RNA–Protein interactions for RNA: ENST00000376909.6

SSX9-201, Transcript of Protein SSX9, humanhuman

BASIC

Gene SSX9, Length 591 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-201ENST00000376909 CSF1RP07333 972 aa9.6□□□□□ -0.87
SSX9-201ENST00000376909 GTF2E1P29083 439 aaPredicted RBP9.6□□□□□ -0.87
SSX9-201ENST00000376909 RFX5P48382 616 aaPredicted RBP9.6□□□□□ -0.87
SSX9-201ENST00000376909 CTSWP56202 376 aa9.6□□□□□ -0.87
SSX9-201ENST00000376909 CCDC125Q86Z20 511 aa9.6□□□□□ -0.87
SSX9-201ENST00000376909 ERC1Q8IUD2 1116 aa9.6□□□□□ -0.87
SSX9-201ENST00000376909 KIF1BPQ96EK5 621 aa9.6□□□□□ -0.87
SSX9-201ENST00000376909 TAF1LQ8IZX4 1826 aa9.6□□□□□ -0.87
SSX9-201ENST00000376909 GYS1P13807 737 aa9.59□□□□□ -0.87
SSX9-201ENST00000376909 HCLS1P14317 486 aaPredicted RBP9.59□□□□□ -0.87
SSX9-201ENST00000376909 PTPN12Q05209 780 aaKnown RBP9.59□□□□□ -0.87
SSX9-201ENST00000376909 IFIT5Q13325 482 aaKnown RBP9.59□□□□□ -0.87
SSX9-201ENST00000376909 CCDC57Q2TAC2 916 aa9.59□□□□□ -0.87
SSX9-201ENST00000376909 TPTE2Q6XPS3 522 aa9.59□□□□□ -0.87
SSX9-201ENST00000376909 NBPF5PQ86XG9 351 aaPredicted RBP9.59□□□□□ -0.87
SSX9-201ENST00000376909 COL23A1Q86Y22 540 aaPredicted RBP9.59□□□□□ -0.87
SSX9-201ENST00000376909 NUTM1Q86Y26 1132 aa9.59□□□□□ -0.87
SSX9-201ENST00000376909 TTLL11Q8NHH1 800 aa9.59□□□□□ -0.87
SSX9-201ENST00000376909 RHPN1Q8TCX5 695 aa9.59□□□□□ -0.87
SSX9-201ENST00000376909 BCL11AQ9H165 835 aa9.59□□□□□ -0.87
SSX9-201ENST00000376909 STK32BQ9NY57 414 aa9.59□□□□□ -0.87
SSX9-201ENST00000376909 EP400Q96L91 3159 aa9.59□□□□□ -0.87
SSX9-201ENST00000376909 SCN7AQ01118 1682 aa9.58□□□□□ -0.88
SSX9-201ENST00000376909 ANKRD36CQ5JPF3 1778 aa9.58□□□□□ -0.88
SSX9-201ENST00000376909 BCORQ6W2J9 1755 aa9.58□□□□□ -0.88
SSX9-201ENST00000376909 ANKRD18BA2A2Z9 1011 aa9.58□□□□□ -0.88
SSX9-201ENST00000376909 NFIXQ14938 502 aa9.58□□□□□ -0.88
SSX9-201ENST00000376909 SLC15A2Q16348 729 aa9.58□□□□□ -0.88
SSX9-201ENST00000376909 FAM161AQ3B820 660 aa9.58□□□□□ -0.88
SSX9-201ENST00000376909 ERFEQ4G0M1 354 aa9.58□□□□□ -0.88
SSX9-201ENST00000376909 TAF7LQ5H9L4 462 aa9.58□□□□□ -0.88
SSX9-201ENST00000376909 SLC10A5Q5PT55 438 aa9.58□□□□□ -0.88
SSX9-201ENST00000376909 DEFB132Q7Z7B7 95 aa9.58□□□□□ -0.88
SSX9-201ENST00000376909 C16orf71Q8IYS4 520 aaPredicted RBP9.58□□□□□ -0.88
SSX9-201ENST00000376909 KLHDC4Q8TBB5 520 aa9.58□□□□□ -0.88
SSX9-201ENST00000376909 FAM163AQ96GL9 167 aaPredicted RBP9.58□□□□□ -0.88
SSX9-201ENST00000376909 CCDC85AQ96PX6 553 aaPredicted RBP9.58□□□□□ -0.88
SSX9-201ENST00000376909 SIL1Q9H173 461 aa9.58□□□□□ -0.88
SSX9-201ENST00000376909 CARMIL3Q8ND23 1372 aa9.58□□□□□ -0.88
SSX9-201ENST00000376909 NUP98P52948 1817 aa9.58□□□□□ -0.88
SSX9-201ENST00000376909 RGPD3A6NKT7 1758 aaPredicted RBP9.58□□□□□ -0.88
SSX9-201ENST00000376909 RGPD4Q7Z3J3 1758 aa9.58□□□□□ -0.88
SSX9-201ENST00000376909 NPHP1O15259 732 aa9.57□□□□□ -0.88
SSX9-201ENST00000376909 ITGA6P23229 1130 aa9.57□□□□□ -0.88
SSX9-201ENST00000376909 TM4SF1P30408 202 aa9.57□□□□□ -0.88
SSX9-201ENST00000376909 CCDC152Q4G0S7 254 aa9.57□□□□□ -0.88
SSX9-201ENST00000376909 PLEKHM2Q8IWE5 1019 aa9.57□□□□□ -0.88
SSX9-201ENST00000376909 CLASRPQ8N2M8 674 aaKnown RBP9.57□□□□□ -0.88
SSX9-201ENST00000376909 NLGN1Q8N2Q7 840 aa9.57□□□□□ -0.88
SSX9-201ENST00000376909 GREM2Q9H772 168 aa9.57□□□□□ -0.88
SSX9-201ENST00000376909 ANO8Q9HCE9 1232 aaPredicted RBP9.57□□□□□ -0.88
SSX9-201ENST00000376909 IL1RAPL2Q9NP60 686 aa9.57□□□□□ -0.88
SSX9-201ENST00000376909 PNPLA7Q6ZV29 1317 aa9.56□□□□□ -0.88
SSX9-201ENST00000376909 EYA2O00167 538 aa9.56□□□□□ -0.88
SSX9-201ENST00000376909 CIAO1O76071 339 aa9.56□□□□□ -0.88
SSX9-201ENST00000376909 SASH1O94885 1247 aa9.56□□□□□ -0.88
SSX9-201ENST00000376909 IL15P40933 162 aaPredicted RBP9.56□□□□□ -0.88
SSX9-201ENST00000376909 CNBD1Q8NA66 436 aa9.56□□□□□ -0.88
SSX9-201ENST00000376909 OTUD7AQ8TE49 926 aaPredicted RBP9.56□□□□□ -0.88
SSX9-201ENST00000376909 ZNF594Q96JF6 807 aaPredicted RBP9.56□□□□□ -0.88
SSX9-201ENST00000376909 RTN4Q9NQC3 1192 aaKnown RBP9.56□□□□□ -0.88
SSX9-201ENST00000376909 UBR3Q6ZT12 1888 aa9.55□□□□□ -0.88
SSX9-201ENST00000376909 RTL9Q8NET4 1388 aa9.55□□□□□ -0.88
SSX9-201ENST00000376909 SERPINB2P05120 415 aa9.55□□□□□ -0.88
SSX9-201ENST00000376909 IFIT2P09913 472 aaKnown RBP9.55□□□□□ -0.88
SSX9-201ENST00000376909 SF3B3Q15393 1217 aaKnown RBP9.55□□□□□ -0.88
SSX9-201ENST00000376909 LRRC24Q50LG9 513 aa9.55□□□□□ -0.88
SSX9-201ENST00000376909 ATG9AQ7Z3C6 839 aa9.55□□□□□ -0.88
SSX9-201ENST00000376909 NLRP3Q96P20 1036 aa9.55□□□□□ -0.88
SSX9-201ENST00000376909 C4AP0C0L4 1744 aa9.54□□□□□ -0.88
SSX9-201ENST00000376909 ABCC12Q96J65 1359 aa9.54□□□□□ -0.88
SSX9-201ENST00000376909 POLRMTO00411 1230 aaKnown RBP9.54□□□□□ -0.88
SSX9-201ENST00000376909 MX1P20591 662 aa9.54□□□□□ -0.88
SSX9-201ENST00000376909 PDE1AP54750 535 aa9.54□□□□□ -0.88
SSX9-201ENST00000376909 ST5P78524 1137 aa9.54□□□□□ -0.88
SSX9-201ENST00000376909 DDR1Q08345 913 aa9.54□□□□□ -0.88
SSX9-201ENST00000376909 TFCP2Q12800 502 aa9.54□□□□□ -0.88
SSX9-201ENST00000376909 LDHAL6AQ6ZMR3 332 aa9.54□□□□□ -0.88
SSX9-201ENST00000376909 AACSQ86V21 672 aa9.54□□□□□ -0.88
SSX9-201ENST00000376909 CCDC24Q8N4L8 307 aa9.54□□□□□ -0.88
SSX9-201ENST00000376909 OSBPL3Q9H4L5 887 aa9.54□□□□□ -0.88
SSX9-201ENST00000376909 CNNM1Q9NRU3 951 aa9.54□□□□□ -0.88
SSX9-201ENST00000376909 STAP2Q9UGK3 403 aa9.54□□□□□ -0.88
SSX9-201ENST00000376909 SALL3Q9BXA9 1300 aa9.54□□□□□ -0.88
SSX9-201ENST00000376909 IGHMBP2P38935 993 aaKnown RBP9.53□□□□□ -0.88
SSX9-201ENST00000376909 TNNI3KQ59H18 835 aa9.53□□□□□ -0.88
SSX9-201ENST00000376909 BMP2KLQ5H9B9 411 aa9.53□□□□□ -0.88
SSX9-201ENST00000376909 TTC22Q5TAA0 569 aa9.53□□□□□ -0.88
SSX9-201ENST00000376909 PRR5LQ6MZQ0 368 aa9.53□□□□□ -0.88
SSX9-201ENST00000376909 EAF2Q96CJ1 260 aaPredicted RBP9.53□□□□□ -0.88
SSX9-201ENST00000376909 GPATCH3Q96I76 525 aa9.53□□□□□ -0.88
SSX9-201ENST00000376909 CDC5LQ99459 802 aaKnown RBP9.53□□□□□ -0.88
SSX9-201ENST00000376909 MPHOSPH8Q99549 860 aa9.53□□□□□ -0.88
SSX9-201ENST00000376909 PUS3Q9BZE2 481 aaKnown RBP9.53□□□□□ -0.88
SSX9-201ENST00000376909 GPR108Q9NPR9 543 aa9.53□□□□□ -0.88
SSX9-201ENST00000376909 SEC31BQ9NQW1 1179 aa9.53□□□□□ -0.88
SSX9-201ENST00000376909 CEP126Q9P2H0 1117 aa9.53□□□□□ -0.88
SSX9-201ENST00000376909 RIPOR2Q9Y4F9 1068 aa9.53□□□□□ -0.88
SSX9-201ENST00000376909 PARP3Q9Y6F1 533 aa9.53□□□□□ -0.88
SSX9-201ENST00000376909 FPGT-TNNI3KV9GXZ4 949 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms