RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 SSFA2P28290 1259 aa12.48□□□□□ -0.41
HIF3A-205ENST00000377670 CEP131Q9UPN4 1083 aa12.48□□□□□ -0.41
HIF3A-205ENST00000377670 MAGI2Q86UL8 1455 aa12.48□□□□□ -0.41
HIF3A-205ENST00000377670 SSR1P43307 286 aaKnown RBP12.47□□□□□ -0.41
HIF3A-205ENST00000377670 CCT2P78371 535 aaKnown RBP12.47□□□□□ -0.41
HIF3A-205ENST00000377670 EP400NLQ6ZTU2 488 aa12.47□□□□□ -0.41
HIF3A-205ENST00000377670 LUC7LQ9NQ29 371 aaKnown RBP12.47□□□□□ -0.41
HIF3A-205ENST00000377670 ZFYVE16Q7Z3T8 1539 aa12.47□□□□□ -0.41
HIF3A-205ENST00000377670 MAP3K5Q99683 1374 aa12.47□□□□□ -0.41
HIF3A-205ENST00000377670 TSPY3P0CV98 308 aa12.47□□□□□ -0.41
HIF3A-205ENST00000377670 TSPY8P0CW00 308 aa12.47□□□□□ -0.41
HIF3A-205ENST00000377670 SLC12A7Q9Y666 1083 aa12.47□□□□□ -0.41
HIF3A-205ENST00000377670 GOLGA6L7A0A1B0GV03 622 aa12.47□□□□□ -0.41
HIF3A-205ENST00000377670 CCDC194A0A1B0GVG4 234 aa12.47□□□□□ -0.41
HIF3A-205ENST00000377670 GRM8O00222 908 aa12.47□□□□□ -0.41
HIF3A-205ENST00000377670 RNMTO43148 476 aaKnown RBP12.47□□□□□ -0.41
HIF3A-205ENST00000377670 UFL1O94874 794 aa12.47□□□□□ -0.41
HIF3A-205ENST00000377670 HDAC1Q13547 482 aaPredicted RBP12.47□□□□□ -0.41
HIF3A-205ENST00000377670 BMP2KLQ5H9B9 411 aa12.47□□□□□ -0.41
HIF3A-205ENST00000377670 LRSAM1Q6UWE0 723 aa12.47□□□□□ -0.41
HIF3A-205ENST00000377670 ANKRD44Q8N8A2 993 aa12.47□□□□□ -0.41
HIF3A-205ENST00000377670 OTUD7AQ8TE49 926 aaPredicted RBP12.47□□□□□ -0.41
HIF3A-205ENST00000377670 ARHGAP45Q92619 1136 aa12.47□□□□□ -0.41
HIF3A-205ENST00000377670 ERLIN2O94905 339 aa12.47□□□□□ -0.41
HIF3A-205ENST00000377670 HELBQ8NG08 1087 aaPredicted RBP12.47□□□□□ -0.41
HIF3A-205ENST00000377670 DACH1Q9UI36 760 aa12.47□□□□□ -0.41
HIF3A-205ENST00000377670 IFIT3O14879 490 aaKnown RBP12.46□□□□□ -0.41
HIF3A-205ENST00000377670 CCDC144CPQ8IYA2 1237 aa12.46□□□□□ -0.41
HIF3A-205ENST00000377670 CEP57L1Q8IYX8 460 aa12.46□□□□□ -0.41
HIF3A-205ENST00000377670 KLHDC4Q8TBB5 520 aa12.46□□□□□ -0.41
HIF3A-205ENST00000377670 LRRC2Q9BYS8 371 aa12.46□□□□□ -0.41
HIF3A-205ENST00000377670 STX8Q9UNK0 236 aa12.46□□□□□ -0.41
HIF3A-205ENST00000377670 CYP7A1P22680 504 aa12.46□□□□□ -0.41
HIF3A-205ENST00000377670 KSR2Q6VAB6 950 aa12.46□□□□□ -0.41
HIF3A-205ENST00000377670 FAM196AQ6ZSG2 479 aa12.46□□□□□ -0.41
HIF3A-205ENST00000377670 ZBTB40Q9NUA8 1239 aa12.46□□□□□ -0.41
HIF3A-205ENST00000377670 PDE1AP54750 535 aa12.46□□□□□ -0.41
HIF3A-205ENST00000377670 OTUD7BQ6GQQ9 843 aa12.46□□□□□ -0.41
HIF3A-205ENST00000377670 NAA16Q6N069 864 aaPredicted RBP12.46□□□□□ -0.41
HIF3A-205ENST00000377670 ALDH1B1P30837 517 aa12.46□□□□□ -0.42
HIF3A-205ENST00000377670 NLRP5P59047 1200 aa12.46□□□□□ -0.42
HIF3A-205ENST00000377670 PTPN14Q15678 1187 aa12.46□□□□□ -0.42
HIF3A-205ENST00000377670 CEP85Q6P2H3 762 aa12.46□□□□□ -0.42
HIF3A-205ENST00000377670 SH2D4AQ9H788 454 aa12.46□□□□□ -0.42
HIF3A-205ENST00000377670 NEO1Q92859 1461 aa12.46□□□□□ -0.42
HIF3A-205ENST00000377670 PRIM1P49642 420 aaKnown RBP12.45□□□□□ -0.42
HIF3A-205ENST00000377670 MAP3K11Q16584 847 aa12.45□□□□□ -0.42
HIF3A-205ENST00000377670 KRT27Q7Z3Y8 459 aa12.45□□□□□ -0.42
HIF3A-205ENST00000377670 GIMAP7Q8NHV1 300 aa12.45□□□□□ -0.42
HIF3A-205ENST00000377670 EDC4Q6P2E9 1401 aaKnown RBP12.45□□□□□ -0.42
HIF3A-205ENST00000377670 PLA2R1Q13018 1463 aa12.45□□□□□ -0.42
HIF3A-205ENST00000377670 TRPM2O94759 1503 aa12.45□□□□□ -0.42
HIF3A-205ENST00000377670 CCDC178Q5BJE1 867 aa12.45□□□□□ -0.42
HIF3A-205ENST00000377670 TAX1BP1Q86VP1 789 aa12.45□□□□□ -0.42
HIF3A-205ENST00000377670 KCNQ3O43525 872 aa12.45□□□□□ -0.42
HIF3A-205ENST00000377670 ENOX2Q16206 610 aaKnown RBP12.45□□□□□ -0.42
HIF3A-205ENST00000377670 C8orf34Q49A92 452 aa12.45□□□□□ -0.42
HIF3A-205ENST00000377670 IRS4O14654 1257 aaPredicted RBP12.44□□□□□ -0.42
HIF3A-205ENST00000377670 POLR3GO15318 223 aaPredicted RBP12.44□□□□□ -0.42
HIF3A-205ENST00000377670 NEFHP12036 1026 aa12.44□□□□□ -0.42
HIF3A-205ENST00000377670 DCPSQ96C86 337 aaKnown RBP12.44□□□□□ -0.42
HIF3A-205ENST00000377670 DTNBO60941 627 aa12.44□□□□□ -0.42
HIF3A-205ENST00000377670 FERMT2Q96AC1 680 aa12.44□□□□□ -0.42
HIF3A-205ENST00000377670 GGA1Q9UJY5 639 aa12.44□□□□□ -0.42
HIF3A-205ENST00000377670 PPIP5K2O43314 1243 aa12.44□□□□□ -0.42
HIF3A-205ENST00000377670 SMCR8Q8TEV9 937 aaPredicted RBP12.44□□□□□ -0.42
HIF3A-205ENST00000377670 BICD1Q96G01 975 aa12.44□□□□□ -0.42
HIF3A-205ENST00000377670 TRIM37O94972 964 aa12.44□□□□□ -0.42
HIF3A-205ENST00000377670 CALCOCO1Q9P1Z2 691 aa12.44□□□□□ -0.42
HIF3A-205ENST00000377670 ATP8B2P98198 1209 aa12.44□□□□□ -0.42
HIF3A-205ENST00000377670 ATP2B3Q16720 1220 aa12.44□□□□□ -0.42
HIF3A-205ENST00000377670 ABT1Q9ULW3 272 aaKnown RBP12.44□□□□□ -0.42
HIF3A-205ENST00000377670 ZFYVE9O95405 1425 aa12.43□□□□□ -0.42
HIF3A-205ENST00000377670 TNPO1Q92973 898 aaKnown RBP12.43□□□□□ -0.42
HIF3A-205ENST00000377670 TBC1D32Q96NH3 1257 aa12.43□□□□□ -0.42
HIF3A-205ENST00000377670 CSADQ9Y600 493 aa12.43□□□□□ -0.42
HIF3A-205ENST00000377670 LDHBP07195 334 aaKnown RBP12.43□□□□□ -0.42
HIF3A-205ENST00000377670 ZBTB7BO15156 539 aaPredicted RBP12.43□□□□□ -0.42
HIF3A-205ENST00000377670 MFSD6Q6ZSS7 791 aa12.43□□□□□ -0.42
HIF3A-205ENST00000377670 EVI5LQ96CN4 794 aa12.43□□□□□ -0.42
HIF3A-205ENST00000377670 ZRSR2Q15696 482 aaKnown RBP12.42□□□□□ -0.42
HIF3A-205ENST00000377670 NECAB1Q8N987 351 aa12.42□□□□□ -0.42
HIF3A-205ENST00000377670 JAG2Q9Y219 1238 aa12.42□□□□□ -0.42
HIF3A-205ENST00000377670 A1BGP04217 495 aa12.42□□□□□ -0.42
HIF3A-205ENST00000377670 ATF5Q9Y2D1 282 aaPredicted RBP12.42□□□□□ -0.42
HIF3A-205ENST00000377670 GTF2F1P35269 517 aaKnown RBP eCLIP12.42□□□□□ -0.42
HIF3A-205ENST00000377670 BICC1Q9H694 974 aaKnown RBP12.42□□□□□ -0.42
HIF3A-205ENST00000377670 PRKAG2Q9UGJ0 569 aa12.42□□□□□ -0.42
HIF3A-205ENST00000377670 USP25Q9UHP3 1055 aa12.42□□□□□ -0.42
HIF3A-205ENST00000377670 CFAP45Q9UL16 551 aa12.42□□□□□ -0.42
HIF3A-205ENST00000377670 PARP10Q53GL7 1025 aa12.42□□□□□ -0.42
HIF3A-205ENST00000377670 IQCEQ6IPM2 695 aa12.42□□□□□ -0.42
HIF3A-205ENST00000377670 SULF1Q8IWU6 871 aa12.42□□□□□ -0.42
HIF3A-205ENST00000377670 SMARCC2Q8TAQ2 1214 aa12.42□□□□□ -0.42
HIF3A-205ENST00000377670 GOLGA8AA7E2F4 631 aa12.42□□□□□ -0.42
HIF3A-205ENST00000377670 GOLGA8BA8MQT2 603 aa12.42□□□□□ -0.42
HIF3A-205ENST00000377670 CCDC183Q5T5S1 534 aa12.42□□□□□ -0.42
HIF3A-205ENST00000377670 TXLNBQ8N3L3 684 aa12.42□□□□□ -0.42
HIF3A-205ENST00000377670 TSG101Q99816 390 aa12.42□□□□□ -0.42
HIF3A-205ENST00000377670 SPC25Q9HBM1 224 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms