6Y0 703 aa16.59■□□□□ 0.25
PRDM16-203ENST00000378391 DESP17661 470 aa16.59■□□□□ 0.25
PRDM16-203ENST00000378391 SYKP43405 635 aa16.59■□□□□ 0.25
PRDM16-203ENST00000378391 UBASH3AP57075 661 aa16.59■□□□□ 0.25
PRDM16-203ENST00000378391 AMPD3Q01432 767 aa16.59■□□□□ 0.25
PRDM16-203ENST00000378391 ZSCAN29Q8IWY8 852 aaPredicted RBP16.59■□□□□ 0.25
PRDM16-203ENST00000378391 DACT1Q9NYF0 836 aa16.59■□□□□ 0.25
PRDM16-203ENST00000378391 ZNF652Q9Y2D9 606 aa16.59■□□□□ 0.25
PRDM16-203ENST00000378391 LMAN1P49257 510 aa16.59■□□□□ 0.25
PRDM16-203ENST00000378391 AK2P54819 239 aa16.59■□□□□ 0.25
PRDM16-203ENST00000378391 NECAB1Q8N987 351 aa16.59■□□□□ 0.25
PRDM16-203ENST00000378391 ARFGAP3Q9NP61 516 aa16.59■□□□□ 0.25
PRDM16-203ENST00000378391 SHROOM2Q13796 1616 aa16.58■□□□□ 0.25
PRDM16-203ENST00000378391 METAP2P50579 478 aaKnown RBP eCLIP16.58■□□□□ 0.25
PRDM16-203ENST00000378391 TMEM67Q5HYA8 995 aa16.58■□□□□ 0.25
PRDM16-203ENST00000378391 SPECC1Q5M775 1068 aa16.58■□□□□ 0.25
PRDM16-203ENST00000378391 SRRTQ9BXP5 876 aaKnown RBP16.58■□□□□ 0.25
PRDM16-203ENST00000378391 TCP11L1Q9NUJ3 509 aa16.58■□□□□ 0.25
PRDM16-203ENST00000378391 ANKRD18BA2A2Z9 1011 aa16.58■□□□□ 0.24
PRDM16-203ENST00000378391 IL13P35225 146 aa16.58■□□□□ 0.24
PRDM16-203ENST00000378391 CCDC178Q5BJE1 867 aa16.58■□□□□ 0.24
PRDM16-203ENST00000378391 SIRT2Q8IXJ6 389 aa16.58■□□□□ 0.24
PRDM16-203ENST00000378391 MRPS27Q92552 414 aaKnown RBP16.58■□□□□ 0.24
PRDM16-203ENST00000378391 CCDC113Q9H0I3 377 aa16.58■□□□□ 0.24
PRDM16-203ENST00000378391 GIGYF2Q6Y7W6 1299 aaKnown RBP16.57■□□□□ 0.24
PRDM16-203ENST00000378391 TMOD3Q9NYL9 352 aa16.57■□□□□ 0.24
PRDM16-203ENST00000378391 KIF24Q5T7B8 1368 aa16.57■□□□□ 0.24
PRDM16-203ENST00000378391 GCOM1H8Y6P7 765 aaPredicted RBP16.57■□□□□ 0.24
PRDM16-203ENST00000378391 MYZAPP0CAP1 466 aa16.57■□□□□ 0.24
PRDM16-203ENST00000378391 SMC1AQ14683 1233 aaKnown RBP16.57■□□□□ 0.24
PRDM16-203ENST00000378391 ZNF444Q8N0Y2 327 aaPredicted RBP16.57■□□□□ 0.24
PRDM16-203ENST00000378391 TSC1Q92574 1164 aa16.57■□□□□ 0.24
PRDM16-203ENST00000378391 RBM8AQ9Y5S9 174 aaKnown RBP16.57■□□□□ 0.24
PRDM16-203ENST00000378391 N4BP3O15049 544 aa16.57■□□□□ 0.24
PRDM16-203ENST00000378391 RBM5P52756 815 aaKnown RBP eCLIP16.57■□□□□ 0.24
PRDM16-203ENST00000378391 TMX1Q9H3N1 280 aa16.57■□□□□ 0.24
PRDM16-203ENST00000378391 UBA7P41226 1012 aa16.56■□□□□ 0.24
PRDM16-203ENST00000378391 HLTFQ14527 1009 aaKnown RBP eCLIP16.56■□□□□ 0.24
PRDM16-203ENST00000378391 MICU3Q86XE3 530 aa16.56■□□□□ 0.24
PRDM16-203ENST00000378391 SYT1P21579 422 aa16.56■□□□□ 0.24
PRDM16-203ENST00000378391 EIF4A2Q14240 407 aaKnown RBP16.56■□□□□ 0.24
PRDM16-203ENST00000378391 KIF2CQ99661 725 aa16.56■□□□□ 0.24
PRDM16-203ENST00000378391 PHF8Q9UPP1 1060 aa16.56■□□□□ 0.24
PRDM16-203ENST00000378391 NLRP1Q9C000 1473 aa16.56■□□□□ 0.24
PRDM16-203ENST00000378391 PTGS1P23219 599 aa16.56■□□□□ 0.24
PRDM16-203ENST00000378391 RNF187Q5TA31 235 aaPredicted RBP16.56■□□□□ 0.24
PRDM16-203ENST00000378391 CTAGE1Q96RT6 745 aa16.56■□□□□ 0.24
PRDM16-203ENST00000378391 NPHP3Q7Z494 1330 aa16.56■□□□□ 0.24
PRDM16-203ENST00000378391 CDC42BPBQ9Y5S2 1711 aa16.56■□□□□ 0.24
PRDM16-203ENST00000378391 SLU7O95391 586 aaKnown RBP16.56■□□□□ 0.24
PRDM16-203ENST00000378391 BMP15O95972 392 aa16.56■□□□□ 0.24
PRDM16-203ENST00000378391 FAM184BQ9ULE4 1060 aa16.56■□□□□ 0.24
PRDM16-203ENST00000378391 MAP3K4Q9Y6R4 1608 aa16.56■□□□□ 0.24
PRDM16-203ENST00000378391 POGZQ7Z3K3 1410 aa16.56■□□□□ 0.24
PRDM16-203ENST00000378391 KIF5BP33176 963 aa16.56■□□□□ 0.24
PRDM16-203ENST00000378391 SPAG1Q07617 926 aa16.56■□□□□ 0.24
PRDM16-203ENST00000378391 ZMAT2Q96NC0 199 aaKnown RBP16.56■□□□□ 0.24
PRDM16-203ENST00000378391 TRMT112Q9UI30 125 aaKnown RBP16.56■□□□□ 0.24
PRDM16-203ENST00000378391 DNAI1Q9UI46 699 aa16.56■□□□□ 0.24
PRDM16-203ENST00000378391 ZFYP08048 801 aaPredicted RBP16.55■□□□□ 0.24
PRDM16-203ENST00000378391 ISM2Q6H9L7 571 aa16.55■□□□□ 0.24
PRDM16-203ENST00000378391 TAOK3Q9H2K8 898 aa16.55■□□□□ 0.24
PRDM16-203ENST00000378391 CCDC175P0C221 793 aa16.55■□□□□ 0.24
PRDM16-203ENST00000378391 KIF1BO60333 1816 aa16.55■□□□□ 0.24
PRDM16-203ENST00000378391 UBE3BQ7Z3V4 1068 aa16.55■□□□□ 0.24
PRDM16-203ENST00000378391 CALML4Q96GE6 196 aa16.55■□□□□ 0.24
PRDM16-203ENST00000378391 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.55■□□□□ 0.24
PRDM16-203ENST00000378391 G2E3Q7L622 706 aa16.55■□□□□ 0.24
PRDM16-203ENST00000378391 DAAM2Q86T65 1068 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms