RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 UFL1O94874 794 aa27.89■■■□□ 2.06
SRM-201ENST00000376957 ATP2B4P23634 1241 aa27.89■■■□□ 2.06
SRM-201ENST00000376957 POLLQ9UGP5 575 aa27.89■■■□□ 2.06
SRM-201ENST00000376957 RIMBP2O15034 1052 aa27.88■■■□□ 2.05
SRM-201ENST00000376957 APLP1P51693 650 aa27.88■■■□□ 2.05
SRM-201ENST00000376957 CCDC57Q2TAC2 916 aa27.88■■■□□ 2.05
SRM-201ENST00000376957 CIAPIN1Q6FI81 312 aa27.88■■■□□ 2.05
SRM-201ENST00000376957 API5Q9BZZ5 524 aaKnown RBP27.88■■■□□ 2.05
SRM-201ENST00000376957 TAF1DQ9H5J8 278 aaPredicted RBP27.88■■■□□ 2.05
SRM-201ENST00000376957 EPHX2P34913 555 aa27.87■■■□□ 2.05
SRM-201ENST00000376957 FAM161AQ3B820 660 aa27.87■■■□□ 2.05
SRM-201ENST00000376957 TAF7LQ5H9L4 462 aa27.87■■■□□ 2.05
SRM-201ENST00000376957 ANKRD2Q9GZV1 360 aa27.87■■■□□ 2.05
SRM-201ENST00000376957 KIF16BQ96L93 1317 aa27.87■■■□□ 2.05
SRM-201ENST00000376957 BRPF1P55201 1214 aaPredicted RBP27.86■■■□□ 2.05
SRM-201ENST00000376957 CXCL9Q07325 125 aa27.86■■■□□ 2.05
SRM-201ENST00000376957 MINPP1Q9UNW1 487 aa27.86■■■□□ 2.05
SRM-201ENST00000376957 CCT4P50991 539 aaKnown RBP27.85■■■□□ 2.05
SRM-201ENST00000376957 FOXO4P98177 505 aa27.85■■■□□ 2.05
SRM-201ENST00000376957 EAPPQ56P03 285 aaPredicted RBP27.85■■■□□ 2.05
SRM-201ENST00000376957 CHADLQ6NUI6 762 aa27.85■■■□□ 2.05
SRM-201ENST00000376957 LMBR1LQ6UX01 489 aa27.85■■■□□ 2.05
SRM-201ENST00000376957 LDHDQ86WU2 507 aa27.85■■■□□ 2.05
SRM-201ENST00000376957 HDAC5Q9UQL6 1122 aa27.85■■■□□ 2.05
SRM-201ENST00000376957 COL4A5P29400 1685 aa27.84■■■□□ 2.05
SRM-201ENST00000376957 IPO8O15397 1037 aaKnown RBP27.84■■■□□ 2.05
SRM-201ENST00000376957 NOB1Q9ULX3 412 aaKnown RBP27.84■■■□□ 2.05
SRM-201ENST00000376957 CLEC11AQ9Y240 323 aa27.84■■■□□ 2.05
SRM-201ENST00000376957 DUOX1Q9NRD9 1551 aa27.84■■■□□ 2.05
SRM-201ENST00000376957 RAD17O75943 681 aa27.83■■■□□ 2.05
SRM-201ENST00000376957 RARSP54136 660 aaKnown RBP27.83■■■□□ 2.05
SRM-201ENST00000376957 LEMD3Q9Y2U8 911 aa27.83■■■□□ 2.05
SRM-201ENST00000376957 DBNDD1Q9H9R9 158 aa27.82■■■□□ 2.04
SRM-201ENST00000376957 UTYO14607 1347 aa27.82■■■□□ 2.04
SRM-201ENST00000376957 ECE2O60344 883 aa27.81■■■□□ 2.04
SRM-201ENST00000376957 KCNJ4P48050 445 aa27.81■■■□□ 2.04
SRM-201ENST00000376957 ARHGAP45Q92619 1136 aa27.81■■■□□ 2.04
SRM-201ENST00000376957 COL4A1P02462 1669 aa27.81■■■□□ 2.04
SRM-201ENST00000376957 NBPF7P0C2Y1 421 aaPredicted RBP27.8■■■□□ 2.04
SRM-201ENST00000376957 DOK7Q18PE1 504 aa27.8■■■□□ 2.04
SRM-201ENST00000376957 ZBED9Q6R2W3 1325 aa27.8■■■□□ 2.04
SRM-201ENST00000376957 LTBP1Q14766 1721 aa27.8■■■□□ 2.04
SRM-201ENST00000376957 SPEF2Q9C093 1822 aa27.8■■■□□ 2.04
SRM-201ENST00000376957 USP50Q70EL3 339 aaPredicted RBP27.79■■■□□ 2.04
SRM-201ENST00000376957 GPRC5DQ9NZD1 345 aa27.79■■■□□ 2.04
SRM-201ENST00000376957 SCNN1DP51172 638 aa27.78■■■□□ 2.04
SRM-201ENST00000376957 LDHAL6AQ6ZMR3 332 aa27.78■■■□□ 2.04
SRM-201ENST00000376957 ADARB2Q9NS39 739 aaKnown RBP27.78■■■□□ 2.04
SRM-201ENST00000376957 H7C1D1 291 aa27.77■■■□□ 2.04
SRM-201ENST00000376957 GMPSP49915 693 aaPredicted RBP27.77■■■□□ 2.04
SRM-201ENST00000376957 PODNQ7Z5L7 613 aa27.77■■■□□ 2.04
SRM-201ENST00000376957 SUCLG2Q96I99 432 aa27.77■■■□□ 2.04
SRM-201ENST00000376957 CNNM1Q9NRU3 951 aa27.77■■■□□ 2.04
SRM-201ENST00000376957 MED23Q9ULK4 1368 aa27.76■■■□□ 2.03
SRM-201ENST00000376957 YDJCA8MPS7 323 aa27.76■■■□□ 2.03
SRM-201ENST00000376957 RPS12P25398 132 aaKnown RBP27.76■■■□□ 2.03
SRM-201ENST00000376957 EPS15P42566 896 aa27.76■■■□□ 2.03
SRM-201ENST00000376957 GPR101Q96P66 508 aaPredicted RBP27.76■■■□□ 2.03
SRM-201ENST00000376957 ZNF804BA4D1E1 1349 aa27.75■■■□□ 2.03
SRM-201ENST00000376957 CHRNDQ07001 517 aa27.75■■■□□ 2.03
SRM-201ENST00000376957 EPHA10Q5JZY3 1008 aa27.75■■■□□ 2.03
SRM-201ENST00000376957 USP44Q9H0E7 712 aa27.75■■■□□ 2.03
SRM-201ENST00000376957 PSMD14O00487 310 aa27.74■■■□□ 2.03
SRM-201ENST00000376957 DPF2Q92785 391 aa27.74■■■□□ 2.03
SRM-201ENST00000376957 BICC1Q9H694 974 aaKnown RBP27.74■■■□□ 2.03
SRM-201ENST00000376957 UBTFL1P0CB47 393 aaPredicted RBP27.73■■■□□ 2.03
SRM-201ENST00000376957 FRAT1Q92837 279 aaPredicted RBP27.73■■■□□ 2.03
SRM-201ENST00000376957 COA1Q9GZY4 146 aa27.73■■■□□ 2.03
SRM-201ENST00000376957 CNOT7Q9UIV1 285 aaKnown RBP27.73■■■□□ 2.03
SRM-201ENST00000376957 POTEIP0CG38 1075 aa27.72■■■□□ 2.03
SRM-201ENST00000376957 POTEJP0CG39 1038 aa27.72■■■□□ 2.03
SRM-201ENST00000376957 RABL6Q3YEC7 729 aaPredicted RBP27.72■■■□□ 2.03
SRM-201ENST00000376957 USP17L3A6NCW0 530 aa27.7■■■□□ 2.02
SRM-201ENST00000376957 USP17L4A6NCW7 530 aa27.7■■■□□ 2.02
SRM-201ENST00000376957 USP17L1Q7RTZ2 530 aa27.7■■■□□ 2.02
SRM-201ENST00000376957 CNTROBQ8N137 903 aa27.7■■■□□ 2.02
SRM-201ENST00000376957 VIL1P09327 827 aaKnown RBP27.69■■■□□ 2.02
SRM-201ENST00000376957 MICALL2Q8IY33 904 aa27.69■■■□□ 2.02
SRM-201ENST00000376957 KAZALD1Q96I82 304 aa27.69■■■□□ 2.02
SRM-201ENST00000376957 ZNF594Q96JF6 807 aaPredicted RBP27.69■■■□□ 2.02
SRM-201ENST00000376957 PLIN1O60240 522 aa27.68■■■□□ 2.02
SRM-201ENST00000376957 ATF7IPQ6VMQ6 1270 aa27.68■■■□□ 2.02
SRM-201ENST00000376957 AGBL3Q8NEM8 1001 aa27.68■■■□□ 2.02
SRM-201ENST00000376957 ZBTB12Q9Y330 459 aaPredicted RBP27.68■■■□□ 2.02
SRM-201ENST00000376957 MROH5Q6ZUA9 1318 aa27.67■■■□□ 2.02
SRM-201ENST00000376957 ZKSCAN2Q63HK3 967 aa27.67■■■□□ 2.02
SRM-201ENST00000376957 INTS3Q68E01 1043 aaKnown RBP27.67■■■□□ 2.02
SRM-201ENST00000376957 ZC3H15Q8WU90 426 aaKnown RBP27.67■■■□□ 2.02
SRM-201ENST00000376957 TAF5LO75529 589 aa27.66■■■□□ 2.02
SRM-201ENST00000376957 BCAR3O75815 825 aa27.66■■■□□ 2.02
SRM-201ENST00000376957 GNAI3P08754 354 aa27.66■■■□□ 2.02
SRM-201ENST00000376957 MAP1SQ66K74 1059 aaPredicted RBP27.66■■■□□ 2.02
SRM-201ENST00000376957 ZNF804AQ7Z570 1209 aa27.66■■■□□ 2.02
SRM-201ENST00000376957 HELBQ8NG08 1087 aaPredicted RBP27.66■■■□□ 2.02
SRM-201ENST00000376957 KCNQ5Q9NR82 932 aa27.66■■■□□ 2.02
SRM-201ENST00000376957 RSBN1LQ6PCB5 846 aaPredicted RBP27.65■■■□□ 2.02
SRM-201ENST00000376957 ANKRD44Q8N8A2 993 aa27.65■■■□□ 2.02
SRM-201ENST00000376957 FBXW7Q969H0 707 aa27.65■■■□□ 2.02
SRM-201ENST00000376957 MYO3BQ8WXR4 1341 aa27.65■■■□□ 2.02
SRM-201ENST00000376957 C15orf52Q6ZUT6 534 aaKnown RBP27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms