RNA–Protein interactions for RNA: ENST00000378045.4

FUNDC1-201, Transcript of FUN14 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FUNDC1, Length 1,196 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FUNDC1-201ENST00000378045 CTSWP56202 376 aa16.34■□□□□ 0.21
FUNDC1-201ENST00000378045 NEXNQ0ZGT2 675 aa16.34■□□□□ 0.21
FUNDC1-201ENST00000378045 TMC4Q7Z404 712 aa16.34■□□□□ 0.21
FUNDC1-201ENST00000378045 TRPM4Q8TD43 1214 aa16.34■□□□□ 0.21
FUNDC1-201ENST00000378045 ANKIB1Q9P2G1 1089 aa16.34■□□□□ 0.21
FUNDC1-201ENST00000378045 F6X3S4 739 aa16.33■□□□□ 0.2
FUNDC1-201ENST00000378045 PSMD14O00487 310 aa16.33■□□□□ 0.2
FUNDC1-201ENST00000378045 ECE2O60344 883 aa16.33■□□□□ 0.2
FUNDC1-201ENST00000378045 TBC1D16Q8TBP0 767 aa16.33■□□□□ 0.2
FUNDC1-201ENST00000378045 GREM2Q9H772 168 aa16.33■□□□□ 0.2
FUNDC1-201ENST00000378045 TRPM7Q96QT4 1865 aa16.33■□□□□ 0.2
FUNDC1-201ENST00000378045 WTIPA6NIX2 430 aaPredicted RBP16.32■□□□□ 0.2
FUNDC1-201ENST00000378045 TMEM88BA6NKF7 163 aa16.32■□□□□ 0.2
FUNDC1-201ENST00000378045 CACNA1FO60840 1977 aa16.32■□□□□ 0.2
FUNDC1-201ENST00000378045 VAMP4O75379 141 aa16.32■□□□□ 0.2
FUNDC1-201ENST00000378045 CNTNAP1P78357 1384 aa16.32■□□□□ 0.2
FUNDC1-201ENST00000378045 WDR63Q8IWG1 891 aa16.32■□□□□ 0.2
FUNDC1-201ENST00000378045 CDHR2Q9BYE9 1310 aa16.32■□□□□ 0.2
FUNDC1-201ENST00000378045 ADARB2Q9NS39 739 aaKnown RBP16.32■□□□□ 0.2
FUNDC1-201ENST00000378045 RTL9Q8NET4 1388 aa16.31■□□□□ 0.2
FUNDC1-201ENST00000378045 GRM1Q13255 1194 aa16.31■□□□□ 0.2
FUNDC1-201ENST00000378045 ANKRD18AQ8IVF6 992 aa16.31■□□□□ 0.2
FUNDC1-201ENST00000378045 MICALL2Q8IY33 904 aa16.31■□□□□ 0.2
FUNDC1-201ENST00000378045 DNAAF4Q8WXU2 420 aa16.31■□□□□ 0.2
FUNDC1-201ENST00000378045 CHMP4AQ9BY43 222 aa16.31■□□□□ 0.2
FUNDC1-201ENST00000378045 VPS33BQ9H267 617 aa16.31■□□□□ 0.2
FUNDC1-201ENST00000378045 ABT1Q9ULW3 272 aaKnown RBP16.31■□□□□ 0.2
FUNDC1-201ENST00000378045 TNIP1Q15025 636 aa16.3■□□□□ 0.2
FUNDC1-201ENST00000378045 COL13A1Q5TAT6 717 aaPredicted RBP16.3■□□□□ 0.2
FUNDC1-201ENST00000378045 DLK2Q6UY11 383 aa16.3■□□□□ 0.2
FUNDC1-201ENST00000378045 PAXIP1Q6ZW49 1069 aaPredicted RBP16.3■□□□□ 0.2
FUNDC1-201ENST00000378045 USP50Q70EL3 339 aaPredicted RBP16.3■□□□□ 0.2
FUNDC1-201ENST00000378045 TTLL11Q8NHH1 800 aa16.3■□□□□ 0.2
FUNDC1-201ENST00000378045 EYA3Q99504 573 aa16.3■□□□□ 0.2
FUNDC1-201ENST00000378045 GLIS2Q9BZE0 524 aaPredicted RBP16.3■□□□□ 0.2
FUNDC1-201ENST00000378045 GGA1Q9UJY5 639 aa16.3■□□□□ 0.2
FUNDC1-201ENST00000378045 G3V3G9 751 aa16.29■□□□□ 0.2
FUNDC1-201ENST00000378045 EGFRP00533 1210 aa16.29■□□□□ 0.2
FUNDC1-201ENST00000378045 HSP90B1P14625 803 aaKnown RBP16.29■□□□□ 0.2
FUNDC1-201ENST00000378045 VEGFBP49765 207 aa16.29■□□□□ 0.2
FUNDC1-201ENST00000378045 HIRAP54198 1017 aaPredicted RBP16.29■□□□□ 0.2
FUNDC1-201ENST00000378045 GCKRQ14397 625 aa16.29■□□□□ 0.2
FUNDC1-201ENST00000378045 FAM161AQ3B820 660 aa16.29■□□□□ 0.2
FUNDC1-201ENST00000378045 TBC1D10BQ4KMP7 808 aaPredicted RBP16.29■□□□□ 0.2
FUNDC1-201ENST00000378045 RBM26Q5T8P6 1007 aaKnown RBP16.29■□□□□ 0.2
FUNDC1-201ENST00000378045 DCAF8Q5TAQ9 597 aa16.29■□□□□ 0.2
FUNDC1-201ENST00000378045 SAMD7Q7Z3H4 446 aa16.29■□□□□ 0.2
FUNDC1-201ENST00000378045 ZNF408Q9H9D4 720 aa16.29■□□□□ 0.2
FUNDC1-201ENST00000378045 CNOT7Q9UIV1 285 aaKnown RBP16.29■□□□□ 0.2
FUNDC1-201ENST00000378045 PSME4Q14997 1843 aa16.29■□□□□ 0.2
FUNDC1-201ENST00000378045 CDC5LQ99459 802 aaKnown RBP16.28■□□□□ 0.2
FUNDC1-201ENST00000378045 MYH16Q9H6N6 1097 aa16.28■□□□□ 0.2
FUNDC1-201ENST00000378045 FOXD4L1Q9NU39 408 aa16.28■□□□□ 0.2
FUNDC1-201ENST00000378045 A0A1B0GUL6 1792 aa16.28■□□□□ 0.2
FUNDC1-201ENST00000378045 XDHP47989 1333 aa16.27■□□□□ 0.2
FUNDC1-201ENST00000378045 H7C1W4 665 aa16.27■□□□□ 0.2
FUNDC1-201ENST00000378045 IFFO2Q5TF58 517 aa16.27■□□□□ 0.2
FUNDC1-201ENST00000378045 ZC3H12CQ9C0D7 883 aaKnown RBP16.27■□□□□ 0.2
FUNDC1-201ENST00000378045 CASP7P55210 303 aa16.26■□□□□ 0.19
FUNDC1-201ENST00000378045 FBXW7Q969H0 707 aa16.26■□□□□ 0.19
FUNDC1-201ENST00000378045 PODXL2Q9NZ53 605 aa16.26■□□□□ 0.19
FUNDC1-201ENST00000378045 CHMP3Q9Y3E7 222 aa16.26■□□□□ 0.19
FUNDC1-201ENST00000378045 ZNF646O15015 1829 aaPredicted RBP16.26■□□□□ 0.19
FUNDC1-201ENST00000378045 POLR2AP24928 1970 aaKnown RBP16.26■□□□□ 0.19
FUNDC1-201ENST00000378045 ASTN2O75129 1339 aaPredicted RBP16.25■□□□□ 0.19
FUNDC1-201ENST00000378045 H7C1D1 291 aa16.25■□□□□ 0.19
FUNDC1-201ENST00000378045 ITGA6P23229 1130 aa16.25■□□□□ 0.19
FUNDC1-201ENST00000378045 KLRK1P26718 216 aa16.25■□□□□ 0.19
FUNDC1-201ENST00000378045 CST9Q5W186 159 aa16.25■□□□□ 0.19
FUNDC1-201ENST00000378045 SLC4A10Q6U841 1118 aa16.25■□□□□ 0.19
FUNDC1-201ENST00000378045 LINS1Q8NG48 757 aa16.25■□□□□ 0.19
FUNDC1-201ENST00000378045 MINPP1Q9UNW1 487 aa16.25■□□□□ 0.19
FUNDC1-201ENST00000378045 CELF2O95319 508 aaKnown RBP16.24■□□□□ 0.19
FUNDC1-201ENST00000378045 DEFB115Q30KQ5 88 aa16.24■□□□□ 0.19
FUNDC1-201ENST00000378045 CYP4F22Q6NT55 531 aa16.24■□□□□ 0.19
FUNDC1-201ENST00000378045 MXD3Q9BW11 206 aa16.24■□□□□ 0.19
FUNDC1-201ENST00000378045 ZNF521Q96K83 1311 aa16.23■□□□□ 0.19
FUNDC1-201ENST00000378045 RASSF10A6NK89 507 aa16.23■□□□□ 0.19
FUNDC1-201ENST00000378045 ADM5C9JUS6 153 aa16.23■□□□□ 0.19
FUNDC1-201ENST00000378045 SNAP23O00161 211 aa16.23■□□□□ 0.19
FUNDC1-201ENST00000378045 FOXN1O15353 648 aa16.23■□□□□ 0.19
FUNDC1-201ENST00000378045 CAPN15O75808 1086 aa16.23■□□□□ 0.19
FUNDC1-201ENST00000378045 ATP2B4P23634 1241 aa16.23■□□□□ 0.19
FUNDC1-201ENST00000378045 IGHMBP2P38935 993 aaKnown RBP16.23■□□□□ 0.19
FUNDC1-201ENST00000378045 BEND3Q5T5X7 828 aa16.23■□□□□ 0.19
FUNDC1-201ENST00000378045 USP48Q86UV5 1035 aa16.23■□□□□ 0.19
FUNDC1-201ENST00000378045 CCT4P50991 539 aaKnown RBP16.22■□□□□ 0.19
FUNDC1-201ENST00000378045 KIF4BQ2VIQ3 1234 aa16.22■□□□□ 0.19
FUNDC1-201ENST00000378045 EPHA10Q5JZY3 1008 aa16.22■□□□□ 0.19
FUNDC1-201ENST00000378045 TXNRD3Q86VQ6 643 aa16.22■□□□□ 0.19
FUNDC1-201ENST00000378045 HELBQ8NG08 1087 aaPredicted RBP16.22■□□□□ 0.19
FUNDC1-201ENST00000378045 BSDC1Q9NW68 430 aaPredicted RBP16.22■□□□□ 0.19
FUNDC1-201ENST00000378045 SCAF8Q9UPN6 1271 aaKnown RBP16.22■□□□□ 0.19
FUNDC1-201ENST00000378045 WDR33Q9C0J8 1336 aaKnown RBP16.21■□□□□ 0.19
FUNDC1-201ENST00000378045 THSD7BQ9C0I4 1608 aa16.21■□□□□ 0.19
FUNDC1-201ENST00000378045 ZBTB22O15209 634 aa16.21■□□□□ 0.19
FUNDC1-201ENST00000378045 MYCNP04198 464 aaPredicted RBP16.21■□□□□ 0.19
FUNDC1-201ENST00000378045 ZNF594Q96JF6 807 aaPredicted RBP16.21■□□□□ 0.19
FUNDC1-201ENST00000378045 PLA2G12BQ9BX93 195 aa16.21■□□□□ 0.19
FUNDC1-201ENST00000378045 GGA3Q9NZ52 723 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms